SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11997c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_MMS19_nucleotide_excision_repair_protein_homolog_[Bombyx_mori]
Ontology
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016226 P iron-sulfur cluster assembly
GO:0097361 C CIA complex
Transcript
Level		FPKM:5.43 TPM:5.32
ORF EntryO_TrvaFAMAMG15165_complete:A_TrvaFAMAMG_TR11997c0_g2_i1
Sequence
(Nucleotide)
AAATCATCTGGTTTGTCTTTCCAATATTTGGTAATATTTACGTAAATTTTAGTGGTATTT
TACTTAAAATGAGAAAGTAATCTTTAGAATAACATTGCGTTGCTTTAGAAGTAAATTAGT
GTACATTGTGACTATCCAAGCAACATTTTAAATCAATCATGGAATCGATTTGGTTTAGAA
CTGAACTCGCAGAAGAAATAATGAAAAACAAAGAAATATTCGATCAAACACAAAATATCG
TCACCGATATAACATCGAGTACCATGGACATATTGACTCTAGTTGAAAATATGGGAGGAA
TCCTAACCGACAAAGAACCTGAAAATCGTGAAAAAGGAATGAGATTTTTCACGAAAATCT
TAACAGAGCTGCCAAAGGACTATTTAACAGAGGCACAAGTTAAATTTATATCAAAATTTT
ACATAGACAGATTAAAAGATAATCATAGAGTTATACCACCAGTTATTCAAGGCTATTCCG
CTGTAGTTGATATGAAGAATTACAGTATGGAATCTAGTGCTGAATTTTTTTCATTGCTTT
TCCGAGAAGTTACATGTCAATCGCAACTGAGACAAGATCGGAACACAATTTACCTAATTG
TTAAGAAGTTGATTGAAAAAGATGTGGATTACATGAAAACTCTCGGCCCTGATTTTGTCT
ATGGATTTATAGCATCAATGGACGGAGAAAGAGATCCACGAAACTTAATCTTCCTATTCA
ATTTCCTACCAGAATTCATTCGTGAGGTACCCCTCGGTCATTTGGTCGAAGAGATGTTTG
AAGTTATATCATGTTATTACCCGATAGACTTTCATCCAGCACCGGATGACCCTGCTCCGG
TGACGAGACAAGACCTGGCTTCAGCTCTGAGTCCTTGTTTGTGTGCGATACCTGAGTTTG
CGGAACATTGCCTCGTATTGTTGGTCGAAAAGTTGGATTCGAGCTTAAGGTTGGCCAAAC
TTGATTCATTGAGGCTGTTGGCCGACAGTTGTAAAACTTTTAAACCAGAAGCATACACTC
CATTCCTGAAAACATTGTGGTCATCGATCCAAAGAGAAATTTCACATAAAACAGATGACG
AGCTTAAGTTCGCAGCTCACGAGGCCTTGTCCGCATTAGTAGCAAGGTTGTCCAACACAG
CCAACACAGACCAATCTTTCGAAAACTTCGTAAAAGGAATTCTCATAGCCATGCAAACAT
CCATCGCTGAAGCCACAACAGTAGCCCAATTCGTGCAAATAACTAAAGTTTTATTAACCG
CAGCAAATAGTTCCAAAGAATCTTGCTCAATCATAACCAAAATGATGATACCAGCAACGT
TGGCCTATTACGAATTTAAAACGTCACCGAAACTGCAAATAGCCAGTCTCGACTTTTTAG
GCGATTTGTACGATATGGCCAAACATTGGAATGTGTTGGATCAAATATTGGATCAAGTTA
AAGAGATACCTCAACTATGTTTGACAGTTGTTAGTCAACCAATTAAAGATTTCCAAGTAG
CCGGCTTCAGAACACTGATCAGAGTCATCAATGTATTACAAACGGACCTTGTTGTGCCTT
TTGTCGAAATATTAATATACAACATTCAAAATTCTCAAGATGACGAACTTTTGAAAGTGA
GCATTGAAACTGTGCATGCTATTGCAAAGAAATATCCAGAAACAATTATGGATTTGGTAG
TAAAAGGTAGATGTGATATAGAAAATTTGACCCAAGATAAAACAGCGTTGGTCAAACGCT
TGAACTTACTGTCCAATCTTGCAAGCATAGATGAATTTACGAAAATTATTATAGAAGAAA
TGTTAAAGATTGTATCAACGCATGACCAAGAAGCTCCTAAAGTGATAGAATCATTGAGCG
AATCTATGTCAAATGCCAGTTTGTTCTCAGACAAGAAAATAACTCAAATTGACAGTGATC
ATGGTTTAATAGATTCCATTATAAGCTGGATTTTAAAGGAGTTAAATAATTCCCAAGACG
TAACATACGGTTATGTTTTGATAGGTAACACTATGGCAAGTTTACCAATAGACAAGCAAA
GAAAAATACTGGCAAAACATACAGATTCGATTTTTAAAATGTGTTCAAATAACGACGCAT
ACTTTTTGGTTCTAGAAAGTTTGTATAGCTCTATTCATCAAGGAGTTTATGATTCTAATT
TTGAAGATATAATGAGACTATCTTTAAAATTAGCTTTGAATAGTGATAATCAAATAGTAA
GGATGAAAGCATGTATTTTGGTCGCGCATTTTCTAAATAAGGCTGAGTTTGGACAGAAAT
TTGAGCTATTTTACGAGTTACTTAAGAGTTATTTGACGAATTGTAGCAAAGAGAATGAGG
ATTTATGTCCCAAATTGATTTTATTGTACGGGTGGATTACGAAAGCTTTGATATTGAGAG
GGAGTGATACGTTCTTGTTTTGGCTACAAAAGATTGTAAACACATTAACAAACGCAAAAT
ACAGTAAGCAAGCTTCAGAAGCGATTAATTTAATAATGACAGATAGCCCTAACTATTTAT
CTACGAAACAACATTGCCGTACAAGCCTACTTTACAAGCAAAGAATGTTCCAGAATTTTA
CAAAACTAACAGAGAAATTACCCGCTTTAGAAGATTCGACTAAAGAAACTTATTTGTTAA
GCTGGGCTTATGTGTTGAGGAAAACACCTAGGAATGTACTTAATAACGAAATTACTAAGA
TAACACCAATAGTAATAGATTCGTTGGATTACGAAAACAAAGATTTACTGCTGGTCATGA
TCGAAGTTCTATGTTATTTCGTTCAAACGAAAAACGTTCTTATTGCTAGCAGCCTACAGA
CTATTTTACCGAGGCTAGTAAAATTAACTAGATACACCAAATCTATGGACGTAAGAATAA
AAAGTCTAGAATGTCTTTACGAAATAGCAAATTCGTATCGTACTTCTTTACTATTACCAC
ACAAACAAGATATTTTATACGATATAGCGCCATCTCTCGACGACAAAAAGAGGTTAGTCC
GCAACATGGCGGTCAAAGCCAGAACACGCTGGTTTATGATTGGCGCTCCCGGCGAGGACA
AGCCGAACTGACCAATCAGGATCGAGATATACGAAATTGCGCTTTATACAGGGTGTCCCG
AATATAATGTCGAAAATCGTAGGGTGGTTATTTTTGTGGCAGTGTAAAATAAACCATACT
TTAGACTAAGTGATTATTGTATGTGATGCTTGACAACCCTATATTACAAAACTTAGATAT
GTGGTTATTTAATTGTGTAAAAAAAAGAAAAAAGTGAAATATTTTAGAAAATGATTGATA
GGGTTGACACACTCATAATTTTCTACTTCTTTAATCTCCGGTAGCTAATGATCTAAATAT
TCCTTATCTAAGTGTTGTTCAACTTATGCTCTTTATCGATAAACTAAGATAACTTAAGAA
GTTTTAATTATTTGGGACACCCTGTATATGAAACGTGGTTCTTTTATGAATGTGCATTAA
AATGGACAATAAATATTAAGAGGACATTTATATTAAAATGAAATGAAAATAGTTCATTAA
AAATCGTGTTAGTTGCTTACAGTTGAAGAAATAGTAAAAAAAATGATTTTAACATTGATA
(3600 bp)

- SilkBase 1999-2023 -