SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11933c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_homer_protein_homolog_2_[Papilio_xuthus]
Ontology
GO:0003009 P skeletal muscle contraction
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030424 C axon
GO:0035256 F G protein-coupled glutamate receptor binding
GO:0043005 C neuron projection
GO:0043034 C costamere
GO:0044325 F transmembrane transporter binding
GO:0045177 C apical part of cell
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0048148 P behavioral response to cocaine
GO:0048741 P skeletal muscle fiber development
GO:0048875 P chemical homeostasis within a tissue
GO:0051592 P response to calcium ion
GO:0051928 P positive regulation of calcium ion transport
GO:0090279 P regulation of calcium ion import
GO:0097481 C postsynaptic density
GO:2001256 P regulation of store-operated calcium entry
GO:2001257 P regulation of cation channel activity
Transcript
Level		FPKM:1.84 TPM:1.80
ORF EntryO_TrvaFAMAMG14942_3prime_partial:A_TrvaFAMAMG_TR11933c0_g1_i1
Sequence
(Nucleotide)
CCCCAGTGAAAAATTTGGGAAATATGAAGTAAAATATTTTCATTAATTTTGTGTTTTAAA
TGACAGCAGGAAAAGAAACAATGGGTGAGCAGCCGATCTTCACGTGCAAAGCTCACGTTT
TCCACATAGACCCGAAGACGAAACGGTCATGGATGTCTGCCAGTTCAGCCGCGGTTTCCG
TCTCATTCTTCTACGATTCGTCGAGGAATCTCTATCGCATCATCAGCGTTGAAGGGACTA
AGGCGGTCATAAACAGCACGATAACAGCCAACATGACTTTTACGAAGACTTCACAGAAAT
TCGGTCAATGGAGTGACGTCAGAGCGAACACTGTCTACGGACTTGGTTTCGCTTCTGAAG
CTGAACTTGGAAAGTTCATAGAAAAATTCCAAGAGGTGAAAGAAGCAATACAAGCACAGC
AATGCGGCTCGGGCGCCGGTAAGAGCGTCAACGGTAACAGCGGGGCCGCCACGCCTGTAG
CCAGCGCGACCGCCAGCCCGCTGCTGGCCACCAGAGCCAATGACGAACCACCCGCCGTGT
CGCCCGCACAGCCAAATAAACCCGAAAACGATGAAATGATGGTACATCAGAGGGCCCATT
CAGTTTCCTCTACATTACAGGGCGGTGGTTACGCTACAGTAGGTCGGGCCCCCCGAGGCC
CCCTGCCCCCCGC
(673 bp)

- SilkBase 1999-2023 -