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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11930c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-splicing_factor_ISY1_homolog_[Papilio_machaon]
Ontology
GO:0000350 P generation of catalytic spliceosome for second transesterification step
GO:0000384 F first spliceosomal transesterification activity
GO:0000389 P mRNA 3'-splice site recognition
GO:0000974 C Prp19 complex
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0071012 C catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0071014 C post-mRNA release spliceosomal complex
GO:0071020 C post-spliceosomal complex
Transcript
Level		FPKM:5.40 TPM:5.29
ORF EntryO_TrvaFAMAMG14931_complete:A_TrvaFAMAMG_TR11930c0_g1_i2
Sequence
(Nucleotide)
TTTGAAGTTGGTAAAAGTTAGGTTAGTTTTGGATGGTTTTGGAATATTAGAAGCGGACAA
TAATTAAAATAGTTAAATATTGTTCACTGTCTGTAATTTACATAAAAGATAACTTTCTAG
GAATAACGAATTACATTATTTAGTCACAATGGCTCGAAATGCAGAGAAAGCTATGACAAC
ACTAGCTCGTTGGCGTGCTGCTCAAGTACAAGAAGCAGGTGGCCAACGTGAGAGACGCCC
CTATCTTGCATCCGAATGTAATGACCTACCCCAGGCCGAGAAATGGAGACTACAAATAGT
AAGGGAAATCGCAAAGAAAGTAGCACAAATACAGAATGCCGGGTTGGGAGAGTTCCGAAT
ACGTGACTTAAATGATGAAATTAACAAATTGATGAGAGAAAAGCGGCATTGGGAAGTCCA
AATCAAATCTTTAGGTGGGCCGGATCACGCTCGAGTAGGTCCTAAAATGTTGGACCAAGA
TGGTAAAGAAGTTCCGGGCAACCGCGGTTACAAATACTTTGGAGCTGCAAAAGATCTACC
AGGCGTCCGTGAGTTATTCGAGCAGGAGCCCCCTCTGCCGCCGCGCAGGACGCGAGCCGA
CCTCATGCGTGACGTCGACGCGGACTACTACGGGTACAGAGATGACGACGACGGTCTCTT
GTTACCGATCGAAGAGGAAGCTGAGAAAGCAGCGATAGCACGCGCTGTTGAGGAGTGGAA
ACAAAACAAAGACCTTAATAATGATGAAGAAATGCCTGAAGAAGAGAATATTTATCCAGA
AGATCCGGATGATAAAAGAATGGAAGATGACGATGATGATTCAGCTCAACAAACAATATC
ATCCCACGTGGCCGTGCCCTCACAGAAGGACGTTGAGGAAGCATTACTCAGGAGGAAAAA
ACAGGAACTATTGGAGAAATATGGATGTTTAGAAGCAAAACTAGAAAAGAGCTGACGGAT
TTTTTTATTGTATTATTTTAATTTATATTCATAAGGAAAGAATTAAATATAAGTTAAATC
ATATTTATAGTTTCATTTTTTCGTTTATTTTGACTTGTTGAGTTAGTTACGTCTTCTAAA
TCGGGGTATTCTTATAACAAATGTATGTTGATATAAGAACGAAAA
(1125 bp)

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