SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11921c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_RNF13_isoform_X2_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0045786 P negative regulation of cell cycle
GO:0046872 F metal ion binding
Transcript
Level		FPKM:24.01 TPM:23.52
ORF EntryO_TrvaFAMAMG14908_complete:A_TrvaFAMAMG_TR11921c0_g1_i1
Sequence
(Nucleotide)
ATTTTCATTCATAGTTTCATTTTGTTTAATTTTCAAAATTAAGTTTCAGGCAACTAAAGA
AATATCTGTGATTGTTATTAAAATGAAAAATACATAGTTTTAAAGCTAAAATATTAGTGC
GCTACAACAGTTTTAAATGTGATTTATTCTTCAATTAAAATGTATTTATAGTTTCGCTGT
GTAATATTTGCATTTTGTGCTTTGTGCGGACATCTCAATATATTTAATATTACACACGTG
ATCCAAGGACGAGGCCTGTTTTTCAACAAACAGAATTAATGTAAACTGTGATACACTAGT
TTCTTGAACACTGGATATTTGTACTGATTACGAAACGTTATCAATACTTCCTTCTATACT
TCAAACAATGTCTACGATTTGCTGCCCCAACGAATCAGCGAGAGTATGATAGACAGAGTT
CAGTACATTTGTGATATAAAAAAACTAATTCAAAATGCTGTCGAGAATCATGATAGTACT
ATTCGGCTTCTTCACAACGGTCTGCTGTAATATAGTTGTGTATACAAGGACAATACCGTA
TACTATAATGGACGAATACCGCGACATACCGGCCAGTTTTGGTGATGAGCTGCCTCTGGA
AGGTCTACGTGGTTACCTGGTGCAGGGCGAACCTTCAGACGGTTGTACGGCGATGAGTCC
ACCCCCCACTATCCCGGAAAACACGGAGAAATGGATCGTGCTTGTTGCCAGATTCAACTG
CAGCTTCGAGATAAAGGTCCGCAACGCGCAGGCAGCTGGTTTCGATTGTGTCATAGTTCA
CAACGTCAACTCCAGTGAACTAGAGAAAATGTCAGCGAAGAACCCTGAGGGTATTACGAT
ACCATCAGTGTTCGTCAACGACGTGGCAGGCGAGGAGCTGGCGTCCGATTACCAATACAA
TAACGGGTTCTTCATAATGGTGAACGGTGACTTGCCGTTCAATATCAACACGCATCTGCT
GTTACCGTTCGCCATTGTGGTCGTTTTGTGTCTGTTCGTCATATTTATATTTATGATAGT
AAAATGCATAAAAGACAGACGACGAGCCCGAAGGCACCGGCTACCGCACCGCGCCCTCTC
CAAGATACCGACCTGCAAGTTCAGCAAGGGAGATCCCTATGACACCTGCGCCATCTGCCT
TGACGACTACCAGGACGGGGACAAGCTGCGGGTGCTACCCTGCGCGCACGCGTACCACAG
CGTGTGCATCGACCCGTGGCTGACGCAGAACAAGCGCGTATGTCCGGTGTGCAAGCGACG
CGTGCTGTACGCGGGCGAGCGGCGACCGCGCAGGACGTCCTCCTCCGACGAAGACTCCGA
CACCGAGCCGCTGTTACCGCAACAACAGGAGCAGATCGGTGGAACATTTACTGAACAAAG
GGAGAATCCATTCGTGCGAGCCGCGAGGTTCATGTCGAGATTACGAGCCAGGAACAACCA
GAATAATACAGATGCAGAGATTCCGCCTTTATTAGAGGAAAGTCAAAACTCAACTGATGA
CGACGAAGTTATCGATAACCGAGGAGTACAGCCATTGTTAGAAGGACGCGCACCACACTC
CATCAACGGATCCTCGCGCGGGGAAATAGGTGTAGCCGCATTACCAGCGCCGACGTCTCG
TTCATTACCGCGTTACATAGATTTATGAACTGCACAAACTAAATAAACGAAACTCAATAC
ATAAAGTACTGTTTTTATTGTTGTGATACCGGCCATATTGGATACATTATACAACGTACA
ATCAGACTTATTATTTCAACTATAAAGGCGAAATTCGATTGCATAATTCAGTGATGTAAT
TTGGTACTTACTTTTTTAATCACTCAACTGGGATCAGCAACCAAATTGGTTTGTTAACTT
TTGCCAAGTCTGTGG
(1875 bp)

- SilkBase 1999-2023 -