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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11861c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:35.11 TPM:34.40
ORF EntryO_TrvaFAMAMG14831_complete:A_TrvaFAMAMG_TR11861c0_g1_i1
Sequence
(Nucleotide)
CGCGAACGGATGGTTGTTTCTCATCAGCGTTAGTAACGTAATGAACTGTGATGGTTTCCG
TTGGCCCGGATCCAATTGAGGCATAACAAAAATCGCATGTACGATGCGCGATGCTGTGAT
GTGTCTGGCGAGCGTAGGTGCGTCGTTGCGAACGTAGTATCAATTGTGTAGTTTTTGTTA
TCACTTTGTTGTCGAGAGTGGCGCGGCTCTGACGCGATCCGCCCGCGCACCGAGCCAGCC
GCACGCCACACAACACCAGTCCGCGCACGCGCCGGGAGCCGCGCGGAGTTCCCGAACAAC
CAACCAACCAACCAACACGAACAACAACCGAACGCTTTCGAACGAACCTTCACGCGACCG
CTGCCCATCTCAGGACCATCGACCGACGATCCACAACCTTGTAGTGATCATCCTCCCGAA
TCCTGAACTCAATCGATCGACACTGCCTGTCGGATATACGGGCTATTTATAAAATTCCGC
CGTTGAGAGAAATGAGACGTAATTTGTTGGTGGTTTTGCCAAGTTTGCACTGAGATTTGC
AGATCGCTTTGAAGATAGTGATAAATGCTGTATATAACGTGTAAATATAAGGTTTCATTG
CTGTAGTGAGAGACAAGTGCGTTTGAGTTATCTGGTGTATTTTGGATTTTGTTTGAACAT
ATTATCAAAAATGGTACGAGGGCGTTATTCTACTTCTGATATAGGAGCATTGGGCGTGGG
CTACGCCAGCGTCGGTCTCCAACACTCTCGGTCGGCGGTGCTGCACGCTCAAGTACCGCC
GCACTACCGGCCCGTGATGCCGCCTCATGCACTCCTCAACAGCGCTTCCAGTGGCAATGT
GCCGCATGCACAGGGACCACGAGTGCACTTCAAACTACAGCCACAGACCATCATTCCTGA
GAAGAAGAAGTCTCCGCCATCATCGTTAACCAATGGCAACGGGAAGAGCCTCCGTCCGCA
GTCGTTCACACCAGGTCTGAAGAGATCTAAGTCGTTGACATCGGCTGATGCGCTGGCGAG
CGGTATGGCGGCCCTGGGGTTGGCTGCTGATGCAGGAGACCTTGGGACATTCCCGGCTGA
GATACAGGAGTGTATCGATAAGGCTCTTGAAGATCCGAACGCAGTAACCGCCCGTACATT
AATGGACGCGGTAGGACACCTGGTGTCTCGCGCGGTGGAGTCCCCGCGCTACGCCCTGCC
CGCTGCGCGTCGGTGCATCGCCGTCGTGGAGCGGGAGCAGACCGAGACCTTCCTGGAGTC
GCTGTTGAACACGTGCCAGCAGTGGTACCATGATAGGGACAAGTTGTTGGGCGCGATGAT
CGGCGGCGGTCGTCCCCGGCTCATGGCGTTCCTCTCCTTCCTGCTGGAGATGTACTGTCA
GCTGCGACGTCGCGCCATCCAGCGGCGCGGGGCCAGCGCTCAGCCCGGACACGTGCTGCT
CGCGCTCATCTGCAAGTGCTGCGAGGACTGCATCCGGCAGCCGGTGCCTTCCGCCAGCGA
CACTGAGAACCTGTTCTTTGTGCTGACATACATCGGCCGGGACCTGGAGTCTCAACTCCC
CGGAGACCTGGAGCGTCTCCTCACAGCTGTCCGCGACGCCTTCCTCAACACAGCAGCCGC
CCCTTCCATCAGACGCACCCTGCTCCAGCTCATAGAGCTTCACGCATCTCGCTGGCAGCT
TCCCGGCTGTGCTGTACTCTACTACTACCCCTCATCTAAATAATAACAAGTGAGTACTTC
TGGGACACAATAAAACCCCTATATCATCTCTCGACTGAGGGACTTCCCTGTGAAAACGTG
GGTAGTTTGAACTTTGTAAATGTACCCCGTTTCAGAACAGGCATGTTGGATGTCACTCTA
GTACTGTTGCGTTTGTACAAGATTGTCCTCTGTTGTAGGCATGAAGCCGTAAGCTCATTA
TTGTGCCTTTGATTTTGTTAGATAACTAACACTTGACATCACTTTCGTTTAAGACTACAA
AAGTGTTGTAAAGTGGAGTATTTTAAGGTTTTATTATAGCTTAAGGTGGATAGGATCTAA
AGCCTTGAAAGTATTAAAGTACTGTATTTAGTTTGGACAAGTTGTCGATGTACACTACTG
TACGGTTCTCGCATAGTACTTCGTGCATTGTACCCTTTTGTCGCGATAACGTTAGGTTTA
CATTGCCATCTATTACTAGCACTAAATATTATTATTGCTTATGGTATCGTTTTACTAGGA
TCCAATTATGTTTAGTTTTTAAGTTACAATGCACTATTCCCAACATACTTAGTAGTTCAT
TGCACTCGGGTAGTGATTCACATTTTTTTAGTTTTGTTTCAAAATTGTATTAAAAGTTTG
ACTGAATTATTTGTGAAAGTGAAACTATCTCTTTTTTATGCTTGTGATATTATAAATTTA
AGTATCTGATATCTTTTCTGTCCTAACCAAAGACTGTAATGAATGGGATATATCATTTAA
TTTTTTATTAACAAATTCGTTGAAGCTGGACCAAATTTCTCGTTTCAAATTGGTTAAAGT
AATTGATGTTAGTATGTAGTTTTAGATTGCTCTTGTAACTGTCATATCAAGTTAATGTAA
ATTATAAATATGGGAAAATATATAAAAAGACCGTTGATTTTTCTTAATAATGCATTCTTA
GCAATTTAAGTTAAAAATATGTTTGTAAAAAAATCTAAAAGAACAAAAAAAATGGTGCTA
ACAAAAGAGATATTGGTGTATTGTATCTTTATTCATAGTTATTATATTACGGGCAATAAC
ATTATTCTTGTTACCGCTATATTTTTTGTATGAATAAAACACTTAAAGGATTATAACAAT
AAAAATATTATAAAAAAAAAAAAAAAAAAAAAAA
(2854 bp)

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