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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11836c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ABC_transporter_G_family_member_20_[Papilio_polytes]
Ontology
GO:0001666 P response to hypoxia
GO:0001837 P epithelial to mesenchymal transition
GO:0001935 P endothelial cell proliferation
GO:0002040 P sprouting angiogenesis
GO:0004720 F protein-lysine 6-oxidase activity
GO:0005044 F scavenger receptor activity
GO:0005507 F copper ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016641 F oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
GO:0030199 P collagen fibril organization
GO:0032332 P positive regulation of chondrocyte differentiation
GO:0043542 P endothelial cell migration
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:81.86 TPM:80.21
ORF EntryO_TrvaFAMAMG14796_complete:A_TrvaFAMAMG_TR11836c0_g1_i1
Sequence
(Nucleotide)
TGAATTCATTTTGAGAGAAAGTAAAAATTTACAAAGAAATTATAAAAGAAAGTAAAAATG
TTTTAACTATAGTAACAAGTTTCACTTTATGTATAACTTTTTAAACTTTAAACGATGAAT
GTGTTAAATTTAGTTTTAGTTTTAATTTTGATTGAAATTTCGGGAGTTTTGAGTAAAATT
GTGAGTGAAAAAGAACGAGCTAGTAGAGCAGCTTTTATTCAGAGGTTATTGAATAAACGC
AAGTATCTGGACGGTAGAGTAAAGTTGGTTGGCGGGAATAAATATGAAGGCAATGTGTAT
ATCTACCACGCTGGTCGCTGGGGAGCGATATGCGACGACTCCTGGGATGATGCAGCGGCT
CAAGTTGTCTGCAATCTGTTTAACAGAACCGGTACGGCTACCCATGGATCACAGTATGGT
GTAGCTAAAGAAAAATTCTGGATGGACGACGTAGTCTGCCAAGGAGATGAAGCCACCATC
ACTCAGTGCATCTTCTCTGGATGGGGGTCCTCTGACTGCGAGTCTTCAGAAGCAGCGGGG
GTTAAATGCCGCAAAAAAGACACTTATGTCCCCCAAAACCTTTCTGTAAAGAAGAAAAAA
GGGGCCAAGTTGCATGAAGTCTTGGATATCAGGTCTACCAGTTTGAGAATCGTCGGTGGT
ACTACTGCTACTGAAGGGAGAGTGGAGATATACATCAACGGTGTCTGGGGCAGCATATGT
CCAGATGGATGGACGCTCTACGAAGCCGCTGCAGTCTGCCGACATGTGGCATTAGGCCAT
GCTAAACAGGCATTGCAGACGGATTACTTCGGGAGCTCCAAAGTCGTTCTCAGCGGTGTG
GAGTGCCAGGGAAATGAGACGAATTTACTGCAGTGTAGACACCAGGAGTATGGAAACGTT
GTGTGTCCTGGAGCAGCAGGACGTGTGGCAGCAGTAGTCTGTACAGATAAGCTAGCTGAT
TTGGAGCTGGACACAAGAGCTATAGAACAATCAGCCCATTTACAGGATGCTCCGATGTAC
TCACTCACTTGTGCTATGGAAGAGAATTGCTTGACTAAATCTGCTTATGAGATTCAAAAG
ACGAACCCAAATTGGCAATACGAGACAAGAAGGCTATTGCGTTTCACCGCGGCTTCTCTC
AACATCGGTAATGACGAGTTCAGGCCTTATTTACCGAAACATTTGTGGCAGTGGCACCTA
TGTCATATGCATTACCACAGCATGGAAGTATTCGCTACCTTCGATGTCCTGGATGCATCA
GGCCGAAGAGTCGCTGAAGGGCATAAAGCCTCGTTCTGTTTGGAAGACAACACTTGCATG
ACAGGAGTGGAGGAGAAGTTCTCTTGCAAAAACTATGGAGATCAAGGAATATCAGTGAAC
TGCTCTGATGTTTATCACTTCAGTATTGACTGTCAGTGGGTTGATGTCAGCGACGTGGAG
CCTGGAGATTATACCTTTAGGGTGGCTGTAAACCCTCATGCAAGGATAGCAGAGCAGAAT
TATCATAATAATGCAGCTTCTTGCAAATTGCGTCTTGCTGAAACTTATGCGGCTGTGTAC
GGGTGTGAACGAGAGAGACCATAGTATCGTGTTTTTTTTCTTTTAATGTTAAATGTGCAA
TTAAACATTATTGAAAATAAGTCCTTATAATAAAAAGCTGAAAACTTTGTTTGAACACAG
TATACTCAGCAATCGCTGGTCCGATTAAGAAAATTAATTTAGTGTTGGATAGTCTGTTTA
TCGAGAAACGATAAATTAAATTAAAATTATTGCATTTTTTTTACTTACTGGTCCATTGCT
GAGAATGAGCCTTTTTTGTTTTTTGCCTCATAAATTTGCCTCTTTTTAAAAAAACACCTT
TCAAAATTAAAATACCTATAGTAAAAAGAAAAACATAATTCATTGAAAACTTTTATTTAT
TAATTCTTACAATACATATCACAATTGGTCATTGCATGTTAACCTAATTTTAAAGATTTT
TCATTACTTAAAAATCAGTTTTTGTACTATAAATAAAAATGAATGTATGTCTTTAAAAAT
AAAATATTTAAAGAATTACTGCAAATGTTGTTGTAATTTATTTTAAGTTTAATTTTTGTT
ATTTTTTTTTAAATAATAAAACGTTTTTTTTTTTATTATATTAATTGAGCAATAAGTACT
TATAAAACAAAAATATTACAAAATCCTTTTATTCCAGGTTACTTATATTCTAAAATTAAT
AATCACTAAAATAAGTACTAAAAACTAATAAACTAAACCCCCTATAACAATAAGCGTAAA
ATAAATTAATCCACAATTTTTAGATTAATATTTTTTTCAATTTTTACACATTAAAATCAC
TTTTTATTTTAAGTAGTGAAAAAACAATATTAATAATTGTATCATTTCTTCAAGAAAAAG
AAACATCTGAACGAGTTACATAAAGTTCTAAAAGTTACAATCCAAACAAATTTGACACGC
AGAAAAATTATTAAATAAAAAAAAAATGTTTTACTCGTTTTTAATTGTCAATTCAAATTA
CTTATCAAATTGCTTGATTTAAAGTACTCAGTAAAGCTAAAATAGAGTCATAATTTTTAT
CATCTATTTTCCTTTGTCAACAAAACATGCTATCTAAATCCAATTTCCATTCTTCATTTA
TATTACAAATTTTGGGAAAAAAAATCACTAAACTATTTCTCAAAAAATATACTCCCAATT
TACAGTTACTTTTACAATTTACTTCACACTTATACTTATACCTAACCCTTCTTAAATTTA
AGTAATAATATACTAGCTGTCAAGTATATAGCTATCCAGATCCCTGTCGATATGAACCCG
GAGTAGACTGTGGGTACTTGTATATGCCACCCCCTTTGAAGCATCGAGCGAAGAGACTCC
GTAGACTTAGTGAGGGGGAGGATGTAACTGATCCATTGAAGGATGGGATGCATACCTTCA
ACCGGCCAGATAATTCCGCAGAGTAGTACCATCGGTAAGAACGACCCGAGAGCCAAGTAT
GTCGCAGTTCTGTCTGTGTCACATACGCAGGATACCACGAAACCGAAAGTCATTCCACAC
AATCCAGTGATCAACGTCAAGAATATGACCCAGCCGATAGGCCCACGCATCGTCAGTCCA
AAGAACACGAATCCAATCACAAGGACAGTCACAGACTGAGCTATCATCACCAGCATTTGT
ACTGTTACGTGCGAGAATAGGATCTCAGTACCAGTAATTCCCGATACAAGAGTTCTTTCC
AAAATTCCTTCATTTCTTTCAGCCAACATCGACCCTGAGGTTAAAGCGACCGCCAAGAAA
AAGATAATAGTTAAAATAACTCCGGGTCCAGCAAAATCTGTGAAGTTAGCGTCGTCTAAA
CCATAGATAGGTTGATGGAAATAGACAGGTATGGACATTAATCTCGATGGTAAATCACAG
ATCTTGGCGAGTTGCTCCGTTGCTTCCATGAAAGCTAACTGAAGATCACGACTCAGCATC
CATTCAACTTGTTTGTCAGTATCATCCATGTGAATCTCGATGTCAGAATACATGATGGTA
GCGTCATCAGCGCGACGCGGCGTGATAATCCTCTGCTGGAGACACTCGGAGAAGTTGGCT
GCGAAGACTAGAACCACTCTTGCTTTGCCATGACGAGCTTCGTACATCGCTTCTTCTTCG
TTTTGGTATAATATCAAATTATTCTGCCGTTTTGACAAATAATCCAAATATCTGCAACTG
AAGTTTGTCAAATGCCAATCATAAGAGCTGTCTTGGGGACACTTGTTCTTATCGTAATAG
CAGAGAGCGTTGTTGCTATGAGACTCGTGGTTGACTACCGCTATGGGAAGACCGACGGGG
TAGTGTCCGATTGCAAGACAAAATAGTATCATTTGGGATAAAGGTAATCCCATTATGAAG
GCTAGGACGCCGAAATTCCTAAACAGACTCCAAAAGTTCTTCCAAATAAGAGCCTTCATA
TGATGCCATTTCATAGGCGATATCATTTCCATCCTAGATTTATTGGGTTTTTCTTCTGGT
GGAATAGCTTCGACCGGTAGTGGTAAGTCTGGTGCTACCACCACGCGTCCCTTGCTGCTC
ATAGAGACGTTGTCTCCGAATTCACCGGAAATCTCGCCTACTTCCGCTTCTTCCAAATCT
ATGGCTGATGGGTCAGGCATAGTAGGAAGCTCAACCTTTTCCACGACATCAGCAAGAATA
CTAGATCTCCTACGTTTGCCCAAGTTCTGTAACACCGACAGTTTGAGAAACACCTCCTCA
AGACTTTCAGCGTTGTAGCGACTGATTAGCTCGTTTGGAGATTCTTCAGCTAAGAACCTT
CCACCTCTCATTAGCCCAATCATGCTAGCTTGTTTAGTTTCGTCTATGTAATGAGTAGTA
ATAATGACTGTAGTACGACCTTCTTTCGTGATGTCCACTAAATGGTCCCAAATACTTTGT
CTAAGAACAGGATCTACTCCGACAGTTGGTTCGTCTAAAATAAGTAGCTCAGGGTCGTGG
ATAAGAGCGGCTGCCAAAGATGTCCTTCTTTGTTGACCTCCTGATAAGTTCTTCACTTGT
CTTGTTGGGTTGGGTAGTTGCAGTAATTTGATGAGGAAGTCTATCCGTTCTTCTACTTCC
GGTGTGGTCATGTTGGCTATCCAACCGAAGTATATCAGAGTCTCTCTTATAGAGAACTCC
CCGAAGAGAGCCACTTCCTGCGGCATATATCCTATCCTAGGTCCAGGAACTCCACTTCCA
GGGCTTCCAGGTTTCCCACCCAGCACCCAGATCTCACCAGAATTCAGTCTTCTTCTACCC
ACAATACAAGAAAGCAGCGTAGTCTTTCCACACCCAGAGGCACCCAGGAGACCGTATATG
GCTCCTTTCGGCACAGTCATGTTCAAACCATCCAGAATTACATTTGGTGTTTTAGCTGTC
CCGTATCTCTTATGAGCTCTTCTGACACAAACGGCTTGCTGTCTTCTAGAAGCTACGGTA
GACTTCTGAGATTTGAACATTCTATTCCGTCTTGCTATTAGTTCTTCTTCGATGGTACTG
ATGGTAATAGGACGGTCATCCTCGCGGACATCTTCCATGGAGATTGTGGCTCCTTCGTTG
TCGTAGGCTGGCATTTTTATTATTATTATGGCAACTCAAGATCCTAGATTACACATAAAT
TCACACACACTGGCCACTAACAAAAAAAAACACTTTCGTAATCCAACGAGTTTGTTTACA
AAAAAATTAAAAATATTTGAATTTCGAACCGCGCGCTGATCACCG
(5265 bp)

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