SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11820c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_histone_transcription_regulator_slm9_[Papilio_xuthus]
Ontology
GO:0001673 C male germ cell nucleus
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0035041 P sperm DNA decondensation
GO:0035042 P fertilization, exchange of chromosomal proteins
GO:0042585 C germinal vesicle
Transcript
Level		FPKM:1.55 TPM:1.52
ORF EntryO_TrvaFAMAMG14769_3prime_partial:A_TrvaFAMAMG_TR11820c0_g2_i2
Sequence
(Nucleotide)
TAAAACTTTAAAACCATCTTTTTTGTTGTTAAATACGCAAAAATATTGCTAAATGAAGCT
ACTAAAACCCAGTTGGGTCAACCACGATGACAAACCTATATTTTCTGTGGATATACATCC
TACTGGGAAGTATTTTGCTACCGGCGGGCAGGGTGGACTATCCGGCAGAGTCGTGGTATG
GAACCTGAATCCAGTGTTGTATGAATCTGTGGAGCTTGACCCAAATGTACCGAAAATGAT
TTGTCAAATGGATAACCATCTAGCATGTGTAAACAGCGTAAGATGGAGTAACGGAGGTAA
GTACCTGGCATCCGGTGGTGACGACCGACTCATCATGGTGTGGGGCCTCAGTGTGGTACC
CAGCGCACCTGGCACCAAGCAGAAGGCTGAAACTTGGAGATGTGTCTCCACTTTGAGAGG
ACATGCCGGTGATGTCCTCGATCTAGCTTGGTCGCCGTTAGACAAATGGCTGGCCAGCTG
TAGTGTTGACAACACAATCATTATATGGAATGCTGAAAAGTTTCCGGAAATGGTTTCAGT
GCTCAATGGACACACTGGTTTAGTTAAAGGAGTTACGTGGGACCCAGTTGGAAAGTATTT
GGCATCTCAGTCAGATGATAAATCTCTAAGACTTTGGAAAACTTCTGATTGGGCACAAGA
AGCACTCATTACGAAGCCTTTTTATGAATGTGGAGGAACAACCCACGTGCTCCGTCTCTC
ATGGTCTCCGGACGGTCAGTACGTGCTGTCCGCGCACGCCATGAACCGCGGCGGGCCCAC
CGCCAGGGTGGTGGAACGGGACGGCTGGAGATGCGATAAAGACTTCGTCGGACACAGGAA
AGCTGTTACTTGTGCTCGTTTCAACAGCAACATATTCGTAAAGGAAGGCAAGAAGTGTTG
TTGCGCCGCGCTCGGGTCACGTGACCGCGCGCTCAGCATCTGGCAGACCTCGCTCAAGAG
GCCGCTGCTCGTCATACACGACCTCTTCAGCGATAGCGTGCTCGACATATCTTGGAGTTC
CGATGGTCTAAACCTCTTGGCTTGCAGTTCGGACGGGACGGTCGCCTGCATACAATTTGC
GAATGAAGAAATCGGTACACCACTCACTTTAGAAGAAAAGAATGCCTTCTACGAGAAGAT
ATACGGTAAAGTGTTGGCTCACGAAACTGGAGGGGATTTGTCTTCTAACTTACTAGTGGA
GTGTCCTGAGATACTGCTCGCTAGAGAGAAACAAGAGGCCAAAAAAGAAGCAGCTGCGAA
AGAGGAGTCGACGCCTAAAAGCGATAAATCACAGAGTGCACCAATAGCGAGATCATCTCC
CGTGTCGCCGGCGCCGCTGCGGCCCACCGACCGGCAGATAGAGACGCGCACGTCGGACGG
CAAGCGACGCATCACGCCCGTCTTCATACCGCACTCGCAGCTAGACGCCAACGAATCCCT
AGGTTCCCAGCCGGGCGGTTCCGAGAATTGCTTCAGTACATCGTCGCAGAGCAAGTCCAG
GATACGCGTGGAAGTCAGGGATGATATAGTGATACACCCCAACGTCAGCAATCACTCCAT
ATCGGCGCTGCAGAACAACTCCAGGACCTCGGATAACGGCCTAGATAACAGACTCCGCAA
GCGCACCGCGTCCTCCCTCCCCGGGCCCCGCACCGACGACATCGTGCACAAGAAGGCGAA
GGGGGCGGGGCCTGGCGCTTCTACTGCGACCCCCGCCCCCGCCATACTCCTCCCCGCGCC
CGCCCTGGGCGTCGCCGGACCCGTGGTGCGAGCTGCCGGACTGTTGAGACTACAGGTAGT
AAACAAAGCGTACAACACACATTTCGGTACTCTATCGAGACTGCAGCTCATACCGAACAA
CTCGGCATCGAGCGATCCTGTCTGGGAAACTTATCTAGGTTCCCCGGTGTCGTGCATCTC
GTGCGACGCGCGCTGGGCCTGCGTGTCGTGCGCGGACGGCACGCTCCACGCGTGGCGGAT
ATCCAGGCAACACGCCGCCCGCGCCATGCCGCCCATAGCACTATCGTCCCCGGCCGCCAA
GCTAACACTGTCCGGCGACACGCTGGGCGCCGTGACGGTGACCGCCGAGCTGTCCATATG
GAACCTGTCCGCGGCGGAGTGTCTCGTGCGACCGCTGTGTTTCAGATCCTTGCTCACTCC
TGGAGCCACGGTGACGAATTGTTCTCTACTGGAAGATGGGAATCCATTGATCTCGTTAAG
CAACGGAAAGACTTACATATACAGTAAGAAACTTTGCGCTTGGGTGGTGTGGAGCAACAC
GTGTGACCCGGTGTGGCGCGTCAGTGCGGGTCTGCCTGCCA
(2321 bp)

- SilkBase 1999-2023 -