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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11817c0_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_Hakai-like_[Amyelois_transitella]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0007162 P negative regulation of cell adhesion
GO:0008270 F zinc ion binding
GO:0016337 P cell-cell adhesion
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0030155 P regulation of cell adhesion
GO:0030335 P positive regulation of cell migration
GO:0042802 F identical protein binding
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:2.94 TPM:2.88
ORF EntryO_TrvaFAMAMG14755_3prime_partial:A_TrvaFAMAMG_TR11817c0_g3_i1
Sequence
(Nucleotide)
ATTTATTTACAATTATTTCACATAGAAATTTAACTATAAACCACTTCAGATACTACTAAA
CGCTCCTAAATATATTTTATTCAGTACTTCTCTACATAAATCGTTTTTAGTATCGCGAGG
TTAGTTTCAAAAAAAACTTCATTTCTTAAGTGAAACTGGAGATGAATGCTGAAAAAAGGA
ATGGCCGAGGGCGCGGGCGAGGTCGTGGTCGAGGAAGAGGCCGTGGCAGGGGCAGAGGAA
GAGGTAAAAAAGTCCCCAAAGTGATGTCGAGTGATGAAGAAGAATGTTCCGTAGAAGAAA
CCTCTCAGGACGCCGAGGAACCCATCGCTGAGGAGCCCAAGGAGGAACCAGAGCCAGTGG
AACCACCTAAACTGGAAGTACCATCAGACATATCACAACTAGAAGCTCCAGTCTTCACGA
CACTTCAGAGAGGTCCACCAGAACCCATGCTCAGATTGGACTGGAGCCACCAAGCTACCC
TCATCGGGGAGAAAGTACTGAACCCTATGATATACTGCTGTGATACTTGTTCCAAACCTA
TATTAATTTATGGTAGGATGATACCATGCAAACATGTATTCTGTTTATCATGCGCCCGGG
CGGATCACACACATTGCCCTCGGTGCAGAGAAAAGGTTCTGAGAGTAGAACAAACCGGTT
TAGGCACAGTTTACATGTGCACACATTCCGGAACACGTTATGGTAACACTGGCTGTAGAA
GGACGTATTTATCACAGCGTGATTTACAAGCGCACATCAACCATAGACACGTGTCGTCTG
GCAACACTGAACAGAAGGCGGAACCGGAAACACCCTCCCCGTCCGTGCCTGTCGTCAAAC
CCATCACGCCAATGTCGGTGGGTAGCAACGACCCGCGCGGTC
(882 bp)

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