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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11810c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_pore_complex_protein_Nup155_[Bombyx_mori]
Ontology
GO:0000972 P transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006998 P nuclear envelope organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0031965 C nuclear membrane
GO:0036228 P protein localization to nuclear inner membrane
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
GO:0086014 P atrial cardiac muscle cell action potential
Transcript
Level		FPKM:4.37 TPM:4.28
ORF EntryO_TrvaFAMAMG14738_3prime_partial:A_TrvaFAMAMG_TR11810c0_g1_i1
Sequence
(Nucleotide)
TAACCTCTAAAATAAATTGACTTCGCGATAAATAAACCCCAAGTTTTATGTTTCTTCTAA
AAATATAATGAATTTGATTCACAAGTGACTGAAGATATTACTATTGCTTAAGTTTTAAAT
AAATACTTGCAAAATGCAACTTGAATCATTGGAAATGGCTGGCTGTACGCTTGACCGGTA
CATAAGCTTTGATAATTCGCGCCCTTCCTTTTTAGAGTTAACTGGGGTAACAGCGCAACG
CAGTCCAACATGCAGTGGATTGAATACTGGAGATTATCGGAACCTTGCAGCATTGTTGAA
CCATCCAAACTTGTCACAGTTAAAGATTCAAAACAAAGTTCCTCTACCGCCAGAGATAAT
GGAACACTTTGCTCATATGCAGTGTCATTGTTTGATGGGAGTGTTCCCAGAAATAAGCAG
GGTATGGCTAGCAATAGATAGCAATATCTATGTGTGGGCATTTGAGCATGGGACCGATGT
TGCATATTTCGATGGTCTCGGAGAAACAATAGTCAGTGTGGGCTTAGTCAAACCAAAACC
AGGAGTATTTCAGAATTTTGTTAAATATTTACTTGTATTAACAACCACTGTTGAAATTGT
TGTTTTAGGTGTTACATTTTCATCAAGCAATAGTGATTCTCAAAGAGAGTTTCAAGAAAT
ACATTTAGTCTCAGAACCGGTTTTTGTTCTCCCTACTGATGGTGTTTCAATGATGTGTGT
TAAGTCCTCTTCAAAAGGAAGAATATTTATGGGAGGCAAAGATGGGTGTCTGTATGAAAT
AACTTATCAGGCACAGTTAGGATGGTTTGGCAAGCACTGTAAGAAAGTAAATCATTCTAC
AAGCACTCTATCATTCCTAGTACCATCTTTCCTCAACGCTGCATTATATGATGAGGATTC
CATAGTCAAAATAGAAATTGATGATACTAGAAATCTTCTTTATACACTTAGTGAAAAAGG
ATGTATTGAATTATATGATTTGGGAAAGGATGGTGATAGTCTCAGTCGAGTTGTAAGGTT
GACTCAGGGGAAGATTGTATCAGCTGCTGTGGAAATAGTCAAAACCTTGGAAGCAAGCAA
TTTCAAGCCTGTTGTAGCCATTTCTGCAGTAGACCAATTGGAATCGGATCAATTGAATTT
AGTAGCAGTTACACAGACTGGTGCCAGATTATATTTTAGTACTGGAGGTGGCGATTTAAA
CCCTAATGACACCCAGAGGCCACAGTATTTGACTTTACTGCATGTACGACTACCACCCGG
ATTCACGCTGAACTCTGCTGTTTTAAAGCCAAAGCAAGTTCACAGTGCTATTTACGAAAA
TGGTACATTGGTGATGGTTTGTTCGTCTGGCGGCGGCGAGGCGGAGACGCTGTGGTGTTT
GTCTCGCGTCATCCCGGCCGGCAGCGCCGCCTACAGCGAGGCGCACACCGTGCTGGGACT
GGACGGCCAGGCGTGGGCGCTCACCGCCTTGCCGCACCAACACGCCGCTCACATCTCTAA
CGCGCTACTTACTAAGAAAGAAGTGTGGTCCGTATCAAGATGGGCAGTAGTAACGGGTGC
AGGAGCTTGCATCATAACAGCGGGAGCCGCCCCTGACTTGCTGAGAACATTGCTGAGAGA
TTGTCGTGGTCCTGAAGCCCATGCCGTAAAGGAATTCTTCCAGCTGCTAAATGTTGAACA
AGCATGTGCATGCGCGTTATATTTGGCGTGCGAAGACATTACAAGCGGCGATTTATCTAT
CAGTGAGTGGGCTACAAGAGCTTTCTTCTTATACGGAACTCAAATGACGCCTGCACCTCA
ATATCAACATCCCACACAGATGACATCAAGTATAGGTTCTCCAAAATTCTCTCCTAGACA
AATGTCAACGCCAATGTCGAGAGGCCCACAAGGTCAAATGCAAATACAACCAAATAAATT
TAATCAGTCCTACCAGCAACATATGAACCAATCGTTCCCTGGTTCACCAAACCATTCCAT
CATGTCTCAACAGCCGCAGTACGGAATGAGTCCGACCCCTTACCACCAGACATCGTTCAA
TGGAAATGTTACGCAGCAACAGAGGGATCCCAACTATCCCATGCATATAGAGTTTAGCGC
AAAACACAACGGCCTGTATATCTATGTCGGTCGAATACTACTACCTATCTGGAATTTAAA
ATGTGTATCAAAATCGCAAACACCAGACAGTAAAGAATTCATGTCTAGTCAAGTGACAGG
TGAAGATTGTGCCTACATAGCACAGAAATTACAGCGCGTAGCTGCATTTATGCAACGAAC
ATTAGCGCCGCAAAATTCTGATGAACACACATCTTTGCAGGCTTTAAAAAGATTCGTCTC
GATGGCTATAGAGATGTTAAATCTATGGAAGGTACTGTGTGAGCATCAATTCCATGTGAT
AGCTGCTAGTCTACCATCTGATCAACAGAATGCTCTGCAAGCAGCTAGTTTTAGAGAATT
GTTGGTTGGCGGTCAAGAAGTGGCGTGTTTACTTCTCGGATCGTTAGTGGCTGGATACTT
GCGGGATAATGCTTCAGTCGACGGAATCTCACAGAAATTACGACAACTATGTCCCACATT
GTATAGACAAGAAGATGCTACTTGTTCCAAGGCTAATGAATTGTTAATGTTTGCCAAACA
ACAAAAGAACCCTGCAGAAAGAGAGGAAATGCTGCAACATGCTTTGAAACTATGCAAAGA
TGTGGCTCCCAACGTTAATTTACCGTTAGTCTGTTCAAAACTGGTATCGGTCGGGTTTTA
TTCGGGAGTAGTGGAGTTGTGTACAACTTGCGCCTGCAAAATCGATCCTCAAGACAAAGC
ATTGCATTATTATAAGAGCGACCAACCGTCACAAGACCGGGAGGGACACATCGCTTATTA
CAGAAGAATGGAGATATATCGCGAAGTGTGTCTCGCGTTGGAGCGTCTGTACGAACGAAG
TAACGAGGCTTCGAGCACCGAGCCCGCGCCGCCTCGCTCGCCCGCGCAGCAGAGCGCAGA
CGCTGACGTCACACTCTCGCCTGCTGATGCCAACTATCAAGGCAGGAAATTAGTGTGGCT
CTGTTTGGCGCGAGATGATGAATTACTACATGTAGCCGTTTACGAATGGCTCGTTTCCAA
GAATCTCGGTGCAGAATTATTATCCCTTGGAAGAGCGCCACCTTCGTCCTTGAGGACATA
TCTACAAGCAGCAGCTAGGTCTGCTCCACCGGCTACTTCCTTACACCTTCTAGATCTTCT
ATGGAAAGTTCTAGAGAAATGCGGAGATCATTTAGCCGCTGCTCAAGTATTAGAAGGACT
TGCAACTAGACCTGGTTCTGGCGCGACGTTATCGCAGCGCATGTCGTGGCTGAGCGCGGG
CGTGGTGTGCGTGCGCGGCGCGGGCGCGGGCGGCGGCGAGGTGGTGCGGCGGCTGGAGGA
GGCGGGCG
(3428 bp)

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