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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11795c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_11261_[Danaus_plexippus]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031625 F ubiquitin protein ligase binding
GO:0032183 F SUMO binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.32 TPM:1.29
ORF EntryO_TrvaFAMAMG14677_internal:A_TrvaFAMAMG_TR11795c1_g1_i1
Sequence
(Nucleotide)
TGCAGATGTATGTTCGGCGCTACTTAAAGACGCGTTAGATGCAGTGCGTGCTTTACCCGA
CGCCGCATTGTACGCCGGAACCAGTACATTACAACAAGCACCCAGATCACAGAAGATTTG
GGCGGAGGTTGTCGATAGTGCAGCTAAGTTTTTACATCAGGTTGTGACTGGAGAAGTAGG
ATGCAATGTCCCTGTCGGTGATTGGCGTATTTCTCTATGCGTATGGGTAGAGTTGTGTGC
AAGAAGAGCTGAGTTACCCGCGCTATTGAAAGCTGCTGATGTCCTCGTTACTTTATCTCC
TAAACAAAAACGACAACCTGTTAATAACAAAATTACCTTAGAAGAATGTACAGCACCACT
GGGACCTTTTCTCAAGCGTATGGCAAAAGTAACAGCAGCAAATCCTATTGTCAATAATGA
GCCTACAACTGAAACAAACCCCACTGAAGAATTTTTAAAAGATTTGACCATACCAAGTGG
AGATGGGTTGATGAGTGTAAGAAAAGCTGGCATTGCTCTTCTATGTCATTTAGACAGACT
TGGAGCACCATTGTTACCACCTTTAAAGGGATTTGTCACATGCACTGAATCTGCACAAGA
AGTTATTTCGGTAGGATTTGGATCAATACAACTTGGTACACTAAGATTGCAGCAGATAGC
CTGTGCTGAGAAAGTAGCTTTACTTTTGACTCAAGATGGCATTGTATACACCTTGCCTTA
TGACACTATGACACCACAGTTGGTTCCAGGTTTAGAGAACAAGACAATAATCCAAGTGTC
GTGCCACTCTATCGGTCGTCACTTCCTGTGTTGTTCGTCGTGCGGCGGCGTGTGGTCGTG
GGGCGTGGGCGAGGACGGGCGGCTCGGGCACGGCGACACGGCGAGCCGAGACGCGCCCTC
GGCCATACATCACCTCGCGCACCATGAGGTCACGAGGGTCGCTGCGGGTGTCGCTTGCAG
TGCTGTAATAACATCTCGTGGTGCTTTATACACTTGGGGTCGCGGTCCTCATGGTCGACT
TGGACATGGAACTATAGAAAACTGTCTTACGCCACAGCCTGTCTCATTCAACGCACATAA
CATTGAACGAATCATCGATGTTTCATTAGGATGGGGCGACAGCTTAACGTTGTGTTGTAC
TTGGGAGGGGGCAGTACAAGGATTTGGTGATAATGACGGTGGAGCACCCAGAACTATATC
ATCGCTCTCAGTACTGAGAATATCGAGGGTCTATACTGGAGAGCATTTCCATGCTGTTTT
GACTGACAATGGTCAAGTATACACATGGGGAATGGGCGATGGATATCGACTTGGACATGG
CAACTTAGAAAACGTTAAACTTCCAAAATTAGTAGAAGCATTTCAAAGCATACGCATAAT
TGACCTGTCTTTGGGGTTATCTCATGGTGTGGCCTTGACATCGGAAGGTGCTGTGTACGC
ATGGGGCACGCACGAACGTGCACAAATAGTGCGACCTGTACCACAACTACTACAAGTGCT
TAGTCCATCATTTAAAGCTAATGGTATAAGTGGTGGTCCAAATCATATTTTCGTGTGGAG
TGAAGAAAATCCTCGAGATTTACCGTCGTCTATGCCTTTTGTCATAGATTTATCAGACAG
TACTTTTAAATTATTAGAAAGGCTGCTAAGACTAGTCGTGGAACAAAGTACCTCTGGTGA
CAGTAAAGAGAATGAATGCTTAGCAATTGCATGTTTGAATTTGCTGAGGTTACAAGTGCA
CGCATGGCAATACTCCCGAGGCATAGATTCGGATGAAGCTGACACAGAGAGTCGTTCGTG
GTGTAGCGGCGTGCACACTGCGCTCGTGTCGCTGGTGGAGGGGCAG
(1846 bp)

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