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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11795c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.48 TPM:0.47
ORF EntryO_TrvaFAMAMG14676_3prime_partial:A_TrvaFAMAMG_TR11795c0_g1_i1
Sequence
(Nucleotide)
GTCTTCTGCAATCGCCAATCAGCAGTTTTACGATTCCACTTTGATTGATTAAATGGATTT
TTGTTCGGCTCGTACTTTGTTAAAGCGATTTGCAATGTGATCTTGCATTTTTAATTCAAA
TAATACATTACAATAGCTTAAAAATGATCGCATGAATGTTTCCTAGTGGTGCCGACAACC
GGTGACGAAAATGTCAAGCCATGAAGAACACGAACAGTTCATATTTCGTCCACAACAACA
TTTGGATGCTAAATGGCTGAATCCTGACTTACAGGATGCTTTACACAACCCAGAATCTCT
TTCAGCATTATTCAATGTTCTTTTACAAGACAGGGAAATCTATTTCAACAGTGGTAATGG
TCTTGTCAATGGTGCTGGCATTACAGCTAAACTTGGGGATAGTGGAAAATATTATTGCGG
CCTAAGGATTCTAACTTGTACATGTTGCGATGGTCTCTGTGGCCCTCATTCTGGATGTGC
ATGTGCTCCATGTACTGCTTTGTCTGTTGAAGAGGAGCACAGAATATCTCTGCTTACAAA
ACATGTCACTCCACCTACATCTCTTCAAGTTATTGATGATCTGAAATGGAAACAAGATCC
AGGACCAGAATGTTTGAAAAGTTTAATGGAATCATTGGTTTTTGAACAAAGATTTAGAGC
AATCAATACTGCTGTCACCTGCCCTTTAGTTTCAGAAATTCGCCGACTCATAGTTTTGTG
CAATAGACATCTTGTAGCAGTTATAAGAGATCAAAGTCACAACAAAGAAAGCAAAAAAAT
TAAGTTGGAAAATAAACCTCCTCATGGAGTTAGCAATAGAGCTCTAAGTAGTGTTACTGC
ACTCAACAACCCTGTAGATACTAGTACAGAAAGTCAAGAAGAAAGTGAGGAGCCCACTGA
GGATGCTGAAAGTACACTCGGATTGGCGCGCGTTGGCGCTCGTGCTGCCTTACGCCTAGC
TCTATCACTGGTGCGTCGTGCGTGGCGATGCGGGGAAGATGCAGATGTATGCTCGGCGCT
ACTTAAAGACGCGTTA
(1036 bp)

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