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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11793c0_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_lysine-specific_demethylase_3B_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007596 P blood coagulation
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0046872 F metal ion binding
GO:0046966 F thyroid hormone receptor binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:5.50 TPM:5.39
ORF EntryO_TrvaFAMAMG14666_3prime_partial:A_TrvaFAMAMG_TR11793c0_g1_i4
Sequence
(Nucleotide)
GTTGTGTGTTGAACGTTAAGTTTTCAACGTTGTGTAGTTTTTAAAAGTGAATAATGTGAT
TGTGTACTTCGTTATGGCCTATAAATATCGTGAAGATCTAGTTGGCAAACGATTTCTCGC
AGTGAGTGGTTTAACAAAAATAAATGTGAATAAAGTTTCTGAATGGGGTTGGAAAGCTGG
TGTTATCAGAGCAGCATCACTAAGAGATAACAAGAATAAGGAGCTCCAGGTGTTAGTGGA
ATATGATGGTGTAGAGTGGCAACGGCGCGAGTGGGTGGCAGTGTATTCGCGACGAACTTT
TCGAGTGTTTTTAGTTGAAAGGACGTTAGTTTGGGCTCCTAGAACCGTTGATGGCACAGA
AGTTCAATGGCCTGCTTTGACATTCACGCAACTTGCAGCTGATCTGACGCTGGAAGCAGA
TGCTCAGCCCGTGGAGTATTTACATGACAAAGAGCTCCAATTTATGGACTACACCAACCT
GCTACCCTATCAGAAATGGGATGCTCGCCTCGCCGGTTTGGAAGCTGGTATCGATGCTGA
TACTTTATCAGCTCTGTCAGCTGAAGCTGCGGAATGGCGAACTGCCCAAGACGGTCAGAG
GATTCTGACAACAACACCATCGGTGCTGGGAGGTTGTAGAGCTCAAGTGTACCGGGCTGC
TGGAGCTACGCAATGGTATACTGCTGTAATCGTTGGAGTCAATGAACATACAGGAGAATT
GACGGTGACCGATGATACCGTTTTAGAAGAGCACAGTGAAGATCCTTCGCTAGTCCAAAT
GAGGCTTCTTGGAGATGGTGTGATAGAATCGATAATGCGAGGAGAGGTCGTGGGCGTCAT
GCCGAGGAGATCCCGCTCCAACCTTCAAAGAGTTGATCGGGAGACAACTAAAAGTCCGGC
GACGACTGGAAGCAGGAAGAAAGCGGGAGCAGTAAGGAGCAACGGGCAGATTGCACAAGT
AGATCCCACTCCGCCTCCACCCTCAGAATCACCACCAGAACGAGAATCAATTGAAATCAG
CAAAAAAGGTTCAGAAAATAGTGTGAGTGAAAGTGATGTCGTCAGTGTTAGTGAGGAAAC
CAAGTGTGTAAAACAAGAGGAAGTGAGCAAATCGGAGGTGTGCACCAAAAGTGATAGTGA
AGTGAAGAGTGCAGTGAGTTGTGTGGGCGCGGATGGTGTTGCCAGCGCCGTGGCCTCCGA
GGAGGACGACTGTGTGATAGTGTGCGCTCGAGATGCGGACGATCGGTCCGACTCAGGAGT
GAGTGGTGTCCGGTCAGGCGGCTCCGCCAGCTCCGTGGAGGAGCGGGAGTGGCGCGGCAT
GGCGCACGGCTACGGCGGAGGACCGCCGCCGCCCCTGCTGCACCTCCCCCCACCGCCGCC
GCCCTCGCTCTACGCGCCAGAGCTGCTCTGGAAGCAGCGATACCAGACGCCGTTGCATCC
GCAAATACACCATGCCATCGCCGACGACTACATGGCCTACGACAGAGAGAGACATGAAAG
ACTGCTACGAGAACGAAGGGAACAAGAGCAACAGATGCTGGAGAAACAACAGAAGGACAG
AAAAGAGAGAGAAAGGCTAGAGCAGGAAAGAGAACGAGAGAGGGAACGTGAAAGAGAACG
CGAGAGAGAAAAACAAGAACGAGAAGAGAAAGAAAGAAGGGAACAAGAAATTCCCGCTTC
TAAACTAGTTTCAAGGCATTTTGAAGAATCTCTGAGATTGTTTGAAAAGAGAGGAGAACG
CAGTAACTTGACGTGGTCGATATTGCATAGTCTGACACCTAATCGCGCTGCCCCAGTGCC
CAACCATGATAGGTTACGGGTGCCTACGTCAGAACGAAATTACTATTCACCTCCGGGACA
TCCGCCGACGCATCCCACCCATCCTTCCCATGCATCCAGTCGACCGACTGTTTTATCACC
TTCAGACTATTGCTCCCCTCACGCTCGCCTCGTACCTCCTAAAACTCAAGATAAGAGTTC
ATCGCACCCCGGTTTACCGAAAGGAGAACCTAATTTTGCTCCATACAACTATTCTCCATA
TAGAGCCTATGAAAAAATGAAGGATCCACATTTACCAGCTCCACCACCTTTGGTTTCGGA
GAAGAATACAGTTATAGTAAAACATGATGCAAAACAAATACATCTTGAGCAGAAACATCA
ATACCCAAGTAAACCTAAGAATGATCCTTCACCGCATTACCTTCCGTCTCGGACGTATCG
AACGGGACCGTCACCTCACGCGCCTCCGCACCCGACGCTCCAACCAGCGCCGCACGCCGC
AGCGTTACCCGCACAGGACAAGAGCGGTCGACGGCTGTATCAGCCGCAACCGCAGCCCCA
ACCCCAGCGGTCGCCTGCCTACTACGCGGCTGCACCCCCAGTGAAACCGAAAGTTTCAAG
TCCAGCACCTCCTCATATTTATGGAAAACCTAGCAATTCTCAAATTCCAACGCATTATGC
TGTCGCCGTTGAACCACCCCCTCCGCCCATCGCGAAAGCGGATCCCCCACCTGTGCCGTA
TCCGCCTCCTTCAACGTATTCGCCGCTACCGAGGACGCGACCTCCACCACCGGCACATTC
CCGAACGCCAGAACCTCGCGCGTCACCACGACATATTGTTGACTCCTCCTCATCGACGTC
GCCGTGTCAGACGCAACCATTAGATTTAGGTGTACCTCGAGATGACCCCGATCGATTATC
GCCTCGGAGACGAGCAGCACTGGGATCACCATCGCCGTCGGAATCTGATGCAAAGCGACG
TCGTCTCGAGGAAACAGCAGCGCCCCAACCCCTTATAGCAGCAGCAGCGAGCGTAGCACG
GGCCTCGGCTGGATCTGAACCGGCGCCGCCTGCTCCCGGTCCACCTTGCGATGTGAGAGT
GCCATCCGCTGACGGAAGTATCGAAACACCTGAACGTGCAGCCGGGGCGTCTCCGGCTCC
GCGACACACGCCCGCCGCCAGCCCCGCGCCTTCAACGCCGGTGCCTCCTCAAGTAGCTTC
TCCGCTGCAAGCCGCGGCACCGCCACCCGCACCCACTCCACCTGCGCCTCCCGCCACTCC
GCCAGTCTCTGTGAGCGGAGACGCCGACACACCAGCTAAGGCTGCATCGTCACCTCGGGA
TGGATCGGCCCCAGTTCGACATCTTGGTAAAAAAGCGTGGCTACAAAGACATGAAACGGC
ACCAATAGGAGAGGGAGACTGTTCCGGGGGTGGAGGAACATGCATTACTCTCCCGATGAC
GATAACACGGAATTCAGAACCAGACGATTCGGGTTCAAACGTTACTGTCCCGGTCGCTGC
AAAATCCATCCAACGGTCCGTCCGGAAAACATCGAAACCAAGGAAGACTAAGGAGCCCAA
CGGTCGAGTTGACGACGCCGAAGAGGACAGTTCTAGTTCTGATCGTGAATCCACTGCACC
ACCAAAACGGAAACCTCCAAAGGCGAAACGGAAAAAGGGCAGCGTCGCCCGAAAAATAGG
AGACGAGCCAAAACGGAAGAAAGCCGCCGCAGAAAGTGGTAGTGAAAGTGATAAAGAAAG
TGATGACAAAGACTCTGATTCCGGTGGAAGCGGGAGCGGCAGCGGCAGCACGTCGAGCAG
ACGCGGCGCCGGCGGGCGGGCGCGCGGCAGGCGGTCGCGGGGCGGCG
(3647 bp)

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