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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11779c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_polycomb_protein_suz12-B_isoform_X2_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001739 C sex chromatin
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016574 P histone ubiquitination
GO:0031490 F chromatin DNA binding
GO:0032993 C protein-DNA complex
GO:0035064 F methylated histone binding
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0043565 F sequence-specific DNA binding
GO:0045596 P negative regulation of cell differentiation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.46 TPM:3.39
ORF EntryO_TrvaFAMAMG14619_5prime_partial:A_TrvaFAMAMG_TR11779c0_g1_i3
Sequence
(Nucleotide)
CCTCAGCACTTCTGTTGCAGCTGTGGTAAACGAGCCGATGAACTTGGCGGTTTCACCAAT
AATTTAGATAAAAAAGCTCAGAAAATGCCTCCCAAGAAGCGAGATAAAGACGGTGAAACA
AATAAAAACTCCAAAATAGATCATTTACAGGCTGACCATGAGCTATTCTTGCAGGCGTTT
GAGAAGCCAACACAAATATATAGGTTTCTAAGAACGAGAAACATGTTATCGCCGATATTT
CTGAACAGAACCTTGTCGTATATGAAGAGGAGAATGTCGAGAAGCAATAAGAGCAGAACA
GGGTTCAAAGTAGACTCATTATTGGAAAAGATAACATTGAAAAAGAGTACAGAACTCCAA
CCCAATAGTTTAGGAGGTTATATGACTTTAACATTTCTTGGGTTTTACGATAAGAGTCTC
GTTGACCCTCGAGACTTCCAAGTGAAAGTAGAAACCCTTCTCTTGAAGATATGCCACAAG
AAACGCAAAGAAAGTTCCTCTGCCATAGTTGAAGTTTCAGTTGGCAGTTGCTCAGTTCCG
TTAAATCCTTCTACGTCTGAGCCTCCAGCAATGGCTTCCGCAGTGAGCATATCCAGTGAC
ACATTCAGTCCATCGCAAGGACCTAATGTTAAATCTTATATGTTGATGTTGAGGGTGACC
GTCACAAAAACAAATGTCCCCAACACTTCAAATGGTGCTAGTACTACTGAAATTACGAAT
GGAGATTGCGATGCTGAACCTGTAACAAAACGCCTCAAATCTACAATGGAGACCACTGAT
AGTAAATGGAGCAAGCTGTATGGTAGTGAATTGATAGTATATGACAAATATAATAGATGT
CTGTTGACTAATGGAGAGTATGACCTTGTATTACACGACACACCACCAACGAGAACCAAC
ACCATTGCTCGGTCACCGCATAAAGCACTTATGGCGCAATGGGAGACTATACCTAATGAA
AATGACATTCATACTGAATCAAATCCATTTGACATATTCAAAGTTAGACCACTACTTAAA
TTAAAATTAAGCTGGAGCCAGGAACCAACGAACGGATTAGTGAATAGGCCGAAATTATAC
CAACAAAGTGAAAATGGTGTCAAGAAAGATTCAAGTTCTAGCAAAGAAAAATCATCACAT
AAAATTAATTCTAGTGATGTCAAAAACGGTGAAAAGCTCAAATCAGAGTCGAATGAAGTA
GATTCGAAACGCCAACAGATAATTTATCAATTTTTGTATAACAATAATTCGCGGCAGCAA
ACTGAAGCATGCGACGATCTACACTGTCCATGGTGCTCACTAGATTGTGGGACTTTGTAT
TCGTTGTTAAAGCATCTTAAATTGTGTCATTCTAGATTTAATTTTACATATTTCCCAATT
CCCGGCGGCGCCCGCATAGACGTGTCAATCAACGAGCTGTACGACGGCTCGTACACGGGC
TCCCCGCACGACCTGATATCGGGCATGGGCGGGGGTCGCGCGGGGCCCGCCCGGCGCACG
GCGGTCACGCGCGTGCTCGTGTGCCGGCCCCGCCGACCGCCGCAACACGACCTCGCCGAG
TTCCTGGAGCTCGACGACGCGGACATGCTCGATGCGCAGAGACCATACGTCACAGGACAC
AGCAGACTGTACCATCACACAATCACATGCCTCCCAGTCTACCCTAATGAACTAGACATT
GACTCTGAAAGTGAAACCGATCCATTGTGGTTACAACAAAAAACTATGATGATGATAGAC
GAATTCACTGACGTCAACGAAGGCGAGAAAGAACTAATGAAAATGTGGAACCTACACGTC
ATGAAGCACAACTACGTGGGCGACTGTCAAATACCACTCGCCTGTCAAATGTTCCTACAG
AAACGGGGCAAAGAACTCTTAGAAAAGAATCTGTACAGAAACTTCATCCTGCACATGTGT
TCTTTGCACGATTTCGGTTTAATAAGTGCGGTCAGTGTCTACCAGACTGTGCAAATGCTC
AACCAAATGTTAGCGGACAACACTGAGGCCAAAGAGAAGATGAGGGAATCGTTGAAAGCG
CAGCGCGAGCACTGGGAGGCCGTCGGGAAGTACCAACAGCCTCTCGTCATAGAACAGAAA
CCGCAGATCAGTACTGTCAAGCTGAACAACGTCGAGGCCTCGCCCACCGTTCGCCGAAAG
ACTTCAAACTTACAGAACGCTAACAGAATGGCGAGTGCCAGCGCCAACTTCAACAAGTCG
TCGAGCCCCGGCCCCAGTCACACGGAGACGAAGAGGAAAATGTCTTCCGGCAGCATTCAG
AGCCGGAAGCGGTCGTCCATATCGGAGCGGAAGAGTTCCGTATAGCGATTGCTGCGCCGG
TAGGTCCGCCAGGACTGAACCGAATGAGGCTGAGTGTAGCTCTAAACGGCTTAACGGGAA
ACGAATCAGGGGTGTACAACATGTCTTGCCTTTGTTGATTTCTTCATTATATACAGGATG
TATCTTAAATAAATTCTCTCTAATAAGAAACAAATCACTTTTTTGTTTCCGTTTTATTTT
TTGTAGTTCAAAATGTTACAGCAAATGCCTTGAACTTTAGAATTTAAAAATCACACCTTT
TTGTAGCTTTTATGAATGAATTAACGAAGGTAAAGGCATGCTGTATCCTCTTAAGCGTTT
TATACTAACGCCATATCAATAATTGTTTTTAAAAATTTTCTCACATATTCTTTACTGCCG
TATGTTAAGATTTTTCAAAGGATGTCCATGTAATGGATGACAATAGTTTAGTTAAATTAT
TATTATGTTTCTGTTTCGATCTATTAGGTCAAGTATAAATGGCTTTTGTTCGTAGATATG
TTTGAATCGATGCGTTGTCTATTGCGTTTCTACTTACTGTGATTTTTTCAATACTAATTA
GCAATTTTAGTTAGTTACTACGTTCTTGTTTCAGCTTTCACAATAATTTATTTGCACCCA
CCTTATTGTCATATTATTATGAATACAGGGTGATTTTAAAAGATTTTACGTAAAGGACTT
TTTATAACTGATTGTCAATTTGTCACAACTTAATGGTAAAAACATTACAGTGTAGTTTAT
TAAATTGAAAGTAAAGAAATAATCTTGGTAGATTATGGTCACCAACTAATTCCAAATATG
TGAGGTTACGCGATGTTTTAGCAATATTTCAAATGTAAAAAATTCGAGAATAATTACTAA
CATTTTCAGTACCTATTTTCTACTATTCTATTTTAGTTTTCGAATCGAGTACATAATTCC
TTGTATTTTCTACAATATGTCCAATCTTTTATCAATCACCCTGTATATCGCGTTCATATT
ATTATTATTATTAACTATAGACTTGTTGCCTTTACTGAGGAAAATAATTCCTCGGAAAAT
ATCGATTGACTTAGAAAATTTAGGTCGGTAACCAGCTGTTTATGAAATAGTTGTATGGAT
TCATGCAGCTGATTAGCAATAAAAAAGTGCACTTCGAATTGTATTTAAGGAAAATTTGCA
TCTTATTGGTATATTTTAGGCCCAGCAATGGTGTATTTAGACATCATGCGGCCCACGTAA
GGTCTATGCTACCATGCGACCTGTCATGCATTTCGCCATGACGCAGCTAACGGGTTACCG
ACAATTGACTTAGATAATTAATTGATTATACAATTGGATGTTTTTGTAGTTAAATTTTAA
TGAATTGAAGCAATGTAGTATGAAATCGAGTCATAGTATAAAAATTAGGTAATCGTGTAA
TCGTGATTTCTCGTTTTTGTAAAGACTGCAGGGTGGTTATTGCCTTAACTCGATTTACTA
TTCTCAAGTGGTTCTCATACAAAATGCAAATAGTAAGTTAGATTTATTAATAAAATTATG
GTATTAAAATTTAATGTTATTAGGCTTTTTGCTGATCAACAAATATGTATTAGGTATGTT
TTTTTTAAGTTTACTTTTAAATAGTATTTCATTTGATGCATTTGTGATTTTTAGTGAAGC
TTGGTTTGTTATTTTTG
(3977 bp)

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