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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11747c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_tRNA_pseudouridine_synthase_A,_mitochondrial_[Amyelois_transitella]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0004730 F pseudouridylate synthase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0044822 F RNA binding
GO:0070902 P mitochondrial tRNA pseudouridine synthesis
Transcript
Level		FPKM:2.24 TPM:2.19
ORF EntryO_TrvaFAMAMG14515_complete:A_TrvaFAMAMG_TR11747c0_g1_i2
Sequence
(Nucleotide)
TTTTTTTTTTAATTATAATAGTATTAATCTTGTCATATTCCCATCGAATATTTTATACAA
CAATTCAATATATCTATTAAAACAAATCTGAAATAATTTCTTAAACAACTATGACGTATT
TTTCACACTATCCAATGAAACATCACTTTTTTCACCAATTTTATCACTAGGTTTTTCAAC
AGTTTCATCACTATGTTTTCCGACAGTTTCATCACTTTGCTTTTCAACAGTATCATCACT
CAGTTTTTCAGGTACAGCTTCATCACTACATTTTTCAGGAACTTTATCATCAGTGTCATC
ATCGTCATCATCATCATTTTCTGCAGTTTTTTCAGCTTGAAGTTGTTCTTCAGTCGGTTC
ATAGGAATGCCTAACAAGTTTCTCTAACCACAGACCCATGGAATCCCTTTCTATTTCCCC
TTTCACAATGTTAGGATAAATGTGTTCGTCTTTGAACTTTTGTATGCTTTCTTCTTCCTT
GTCCCAAGTAAGACTGTCGTGGGTTGTTTTATGACGCGCGTCGTATCTATCGTAATGGAC
TTTGTCCAAAACCAGGCCTAATCCAGGGGCTGTCGGTATCATGACCTTGTCTTTACCGAA
AGCCTTCTCCATGATCGAGGAGTCAACGTAACCCCTCATCACTGCTATCGCTAACCCAAC
CATTTTCCTTATCTGATGCAGCATGAAACTTTGACCCTTAACAATTAAAACTGCAAATTC
CATATCAGAGTGAACAAAAACTCTTTCCACAGTAAAACTCATCATGTACCTTGAAGATGA
TGGGTCTTGATGGTGTTTTTTCTCCGTAAAATTATGATAACTCCTAGTACCTTTGTAAAC
TTCAAGTATACTATTCAACTTTTCTATTTTATCAGCCGGAATCCTATATTTCCTTCTCTC
TTCCACGGTCACTAAACTAGGTTCCAGCGTGTATGTGGGAAGAGTATAGCTATATGATCG
AGCGTTGCATTTCGATTTACAATTGAATCTGTTTGTCACTCTTTTTACTCCAAATACTTT
GATAGTTTCTGGAAGTCTTTTGTTTATTTCTTCTACATTTACTTCGAGAGGTAATTTAAG
TGAGACAACTTGCTGGGCCGCTGACACACCCTTATCGGTTCTCGAGCTCCGTTGAAACTG
TGCATTTTGCGCATTATCAAAATCCTCTTGCGTTATGTATTTGGCATCTAATAATGCTTT
TAGTAATTCTTCTTCTATTGTTCTTACTCCAGGATTACGCTGCATACCATAATAGTCAAC
TCCAGAGTATCCCAACAGCATGGCCATTTTTTTTCTTTTAATTCTTTCGTATGGTTTCTT
AGCGTCATTTTCACCTTCCGCTTTCTCTTCCCATTGTCTGTTCATACGACGTTTGTTATA
TCTTGTTAGGACTTTATCAGGAACTATTGGTAATTTTTCATCTTCTTTGATCTCTGTAGC
GACCTCCATGGTGGAAAATCCGCGTACGTTTGACGATACTGATCTTACGGGACGTCTCGG
TAAACTGTTTTTCAAATTGCTAACAAATAATCTGAGTAATGATACTGACATACCTATAAA
GCTTTTATCTACACAGTTCAGAGTAAATCACAATATTTGTTTCACTACCGTGACCGCTGC
AAGAAACGTAGTTTACAAAGTTCATGAGACTAGATTTAAATAAAGTTCAAAATACGAGTA
GGTATATCACTGAAATAGTTTATTAAAATTTTATATGTTTTAATAAACATTTATTCTAAC
ACATTGTTAAACAAATCTTGAAATTATTGAGAAACTTCAACCGCTTCAACAGTGAAGTAA
AAATGAATATGGCGGACAAAAGCTTTTTTTACACATTGTGTCACTGATGTTTTGGCAGCA
GAGCTATTAGCCAAAACGTAAGTTCTCAACCAAATAGAACCTTTTCGTTTGACTGTGTAA
TACCTTTACAAACAAAATATACATCAGAAATGGTTCGTCTCGTAGTATTTTGAACGAAAA
TTATTCCAGTCAAGTCTATGCTATGTCATCAAAATGCGGTATTTGTATAATACATGTATA
CATGGAAACTGACAAAAAACAGAGTACGCATGCCCGAACTAACCAAACTAACGCAGGCGT
ACTAACGACTGGATTATCCAGGACAAGGTCTATGCAAAATGGGTTGACGCATTGCTCTAA
AACAAAAAAATGAGGGGTGGAAGCTCGGAGCGCCTTGTCGCCCGTTCGCGACGAAGAGGA
GAAGCGCGAGCAAAACTCACACGTTACATCACCATAGTCCTGGCTGCTGTCCTCTGCGGT
GGCGGATCTGCCTTGCTCTTCCTTGTGCCCCTGTACGCGGACCCAGCTCTGAGCGCGCTC
GCCGCAGACTTCGACCCGATACCGGCGGAATGCGTCACAGAGAGACGCGACGACCGTCTA
GGCTTGGACAACTGCACCTGGGCCTCCTGCAGGGAAGGCTGCACCAGTGACGCTTACAAG
TGTATACAGCTGCACGTGAAATACAAAGCATACAACTTCGAATGGCGGCCAGCGGTTCTG
TTTGTCAATATAAAGGGGTGTGGATATCCGCCTGTAGTGGACTGTACTAACTTTACAACA
AATTACGGGTATGTTGGGGCGAGGTACTCTTGCTTTTGGTCGAGAGCGGACACGACTGTT
GTGGTTCCTAGATGGTCTCGTGGGGAGCAGGTGGCTACTGTAACGAGGACCCTGGCGCTT
CCGTTGTTCCTCTCAGGATGTGCCGGTATTGGGCTGTGCGCACTGCATTGTGAATGCAGA
CCTCGTCACCGTCGCAGGCACTCCAGGAGGCCTCCACGTATACCTACCCTATCGCCTGAT
GATGCGTCAGTGTACCGGTTAGCGTAGCAAGAAGACCAAAGTATATTTCTATTTTATTAC
AATAAATGTGACTATTTCTTTAAGCAAATAATATCATGTGTAAATAATAAAATGTAAGTA
ATGAAAAAAAAAAA
(2954 bp)

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