SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11741c1_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_Dr1_[Papilio_machaon]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0016573 P histone acetylation
GO:0042766 P nucleosome mobilization
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:1.55 TPM:1.52
ORF EntryO_TrvaFAMAMG14492_complete:A_TrvaFAMAMG_TR11741c1_g3_i1
Sequence
(Nucleotide)
GCGCTATGATTGGTGTATGAAGTATTCCGAAGTAATTGTTTGTTTCTGAATACTTCGTAT
TTTATATTTAATTTATTTATAATGAAATCCTTGGATTATCTTTTGGGTTAAGTATCGATT
AAACCAGCAGTGTTTAGTATAGTTGTTTTACTTACCAGGTCCTACCATAATATAACAAAA
CTGCATCAGTTACAGTAAATGTAACAATTTGTGAGGAATATTTATACATTTTACAAAGAA
TTTTTCATCATGGGAAGTCCTGAACGAGAACTATGTCCACCACCTTCAGAGGAAGACGAA
CTGACTTTACCTAGAGCAAGTATAAACAAAATGATAAAAGAGTTAGTACCTTCTGTTCGC
GTAGCTTTTGAATCAAGGGAGCTAATATTGAATTGTTGTACTGAATTTATACATTTGATA
AGCTCAGAAGCAAATGAAGTGTGTAATCAAAGTAACAAAAAGACGATTAATGCAGAACAC
GTACTTACAGCTCTGGACCGATTAGGTTTTAGTGATTACACTATAGAAGCAGAAGCTGTG
TTAAAAGATTGTAAAGCAGTAGCAGCAAAGAGAAGACGACAAAGTACACGACTTGAGAAT
TTGGGTATTCCTGAAGAGGAGTTGTGGAGACAACAACAAGAACTTTTTGCTAAGGCCCGT
GAAGAACAAGCAAAACAAGAACAACAACAGTGGCTTTTACTGCAACAACAAGGACTTGTT
GGTACCGAGGGAAACCCCCAACCTTATGTCCCACCAGCTACCACATCAAGGACTGATGAT
GATGAAGATGATGACTACTCATAAGTAAATTGTTTCATGTTAAATTTTATTTAACAAATG
AGTTATTTTGTAACATAGTCTTCATTTTATTATTTTTAAACTGATCAAATAATGAAGTCA
AGTGTATAAAACAATAGTCTTATTATAGGTTTCCTTGTTACTTTGGATACAGATCCTTGT
AGTAAAATTTTAAAGGAGAATAAGCATACATGTCTTATTTTTATGTGTTGAACTTAATCA
CAATTTCATTGTGAGAATTAAACTTTTTGTAAGCAAAATTATAAAATGTTGCATTTTTAT
TTGTAAATCCAAAATCTAAAAATCTGAGTATACTTACTGCATAGCAATAATTATGTAGAG
TAGCACAATCATTTAATTTTGCAGTTGACTATTATATCAAAAAAAATCAAATCAAAAAAC
ATTTATTCTGTGCACATAAAAAAATCTTATAACTATTAATAGCTTAAACTAAAACAAAAT
TTCGATGTAATTTTTGGAAAATTCAAGTTGTTGTAGCCTTATTTCTAAATACAATAGAAA
TTTAACTTTACATGGTAGAATAATTGCAAATTAATTAGCTAAATAAATGCGGTAGTTGAC
AAAAAAATACCACTTAACTTGTTATTTCGTATACCTTCCTTCCACATGTAAAATACCTTC
TTAATTAAACAATGCAGAGTCCTTTAGTGTCGCCTGACATTGCTGAGGTTCATGAGCGAT
AACTTACGATCAGGTGGCCCGTTGGCTCGCTACATGGTAATAAAAAATGT
(1550 bp)

- SilkBase 1999-2023 -