SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11736c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_retinol_dehydrogenase_11-like_[Amyelois_transitella]
Ontology
GO:0001917 C photoreceptor inner segment
GO:0004745 F NAD-retinol dehydrogenase activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016062 P adaptation of rhodopsin mediated signaling
GO:0016491 F oxidoreductase activity
GO:0042572 P retinol metabolic process
GO:0042574 P retinal metabolic process
GO:0042622 C photoreceptor outer segment membrane
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
Transcript
Level		FPKM:9.02 TPM:8.84
ORF EntryO_TrvaFAMAMG14463_complete:A_TrvaFAMAMG_TR11736c0_g1_i1
Sequence
(Nucleotide)
GAGCTTCGTCCTATTCGGGTGTCCCATGACACCTCTCAAGTTTTTTTTTTGTTATTTACT
TTGTGCCATTTTTAAACTCTAACTGTATCTGTAAAAACCTATTTCTTCCCACTGCTGGGC
TCAGGTATTCTCAGTAGAACGGACAAACATAGTCTATCACGGTTGCCCAATGCGCATTGG
TGACTTTTTAACTGTATCTATTTATATTTGATAGAAACAAGTAGGAGTAGTAAAATTATT
AAAAAAAAATGGAATTTCAAACCGGGTTATATAAATAATAAGAAGGGTGGTGGCAAAGGT
GGTAACACAGACCATTGTGAATCTAAGTTGGTTTTTAAAAGAAATCCAGTTTTTTGTGAA
GCATACGAACCAATGGTCAGTTATAGTTGATGTAATCAGTCGTGAGTTCGTGAGCAATGA
TAACCACTTACCGTCAGATGGTACGCAGGCTCGTTCGTCTGTCTTGCAATAAAAAGAGCA
AAAATAGTAGATAATGACATCGAAATAACTTCTCAAATTAAATAATGATTCGTAATCAAA
CAACCAGTGTCAATTTATGCTAATAAATTAATGATAGATGTAATTACTATTATTAATATA
ATAAATGTTATAAAATCATGTGAACGGTACGAACAGTGTTCTTTTTTTTAACTATAAAAC
GAGTCGTTTGTTTTTGTTAAAGCAGTATAACTATATCAGGCTCGCGGACTGTACAACGAA
CTTCAACATGTTCGTCATTTTATTGTTTATTATTATTTCAATATTTTTAATTCGATTATA
TCTACGTTTGTCGATAAAAATGAGTGATCCGAATATTTCAATGAAAGGGAAAGTGGTGAT
AGTGACGGGAGCTAATTCAGGACTCGGCTACGAAACTGCTAAAGATATAGCGAGGAGAGG
TGCCAGAGTTATACTCGCATGCAGAAACATCAACAGAGGAACAGAAGCTAGAGACAGAAT
CATTAAAGAAACAGGAAATAAAAACGTTGTGTTCAAACAAGTGGATTTAGCATCATTCAA
ATCAGTAAGGCAATTCGCAAAACATATACTTGAAACAGAGACTGAACTTCATGTTTTGAT
AAATAATGCTGGATTGTTTTGCAACGAGAAGTCGTACACAGAAGATGGGATTCTTATGAC
GATGCAGGTCAACTATTTCGCTCCATACCTACTGACGCAGCTGCTACTGCCGCTTCTCAA
GAACTCTCAACCAAGCAGGATCATCAACCTCAGTTCCATTTTAAATTTGATTGGTAGGCT
AAACTTTGAAAACGATAATGAAAGTGAGTTTTACAACGGCATTCTTGCTTATGCTAATAG
CAAGTTGTGCATTTTAATGTCCACTATTGAACTATCGAAGAAACTAAAAGACACAGGGAT
TGTGGTTAACGCATTACATCCTGGTTTTATATTAACTAATATTACAAGCTACTCGTCGAA
TATTTTTTATCGATTCTTATTCGCCATTGCCTGCTGGTTTAATAATATGACCGATGAAAC
AGGAGCTCAAACGTCAATATATTTAGCGGCTAGCGATGAAGGAGGCAGAGTTTCTGGTAA
ATATTTCGTGAATTGTTCGACATCTTTTATGGTTTCTCCGAAAACACGTAACGAAAATCT
AAGAAAGGAATTATGGGAGTATTCGAACAAGGTAGTAAAATTTGAGGACTCATGTATATA
ATGGTTTATATATTTATTTACATTTTTACTGGATACTTTAAATTATATCATCAGTGTGGA
AATTAAAAGTAGCATTTATTAGGTATCATAATATTTTTAAAGACAAGGTATTTTCGACTG
ATTATTTCGAGTATACAATAGTATTAAATCAAAGTTTAAGATATCTTTCTATTGAACTGT
ATTCCGTTGCTATCTTTATCTTTACAAGATTTTTTTTTTAATTATTACCTACGTGCATTG
TAATTATGATAATTCAAATATAATTTGAATCTATTGTCGTGAACCTAGATGAATCCAGTA
TATGATATAAGTCTATATAATGTGTAAATACTGATATATTTGATACGCGAGTATATGTTA
GCGTACGTATTACATATAATATAAACATTGAATTTTTATTTTGTGAACGATAACACAGGC
CTACAATGATTTTGGTGCCGCTAAAAGTAAAACTGATT
(2138 bp)

- SilkBase 1999-2023 -