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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11735c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739826_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030014 C CCR4-NOT complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
Transcript
Level		FPKM:16.41 TPM:16.08
ORF EntryO_TrvaFAMAMG14459_complete:A_TrvaFAMAMG_TR11735c0_g1_i1
Sequence
(Nucleotide)
TTAGTCTGCATCACGATCAATATCCATTTCCAACACTAAATAGACTTCACCGTCTGAAAC
TCATTTATTGTACCCAAAAATGTCCTTTATCAATTTTACACGTAAAGGTACTAAGGGTTT
ATTAATGCATCACTGATCAACATTTTTGTACTCCAACAACCATTAATCCTTTCTCAGAGG
ATAAAGGTGCATAACAAGACCCAATGCTGATGAAAACCTTCTTGATAGGCAACAGTAACA
ACTTACAATCAGGATATATTACAAAATCGATTTTCCACTGCTAAATAAATTTACATTTTT
TTGCTCTAGTTGCCATAAACAACGTCAACTGTGTATCAAAATAATATGCTGTTAATTCTA
GTCTGGAATTTTTAAAAACTTTTCATATTATGCAGTTCAGTTCATGAAACAAAGTATGAG
AGATGTTATCGATCAGGAATAGCTCACCGTCTTGAGGATTTGTATGAAAAGAACGAAATA
AACTTCTTTGTTTTTAATGATTCATATTTAACGTCAGTATAAGGTACAATGGAACATTGA
ATCACGGGCATCTCAATTTAATAAAGAAAAATATAATCTGCAGGGTGATAAATGATATAC
AAAAAAAGTGAGATTATTGCAACGACCGGACCGAATACGAATAAATAATCATTTTCCAAT
AAAATAAAACAAATACGTTAATTTATTTTACAAATTCCTATGTTATATCTCTCTGTTTAT
TGTATCACAAGTTCAGTTGGCGTCGATGGGTTCTGGTCGCGGGCGCGGGGCCTGCGAGGG
CGTGAAGCCGGGCGGCAGGGGCACGTACGGGGGCCAGGCGGGGGCCACGGCCGGGGCACC
GCCGTGCTGCGCGCCCACGCCCAGCGCGTTGAACCGCATGAACATGTCGTGCTGGTGCTG
CGACAGCGCGCCGGGCCCCGCGCCGTGCCCCGAGCCGTGCCCCGCCCCGGGCCCCGCGCT
GTGCCCCGCCCCCACTGACGTCGACATGATCGCGGGGTCCATCTGCGTCCAGTCAGAAAA
CATTGGACTGTTCGAGCTGTAACCTTGATGCGCGGCGTGATGCCTGGGTACTCCGACACC
GAACGAGTTGTTGACGTGACTGAATCCTGGCGGCGCTAATCTTGATCGACGCGCGTTGTC
ACCGCCCGAGACGGCGTTTTGCATCATTTCATTCTCCATTAGTTCTGCAAATGCTTTCTG
CGTTTCCTTGAATGGATCGAAGTCCAAGTCGTCGTCGCCGTCGCCCGCCGCGCGCCCGCT
CGTCTCGTTGTTACGCACGTTGCTCATTCTTTGTTTGTGTTCTAATTCGAGTGCCTCGGC
GCTGAGCACGTTGTGAGGCAGCTGATACCGCCTGTCATCAGTGGGCCGCGACATGAGCCG
CAACTGTTGCGCTTTGTGGAAGTCCGTGAAGAATTTATCCATATTTTCAGCTAAATACCG
TCCTTCGCTATTGTGTGCAGCATCGAATCCGTTGAGCATGTGAGTGTGTGCGGGCTGCAT
GAGCTGCTGGGTCCGCATCATGTAGGGCGACATCACGCTCGGCGTCTCCACGCACATGCC
GAACCCGCCCATGTTGCCGCTGCGGTGGTAATTACCTCCTAATAATTCACTAGTAGATTC
CATTCCTATACTAGACGAGGGCATGAAATGTTTAGGTTCGACCATAACACTGTGCTGCCT
CGCCAACAATTCGTTCTGTCGCATCAACATTTCATTCTGTTCTCTTTCCCTCATCAACAT
TTCCTTTTCTATCAAACCCTGGTTCATTTGTGTAATTGGCCTATCGTTAATGTACGTTGG
GTAGGGGTTGGTGAGGTGTCGTGTGACGTCACGCGGCGGGTCGGCGAGCAGGCCGTGCGT
GTCGTCGTCGAGGAGGCTGTGCTCGCTGCCGTCCAGCAGGTCGTGCGTCTCCAGTAGAGT
GTGTCGCTCCGACTCGAGCTCGTCCAAGTCGTTCCTGTAGTTGTCCTCGAACATTGAAGA
GGTCCCGTTTAACATTTTACTGTCCTGTCCGTTTTCATTGTGCTCGATGTTATTACTGTT
TTTGTGTTTGTTTTTGTCGTTTTTGCTTTTCTTGTGTGAGTTTGTGCCGTTCGTGTCTTT
GTTTTTCGTTTTGTTGCTGTCGGTGTGCGAGTCTTTTCCGTTTTTCGTGGGAGCGTGTGA
TATTTGCGTGTTGTTCTGTAGTTGCGTGGGACTCGACGATTCTGATGTACCATTTTCTTG
TGACTTAACGTGTGATATCTGGTGCATGTGCTCGGCGGCGGGGCTGTGCGCGGGCGGCGT
GGAGCCGAGGCTGGGCCAGGCCTCCTTGCCGCTGCTGCTACCGCTGCTACTGCTGCTCGC
GTCGCTGCTGTCGCTGCTGCTCGAACTGACATTAGAATTAACTACTCCGTTTATATTTGA
CGTTGTGACCACTGACGTTGATATAAAGTTTGAATGATTACCATCTTTTGAACCGTTCTT
TTCTGCATTCGTACTAGAATTACCTGAACCGTTAAGTTGTTTGTCTTCTATGTTTTTATC
CCGTTGTTGTGTGGCTAACAGCTGATTGTGCAACTTTCTCTCGTACACCTGATGGAGACC
CGCGTGCATTTCTTCTTTCGTAAACGACGCTTTGGAATCACCTAGGTCGTGCAGGTACAT
GCAGTCGGGCTTGGGACAGGGCTGGTTCTTCATGAAGTTGGCGCAGTACTTGGTGGTGCC
GAGCGAACCCTTCAGCACGCGTCCGTCGAGCGTCACGTTGTTGACGCCCTGGATGGCGCG
CAGGGCGTCCGCCGGCGACACGTACGTCACGTACGCAGACGCGGACGGACCCTGTGACCC
TGCATATGTCGTACTTTGGTTTATAACTACTTTGTGAATTTTGCCATATTTTCCAAAGTA
CTCTTGCCGTTTTAAAATCTCCGGGTCTGCGAGTCTCACGGGCAGTCCCACGACGAACAC
AAGGTTGTTCTGTACGACGCGCACGTTGGCGAGCGCACGTCGCGACTCTAACGTCTTGTT
GCGACGTTTCTGCTCGCGAGCTTTCTTCTCCGTCTTTATCGCGGCCACCTGCTCTTGGCT
GAGCGGAATGAAGTCTGCCGGGTTCTCTGGGTATGCTTTCCGGCATGCGGGACATAAACC
ATTCTCGCCTTCCCGGATACGATTCCAACAAAACCGACATATTTGGTATCCACATGTGCA
CGGGTAGAAGTGGAGATCGTCCACCTCCAGAGGTTCCATACATAGTGGACATTCCACCTG
TTCTTCTCCACTCTGATTCAACACTGACATCCTAGATCCAAGAGCAAATGGTTCCAACCT
GCCTATTGCAATTGATGTCAGCTTTCTCCCGACAATAACCTTACGTCTCCTCTCAAAGCA
AATCTTTTTTCTGTTGCAGAACCAAGACTGCTAACCCTTCAGCTAGAGACGAAGATTAAT
CCTTTCCAAAGGACCAGTAAGGAGCTTCACGAATCAATTTAAATTAAAATGCAAAGCTGA
AATAAATACAACTGCCTTTGAAGATATTTTCTGCGAGTTACTATACATTTGTTTTATGAA
ATGGCCTAATCTTTTACAAGATTCGTTCTGTG
(3572 bp)

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