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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11469c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_chondroitin_sulfate_proteoglycan_4_[Amyelois_transitella]
Ontology
GO:0000187 P obsolete activation of MAPK activity
GO:0001525 P angiogenesis
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0008347 P glial cell migration
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016477 P cell migration
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0030203 P glycosaminoglycan metabolic process
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030207 P chondroitin sulfate catabolic process
GO:0030208 P dermatan sulfate biosynthetic process
GO:0031258 C lamellipodium membrane
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0043202 C lysosomal lumen
GO:0048771 P tissue remodeling
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.33 TPM:1.31
ORF EntryO_TrvaFAMAMG14341_complete:A_TrvaFAMAMG_TR11469c0_g1_i1
Sequence
(Nucleotide)
ATCAAGACGCAATAGTGTTGGATATGGAATTGATACAAGAGACGAAATTCACGTTACCCA
GTTATCTTCAAGGACGGAACACCTTTGTCTTACACGTCAATGTAACTCCCGTAAACGACC
CGCCAGTTCTGAATCTTCTGCCGGGAAAAGTGCTTAGACTGACTCAGAATGTTTGGACTG
CTGTTAATAATTTGCTTTTTGTAGTTGCATGTTTTTATGACGCATGCCGCTCCTTGGCAC
CATTAACATTTATAATGATTACTATGTGGCACTCGTAAAGTAATAACTTCCGATATACTC
AAGGCAGAGGATCCCGATACGCCTGCCGAAGATTTATTGTATACTATACTACATGGAAAA
AATGAAGCGAATAGTGGTCACATTGAGATGTCTGGACAACCTGTAGATTCATTCACACAA
CATGACATTGACGCCGGATTAATATCGTATGTGCACGGAAGCGCAGGAGAAAAACAATTG
AATAAAACATCCTTAAGACTCACATTACAGGTATCTGATGGCATAGAGACCAGTGGTCCG
GGTATACTTAGAATATCGATAGTGCCTCTACAAGTCCGATTAGTGAACAACACCGGTCTG
CAGCTTGTTCACAACTCCTACGCCATCATAACTGCTGATAACCTTACCTTTGCAACTAAC
GCCGATGAGACTAATGTGCAAGTCAAATACGATATTGTGAAACCTCCACAGTTTGGTGTG
GTAGAAAGATTACGCGTCCTTGATGGAACGTGGCAAACTGTGGATTCGTTTACAAGTGAA
ATGGTAGCTTTCAATGCCGTTAGATACATGCATTTACTAGGAAATCCTAATCACGACGAA
TTCAAGTTCAAAGCATCAGTTGGATCGATCCGAACAAATACATTGTACGATTTCCGATTG
ACATTTATCAAACTCGAATTGTATCAATCGATTAACGAAGAATTAGTGTTGAATAACACT
AGAGAAGCGTTCATATCGGCACAGCATCTCCGATTTAAAACGAAACCGTTGGCCTTATCG
AACGATCGAATTGTCTATACAATATTGCGACCACCAAAATACGGTATTCTTCATTTATCA
TCCGGAAAACATCATTTGCAAGTTCACAACTCTTTCACACAACAAAATATCGATGCCGAT
CAATTATGGTATAGAGTACATCGACGTGCCTATTCGCATATACAAGACGAATTCCATTTC
GTTGTCGGTGCTACAGAATGTGAAAATATTACTGGAGTTATGATGATTAGGCATGTTCCT
AGTTCGGTAACTCTCGATCATGCACCGAACAGAGTCCGTACAACTTTAGAAAGGCTTCAA
GTAACAGAAGGTTCTAGAATGGTCATACCGGCAACGCATTTGAACTTCAGAACTGACGTC
GTCACTAACTTAATATTTAACATTACTCACTTGCCGAAGCACGGAAAGATTGAAGTCATT
ACGGATATGTTGAAAATTTTAAGAGACAATACGACATACTTTACGTTACAAGAGTTGAAT
TCAGATCGAGTTTATTACACTCATGATGATTCCGAAAGTCGACACGATTCGTTTCACTTT
ATGGCACTGAGTCCGGAGCCCGAAGACTTTCAATACGTTGGGGTGTTTCACATCGACATA
ATTTTGAAAAACGACAATAGCCCTGTGCGTGTTAATAATAACACATTCCACATCGTACAC
GGTGGCGCCAGGCTTATAACAGCAAGGGATTTGAGTTACACCGACGCTGACTTAGACACG
AAATCTTCGGATATAGTTTACACTGTTCAAAGATCACCTAAAGATCCTCCCAACGGTGGC
ATATTTAGAGCGGATAATCCTTCTGAGCAAATAGCGACGTTCACCCAAGACGATATTAAT
AATAACTTGGTGTTGTTCAAACATCAAGGCAAAGAGTACGGGAAGCTTGCGTTTTGGGTG
TCTGATGGACGATACGATGTAAATGGTAATTTGGAGATTCAAGCGTCGCCGCCGTTTATA
AGAATGTATCCTTCTAACGGATCTATTATGGAGAATGGGAAGGCGGTTGTGATCAGATCT
AGTGATATGCAGGTTGATACGAACATGAATTGCCTAGAGGAGGACATACGTTACGAGATC
ACTTTGGAGCCAAAACACGGTTCCATTGAAGTGGGTGATGGTCAAGGAGCCTACACTTTC
ACTCAACTGGACATAGGGGCCGGACGTGTTGCGTATCGACACAGGGAACCTAAGACACCG
GCCGATCAGTTCAGATTTAAAGTGATGTGTTTGGATACATGGGGCGAAGGAGTGTATTTA
ATAAAAATATTTCCATCAAGCTACTGGGAACCGTTGAAGGTTCAAACTAATACGCCACTC
TTCGTTGAGGAATCTACAAGCGTAAACATAACCAAAGATGTTTTGGAGATCATGCATCCA
CAAATCGAACCATCGAACATAATTTACAAAGTGACCGATGGTCCCAATCACGGTTGGCTT
GAAATAGCTACAACTCTCGGAACTCTAGCCGAAACTCATAACGACGAACCGATCCACACT
CGAGTATTCGATCAATCGATTATAAATTCGAATCGATTAGTCTACGTACAGTCAGGCGTT
AATCGAACTCGCGATCGCATTCGAATGGACATTACTAATGGAATCGTTTGGTTGCGAGAT
ATCGAGTTATCGATAGTCATAATACCGGAACATTTTTATATAATTGCATCGAATTTGACC
GTTGTTGAAGGGGAAGCGATCAGTATGAGACCGGAGATGTTTAGAACTGTCACAGATTAC
TATCGAGGTAAAGTGGTATCGTACAAAGTGGTCGATAAACCAAAGTTTGGTAAAATTATG
ATGGCTGATCAGGAATTGAGTTTGTTGCCAGTTTTGAAGCTGAACTCTGGTAATATTCAG
TACGTAAACGATGGTTCTGAAGAAACTTCAGATGTCATGAAGCTAGTTGCTATAACGGAG
AATAATAAGGAAAGCGAACCGTTCTACGTTCAAGTAACTATAGTATCGGTTAATGATGAA
ACACCGATAGTGGCTGCAAATACAGGACTGTGTGTTTGGGAGGGAGGCAGTTTTACATTT
ACTAGGAGTGAACTTTATGTAAATGATATCGATACTCCGTTAGAAAATGTGACGATTCGA
GTAGTTGACATTGTGTCAGGCTATATTGCTCTAAAGGATAATCTTGATAATGCAGTTGAT
CATTTCACTCAAGCCGACATCGATAAAGGAATAGTTGTTTTTGTGCACAAAAATGGAACA
AAAGGCAAAATGATATTCAATGTGACAGACGGATTGCACGAACTTTCCAAAATCACATTT
CTCATATCCACGAAATCGGTATCAATAAAAATAATAAGAAAACAAAATCTACGAGTGTTT
CCTCTCATGAGAGAACCTCTTACTAACAACATTCTGATGTCGAAATGCTCCGATCCTTCC
CGAAGTGTCGTGTACAAAATCGAGAGGTCTCCTACTTTAGGTAGATTGATAATGTTGAAC
GGTGAAAACCATCACAGATCGATTAAACAGTTCACTCAGCAGGATCTTAACGATTCAATT
GTGTATTACGAACACACACATCCATTCTCTGATCTGTACACAAATGATTCATTCATATTC
AGCGTTGAAACAGCTTTGGCAAAACCTCTGACAGATCAAGTATTCAACATCGACATCTCT
GTATCGTCTGGTGGACTGTCCAAATATGTTCATATTCCTCTGATAAAAGTGAAAGAAGGT
GATAAAGTACCAATCAAAGTGAATGTGTCTAATGTCATATCGTATTTGGAGACTCAGGCT
GGTTTGCGTCAACCACAAATAGAGGCTCAATGGACACAACCTTCGCACGGAGAACTAAAA
CCATTCTGGTTGTCTTTGAACCAGAATCAACTTGAAAATGGACTGGTAAACTATGAACAT
GACGATTCAGATACTTTGAAAGATAAAATCGATATGTCGTTATACTTATTGCCGGACTAT
GTTCTTCTTTGTAACGTCACAATACCGATTCACATAATACCGGTTAACGATCAACCATTC
AGACTGTTAACTGATACACCTCAAATACAGGTCGTTCAAGGAGAGAATTACACGATAACT
AAAAACGATTTGCTCACCGAAGACGCTGATACCAGTTCATCTGACATTTTGTACGATATT
ATAAGCGGGCCCACACAAGGAAGGATTGTGATGGTTGATAAAAATCAGACCGTTGACGAA
GCGCAGTCAATCAATAAATTCACTCAAGACGATATCAATAGTGGTCGGGTGATTTATGAG
CATTCTGGTATATTACAAACGGCTACCTTCTACTTCAGAGTGTGGGATGGCAAATTCAAA
CCGACGTACACAGTGTTCACTATTGACGTTGTTCCTGTCATATTAAATGCGACTTCGCTT
CATCCTATACATCTACAACAAGGCTCTAATGTTGCCTCGATAACTCCCGAACAAATATAC
GTAGAAACAAACGCGAGAGTGTCTAAAGTTTGGTACAATGTGACTCGGCCTCCCATCCAC
GGCTTAATTTACGTTAGTAGCAATCCCGTCACATATTTCTCACATAGAGACTTGATGGAT
AAAGTTGTAATTTACATGCAGAATGACATGACGACAGCTAACGATAGTTTTGAATTAATC
GCGTGTGTACACAATAGTAACGCGACAACGCCATTCACAATAGAAGTCATAGTACAGCCT
TTGATGACGTTAGGAGATTTGAGGGTAGAAAACGATAAAGTCAAGATCACACTAAACACT
ATGGATGCGACGAGTCTAGCCAAATTGACCGTTAGTAATCCAGTGTATACTTTACTAAGG
AAACCTAAATATGGGACAATAAAGAAAATTATACGGAGTTCTGGTGAGAAGACGAGTGCA
AGAGAGCGAGAAATAGCTTATTTTACACACGAAGATTTGAAGGCCGGAGTGATATATTTC
GTTATTAAAAAGAAATTGTCCGATTTGAATGGAGTAGAAGATAATTTTAAGTTTTTGTTG
GCGACCACTCTGTTTCAACCTGCGGCCGGTGAGGTGAAGGTTATAATTGGTAATAGACAG
AAAAAGAACTTGCCAGGCCCTAATGATCCGGAAGGTCACGAAGGCATTCCAGTGGTAAAC
ACCGAAGCTACATCCTACTACATGATGATACTAATGGCTCTGCTAGGGACAGTGCTAGCG
ATCGTAGTAATATTCGCTTTGATCAAATGCCGTCGAATTCTCGCGAGGGACCAAAACGCT
TTAGTGAAGATACACGGGCAAAGTCAGGGAGCCGTCGCACCCATACCTTTGCCGAGACCT
CCCGATCATCTGATGCCTTCACCGAATCAGGGAACACCGCCTATTAAACGTTACGTATCG
TCGGAACAATCGGTTCACACCGGTGCGAGCACTCCATTGCCGTCTGGAGGTAGCGTGGCT
TGCAAGGTTACGCCTCTCGCCGACGCGGGCATGCCGGACCTCAACACTAGATACCCGTAC
GGAGCTGAAGACCATACTGATGCTGAAGACTGGAGTAGTTACGAGGCAAGCGAATCCGCC
TACCCGATCCGAGCGCCCGGCGTCGCTCCCACGAACCCAATGCTGAGACGCAACCAATAC
TGGGTCTGACCCAAGCACACCTTCACGCTACCCAGGCCGCCCAGACCAGTTATTCTGACT
ACGCATAACGATTGCGTCACACTGAGCCGCCGGCGACGCGTTGAATTAGTTCCTACGCCA
TTTCTATTGAGCAACTACAAAGTAACGCGAAAACAGGACACATGTGAAATAACGCTTTAA
AACTCCCGCCACCAATACCTCTATCCCGTCCCTTCCTCTATAGTTTTACGAACAAACATT
TACATGAAACTTAATGATAATTTAAAAATAAATCGAAAATTGGCTACTTGTTGTATTTCA
AATTAACAATTTGTCGTATCAAAGTATGGTACGCAAAATGCGGACGTGTCATGGCGTCGA
TCACGTGATTCGTTTCGCAGTCTTTAGTAAAATATAATTTCGAATTAAAGTTCTAATATT
CTTTTTCAAATTTACATTAATTTCAATCATAAATTAGTGGTTCAATTTGAGCCATGTTTA
AATAGCCAATTGTGGACTACTTGTTATATTTTGTACGTTTTCGTGTTCCTGTTCTATAAA
TAGAAATTAAGATATTTCGCTTTGATTTCAAGTGTTATTCATTTTATCAACCGACATGTT
AAAGTTGAATACACATTTGTGAACTTGTGAAGAATCGTAATAATTTTAATTTAGTCACTT
AACTCGAGTTTTTGACTAAATAAATATTTTGCGTATTTATATTTCAATAATATGCCGTAT
TTGAAAGGTTCTACTTTCATTAATAGCTGTTTCTCTTGAAAGAAGCGTATGTGTGCCAAA
AAGTAAATTAAAGCAATAATAAAATCATAGGAATTGAAGAAATTTATTGAACGTATTACG
AAATGTTTTATCTCGTCTGTTACGTTTTAAAATTATAATGTTTCAATATTCGATTACATT
TAAATAGTGTTATTGCACAATTAAATAATAGTTTAAAAAGATTTATATAGAACGTTAACT
TTAATTGATTTCTAAACAGAAACACATGAATTCCAAGTATAAAGTAAATTTGATTGAAAT
TGCATTGCATTTACCCAAAATTTGACACCAAATAGGAATAGATCCCATCCTAAATGTATG
ATAAAAATGATAGAAAAAAAACATATTCATGCTTTGCTGCAAGACAGCTGTATTTAGAAG
TTATAGAGAAATAACTTCGAGTTGGATACTTTAACTTTGAAATGAATACAATGACATGCT
TTAGCGTAAACCGAATTCTTATCACGTAATACCTCTTTTCGTAGACTGTATTTTAAATTA
AAAAAAAAATAATAAGATAGTTTTAGACCGCTTTCGATACTAAATTAACTTAACAAGCAA
AAATGAAAGCGTAAACATTAATATAATGCTCATTAACTGCCATTTTAGTGATAGTTATGA
TCCTGATTAGTGCCAGCTAGTTCACTCCCAAAGACAAGGCGAAAGACATTATACGATTAA
TTGATTAGTCTTTATAGCTTTGCAAAGAACATAGTTTAAAAAAAATAAGAATTGTCTATG
GATGACAAATAAGTAGATTTTTCACTCATGAATGTATTTGTAGTAATAATCAATTATCGA
TGCATTAATTTTGACAAAAGTCTCACGATAGAAATATATATTTTTCTTTTGGATATGTTG
ATTATTGTGAAGACTCGTTCAGAAAGAACAAAGAATTTTTTGTATATCTAAAACAAAATA
CAAACGCACATATAAAAAGAAATGTTATAATAGTGAATTATTTAGTAAAATTTACGTGCC
TAAAACACAAATGAAAAATATTATTGCCAACAAACGGTGCCAAATAAATGAAAAGTATAA
(7380 bp)

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