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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11462c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_pore_complex_protein_Nup88_[Bombyx_mori]
Ontology
GO:0000055 P ribosomal large subunit export from nucleus
GO:0000056 P ribosomal small subunit export from nucleus
GO:0002376 P immune system process
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006955 P immune response
GO:0007424 P open tracheal system development
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0031965 C nuclear membrane
GO:0035147 P branch fusion, open tracheal system
GO:0046826 P negative regulation of protein export from nucleus
GO:0051028 P mRNA transport
Transcript
Level		FPKM:3.61 TPM:3.54
ORF EntryO_TrvaFAMAMG14318_5prime_partial:A_TrvaFAMAMG_TR11462c1_g1_i1
Sequence
(Nucleotide)
GACAACTCTTCGTAAGAATTTTTTCCGTCTAGCACAACGCGCGATAAGGAACTTCGTTCC
AAAAAGGTAACAACTAAATAAATCTTAATAGTACAAAATTTAAACAATACTGAGTTGATC
CTTGAGTAGTTTAGTTTCTTCAATTAATGTTGATAATTGTCCGGTTTGTTGTTGTAAAAT
AGATGAGATGGTCTCGCTGTGCGATCTACCCAGTGCGATATCTTTTTTTTTTATATTCAT
TACGCCATTTGTCCATCTGTTCTGCGTGCAGCCTCGCCTTCTCCATCATCAGGTCGAGTC
GCCGCCGCATGTGTGCGTGTGAGAGCGCGTGGCTCCGCAGCGTGTGTAGGAGCGTGTTCT
CTGCGCTGGAGATGGAGCTGTTTGCGCGAATACCGCGGATCACGGCTGAACATCTATTAT
TAAGTATTTCTTGATGTTTTTCAGCTATCATACACTTTTCTTTCAGTATTGTTGATTGTA
GTTGAACATTGTCTATGTCGGCCTTGAGATCAGCCGTCCACTCCTGGTACTGGTGGTTGA
GTGCGGAGAGAGAGTGCAGCTTGCGGGAGACGGCGTCGCGCGCTCGGAGCTGACGGGACA
TGTACTCGCTACGAAGCTTAAGCGTCGCTTGGGTCACTAACTCTAAACACTCTTTAGGTC
CCGGTTCGGTCTTCTTGTCCAAATTAAGCAACGGCTGAGATGTTTCGCGCGCTAATATCT
CTTGTATTATAGCTGTGAACGATAACTTTTGACGCTCCTTTAAAATATCCTTAATGTCTT
GTAATTCAAGAGCTGGGTTCTTAAGTTGCATCTCATTGTAAAGCTGTTCTTCCAAACAAT
AAGGCTCTAAAGGTCTGGCTACGAGCAGGCCGCTCCTGCACAGCAGCAGTAGGACCGGCA
GTAGGTCACGTGACGTGTGCGCCCCCACCACGGCGCCTCGAATCACGTGACTGGCGCGCG
ATGACGTCACACACACCGCGCACACAGACTCGCCTTCCGCTTCATCACTGAGTGCATAGT
CCATAAGTTTTTCCAAAATTGGCAGAGACACTGTGTGGGCCCCACCAGCGTGTATGCAAG
CGTATGTGTTGTTAGTACACTTTAGCAGTTGCACGGGATACGAATCGATGTCGCTACCAT
CGGAACTCGACATAGTATTCAACTCGACACTTTCAACAACGTATAAACCGTGACTGTCCT
TGTTGCTATCCGTTTTTTCACTATTTGGTAGCAGCAGACAATGGTACAGAACAGCCGAGC
TGGTTGCTATGACAACCAATGGAGGAATATCTCCTCCCCCCATACAGAGGATACAGCAAG
AATCCGAACCGTAGTTGTCATCAGCTGGCGGGTATATAGCTAAAGGACCTGACAGTTTTG
GCTGGAGAGGACTCTTACTATTCAAATCACATTCCATCATATAGATCTCTCCATCACCAC
GCAGAATGAGAAGGTGTTCCCCATCAGGAGTTGGGGTGAAGTCCACTGCTGTGTCTCCAA
GACTGTCCAGAATGGTCTTCCCGGCTAACAGACTGGTCGGTTTTGGGCCCACTGAGTACG
TCTTGACCAGTTTTGGACCAGTCTTTAGGGCGACGTTGTAGAGCCTGATAGCGTTATTTG
ATACTAAGACCAACACGTGAGAGAGTGAATGCGGATGCCAGTGCACTCTCCGAATCTCGC
CCGTTGTATACAGGAATTTCTCATCGAGGCTGTAACTCTTGCAAAGCACGGTCTGGTTCC
CGGAATCGAAGAGTCCACCACGGCCCCAGCGAGACGGTAACTCGACGATGGTGACGCCCT
GGGTACCCCACACGCAGATCCTGCTGCCACAGCTGCTGGTCGACACACGTTCCACTTCGA
ACGACGGTGGAGTCAAGAATTGGAGTTTCTGATACGGGGTTTTCTCTCCATGTTCCTCCA
AGTGCTTCAAGTTTATAGAAAACAAACAACTTTCAATTGAGTTCCAAACGTAAAGAACAT
CATCTCTCAATTCGAGCAAATTTTTCAACTTTCCGTCGTTTTCATCCACAAGACTGTCTT
TTAAATCTATAAATAACTTATGATTTGCTAATTTAGTATCGTAAAACCGTAAATCCATGG
TGAAAATCAAGAAATTAAACTTTGTTTTGGTTAACGAATACTGTCGGTGGTTTCG
(2155 bp)

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