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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11451c0_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_chromobox_protein_homolog_5-like_[Amyelois_transitella]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0005730 C nucleolus
GO:0010369 C chromocenter
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030674 F protein-macromolecule adaptor activity
GO:0035064 F methylated histone binding
GO:0035097 C histone methyltransferase complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
Transcript
Level		FPKM:11.25 TPM:11.02
ORF EntryO_TrvaFAMAMG14277_5prime_partial:A_TrvaFAMAMG_TR11451c0_g3_i1
Sequence
(Nucleotide)
CAGAGTTCCACCATTTTCCCTCCTTTTGCTTTGCTTTAGCATATTTTGGAAATACCGTAC
GTATTTGACGAAATTGAATATGCGAAAAATATCAAAAAATCGTACCGATGACGATTTAGT
ATCGTCTACTAACGGATCTTTGTTAAATGATGATCAAACTGTGTCGGAGAATAACAAAAC
AGTTGATTCTGTTACTGATGAGAGCGTCGACCCTAACAATGATGATATTTCTAACAACTC
CAAAGAAACAAAAAAAGGTAAATCTAAAGGGAAATCTAAGAAAAGCAAAGGAGCTAAAGA
TAAAAGCGTAGTTGAAGAAGAATATGAGGTAGAGAAGATTGTTGATTCTAAGAAAATCAA
AGGCAAATTGCATTATTTGATCCGTTGGAAAGGATATTCTGCCGACAGTGATACTTGGGA
GCCTGAGCAAACTCTTTCTTGTCCTGATTTAATTGGAAAATTCCTGGAAGAAAAGGAGAA
TGCTAAGAATAAAGAAAAAAAATCACCTGCTACTTCTCTAAAAAAAAAATCTAAAAAGAA
AAAAGAAAGCAAAACGCCCACTAAGAGAGCGAAATCACGTTGGGACAGCAATGATGATGA
AAATGCTGAGTATGAGGTTGATCGTATATTGGAAGTACATCACAAGAAGAATGGTAAAAG
AGAGTTCCTGATTCATTGGAAAGGCTGGTCCAGTAAATTTGATTCGTGGGAACCAGAGAG
CAACTTAAATTGTTCTGACCTCATTAAGAAGTTTATGGATAAAGTCAGCAGCGCCCGTTC
AATGGATTCACGAAATTTAAGAGTTGCTCCGGAAACAACAAACCGATTCACTTTACAAGA
TCCCAGCTCCGGACGTCGCCTCAGCAAAAGACGTGGACAACGCCAAAGGGTGCGTTATGA
TAATGCAGAATGATAAAAATAAGTTCTATGATTTCTTGTATACCAAAACTTCAAGAATTT
TTGTGGTTATTGTGTGTTCTTCGATAATGTGGATGGATAGATTTTTCTTCAAAATTGTTA
GATATTTACTTGGGTATGATAAGTATGTTTTAATTGAATGTCAAAATACATAATAATGTC
TTTTAATATCAAGGTATGAAGATACAATTTATTACTTTTAAGTGTGTTTTTTTAAGACTA
GTTAATAAATATTCCCTCTAAATATATTATTGTTGTCTAAAATAAAAATAAGCAGTAGGA
TTATTATGTTCTCTCATAGTTTCTATAAATTCTCTATTAATCTAAATAGTACATGTACAT
AAAGTATGTTCTTGAAACACTATACAACTTCACTACTTTAACAGAATATTGTTGTGTATT
ATGTATGTGTGTCTTAAAAGTTAATGTTATTTTATATTTTGACACAATCATATTAACCAT
GCACAAACAATATCCTTGTAGTCAGATTTAAAATTATTATATGTAAAATTTACGCATAAA
ATGTATGTAACTTAGTGACACAGTGAAACAGATTTTTTAAACTACTTTATATATTTCAAT
TAGAATGATAAACACAATAAAAATATTAAATGACCATTCTAAATAGTGCATTATTATTTA
TATACATAGTGAATCTTCAATGATTGTGCATATTCAAGGAGGGTTATTAGTACTCTATTC
TAATACAGAATACAGGGTGTATCTATACTTTATCTCAGCTAAAGTGGCGTGAGTGACCTG
TCGAACTACAACTTAGAACCACTTTTATTTTTGTATTAATACCATACAATGTTTAAAA
(1738 bp)

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