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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11441c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_transport_protein_Sec24C_isoform_X1_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030127 C COPII vesicle coat
GO:0048208 P COPII vesicle coating
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:30.18 TPM:29.57
ORF EntryO_TrvaFAMAMG14257_5prime_partial:A_TrvaFAMAMG_TR11441c0_g1_i3
Sequence
(Nucleotide)
TTTTTTTTTTTTTTAAAAAATAATTCAAATATATTTTATTTACAATTCCAGACTCCTTTA
TAACAATTAATAACTAAGAACATTACATAATAATAACAGAACTAACTAATTACGGGTCCG
CCATAGTAATATTTAATTTTATACCAAACAAAAATGGTCTTATTTTACTTTGTCAGTATA
GCAAGATAAACCATTTTTGTTAGTTCTAAAATACTGTAGTTAACAAGGTTTTCAGTGTTG
TGCCACTTTTAAAGGGGCCACACACCGCAGAATACAGGGTGTAAAATTATATGGTACATA
TTCAAGGTCATGTTAGTTGATATACAGGGTGTCCCAGGACTATGCGACATGAAAGGGCAT
CATTTTTAATAACTGTGTTCAAAGTTTCTTCATAAATTGTTTGGTTCGTCGGAAAATGTA
ACTAACAAAATCGGGAAAAACTACACCTTGTACTTTATAACGTCAATAGAAAGAACAATT
TAGAAAAATAAGCCGAAGGTAGCGGCCTCGCAGTGTCTCCTGACAATGTAATAGAGGTCC
ATGAGCAAAGGTGACCGCTTACGATCTGGTAGCTCGTCTTCCTACGAGGCAAAAAAATCC
CTCCAAACATACATGGTTTCAAAATAACGTGAAAATTTAATTGAACATGTCAGTCATGAG
ACACCCTGTATATTTTATATCAAAATCGAGTATTTATCACCCTCCTTCAATTTGTACCAC
AATTCTAGTATCACCCTGTATACATAATAAGATATGGAAAAAAAAATTGTATTCACTAAT
AACTTGATACTCCTTAGGCAAACCCCAAACGCTATGTTAGAATACTAAAAAATCGAACTT
CATTTAAAATCGATACTGTCAGAATCGATTTAACAATTCGAATGATTTGTTTAGTATTCA
AACATCAGAACTAAAGCTAAGGTTACATGCGAATCGGTACACGGAATAAAACATTTTTGG
CGCGAATTTGTTTTCAAATGAAATGCGCCATTCTTATGAAACTAGAGGGAAATAGGCACA
TCGTAAGATCCAATATAAATAGGTGCTTATTGTAATTTTAAGTCGTTTTTCTGACATTTT
TATACAAGTTGTTCAGTACAAGGGAAAAGTACATTAAAATCATAATTTTATTGTTCCTGT
GACTTATTTATCAATGGCGTATATAGCACAGAAGTCGACTCACAACGGCTTACTTTGTAG
ATACCCGCATCTAAAAGTTAATCTTAAGCATAGTTTCACAGATAATAAAATATACTTCTC
TTCAAATTGACCTCTGAATAAGCATACCAGTGCTATTACTTTAAAAAAATGCAAATATTA
TGTCTTTTCCCATCGAAGTTTTAATATCTCCTCCTAGGAACGTATGTCCTAGAGATTTCT
TTTTCATGCTATAGTAATTGTCGGATCTCCTTGTGGACGTGGCACAGGAAGTCGACGTAT
GACGCACTTCCGTCCACGCCGCGGTCCTCGACCAGGAAGTGACGTAATACGGTTTCTAAT
TTGTCGTGTTGTCGCATTATTGTTAGATCATTTTCTGTATCTGTTTGTGAACGGCCAAGA
GATACTCGGTGTAGGATTCCGTTCCATCAATGGCTCTGTCCTCGACCAGCATCCTCCGGA
GCTGGAGTTCTTGTTTGTCGTACTGGTGGACCACAAGCAACCTCATACACACCCTCCTGT
CCCTCCTGGCCCGCTGCAGCAGCGTCCTGACGTGGCGGCTGAGCGGCGTGTCGAGGGAGG
GCAGCTCGCACACCGCGGGCTCGATCTGCTGCGGTGACGTCACACCGAACACGTCGCGCA
GGAAGTCAGGGGAGGCTTGGGAGCCCACCCATAGGAGCATGTGGACGCCGTTCTCTAACA
AATAAACTCCGAACTCGTTCATCTTGTCTATGGAGGCCCGCAGCGGAGTGAGGCGCGCGT
CGGGCGAGTCCGCCAGCTTGTGCAGCGGGAGCAGGCGAGGGTAGGTGTACACCACGGACG
TGCTCACGTCGGCCGTCAGCGCGCGGTACATCGCGCACGAGCGGTCGTCGCACGTGATGT
CGGGACCGCCGGCCAGCGCGTCGGAGCGCAGCAGACAGCTGGTGTAGAGCGGCAGCAGCT
TCATGGACTCGGGCAGCACCAGCTGTCCGGCGGCGGAGGGCGAGGCGCAGTGTCTCCTGT
AGGCGGCGAGGGAGCGCGCACACCGCGCACTGAGCGCCTGTCGCGCCGCTCGCCCGCCCG
TCTCGCGGATGGACCACACGGCCTGTTTAGTAAGGAAGTTGATGCAGGTGTCCAGCTCCA
TGCTCCGGTACACGTCGGCGAGCTGGTGGGCTACATTCAGCGCCAGGTTCAGGATGCGCA
GCCTCCTCTGTCCGGAGCGGTGCGTGTACAGTAGCGCGGCTTGTATGTAGACGCCGTCTT
CGCCCGTTAGCTTGTCGTCGTGTTTTATTTCTATTCCTATCGCTTTGTCGGCGTCTATAA
CAGCGAGCTCGACGTCAGTAGTGTTGGACATGTAGAGATGTCCGTAGAAGTCGGTGGGGC
GCACGCCGGTGGAGGTGCGCACCCGCATGACGGCGTCGTGCGCGGCGGGACGTAGCGCGG
CGCGACGCACGTCCCACATCAAACGGGAGCCGTCGCTCTCCGCAGTAAAGTAAGTGTATT
TGTAGAGTTGTCCCCCGGTGAGCCGGGGCAGCTGTCCGATGGTGGCGGTGTCGATGTATG
CGTTGTTGGCCGCGAACACGTGCACCGCCACGCCGGCGGCCGAGCACGCCTGGCCGAGCT
CGTTGTACGACGTGTTCTGAGGGGCTAATATCTGTTTCTCCTTGTCGGTGCCGAGCAGCT
TCCTGTCCTCCCTGTTGGCGAGCTTGCCGGGCGCATTGTATGTGGGCAGCGACGTGTGGA
ACACGAACAGCTGACCCGACGTCTCCGCTGCTTTTAGGGCTTCCAGACCGGCCTGAACAG
CAGGCAACATGACCGTCTCCGTCTCCTTATTATCCTTGAACATGACGGGGATCTGCTGCA
GCAGGGACGACAGCACCGAGCCGCTGTCCTCGGCTCGCTCCAGGAACCCTTCCAGGATGG
GCACGAACATGTCGCACACGTCGCCCACCGACAGCATCTGGGCTTGGCCTAGGGTGCCCT
TGATATTGTAGAAATGAACTGTAGAACTGTATGTTATGAATCCAACGCGAGTGTAACTCT
TCCCTTGATCGTCTTTCGGTAATTCGTCGATGATGTCCAGAATGTTCTCGCAGACGGTGT
CGACGAGTCCGTTCTTGACGGCGTTGTACGACACGTCGATCACGAACACGATGGCCGGCG
GGTTGGGCAGAGTGTTGTTCCTGCAGTACTCCTTGGTGGCGACGATCTCGTACGCTCCGA
GCGCCATCTCTGCGGGCACGCGTCCGTACTGCTGCATGCTGTTCACGTACTGAGTGTACT
CCATTGGTACTTCTGTTGTAGCTTTACAGAATGCGCATTTAAAATGGCGTCCTGCATCCA
CGAACTTCATGCTGGGACACATGTAGGCCTTGCACCGGCTGCAGCGCACCGGACCCATCG
TGGGGGAGCCCGTCAGAGCCGCGAAGTCTAGCAGGGGAGGCTCCAGCTCTTGGCCTATTG
TCTCTGCCATTGGGGATACAACCAAACAGAATGGCATCGCGGTTTGTTTCAACAGATCAG
CTGTCACCGGTATTGTGTACATGGAACTCCTGATGTAGCGAGGACTGGCGTTTCCTTTAT
CATCCACAATGAAATCGGTGGTGACCAGCGGTGGAACGAGACCTTTACCGTTCGTCACAA
ACACACCGCCGCGGTTCTGCTGGTCATCTAACATTACCTCGATCGGGCTAGGCATCTGAT
CCGGGTCAAGCGTCTTCTGTGGCTGCTGGTACTGTTGCCCAGGGTAGCTGGGCTGTTGAC
CCGGGAAGGGAGGCTGGAACTGAGGTGGGTACCCCGACTGCTGGGCTTGATACTGCTGGG
CATGGCTTTGTGGAGGTAGGGGAGGCATACCAGGAAAACCACCAGCAGGTTGTCCTGGAG
GCCCGTATCCCGGCTGGGCAGGAGGATTGGCAAACTGTCTCTGTTGACTTAATGGAGGTG
GCATATGAGGCATACCGCCCATCTGTTGGTACGGGCCTTGCGGGCCATAACCAGGTTGTT
GAGGTAAGCCCGGTTGAGGTGGAAGCCCTGATTGAGGATTAAATCCGGGATGACTGTGTG
GAAGCCCTTGAGGTTGACCAGGTTGTGGAGGTAGCCCAGGTTGAGTTAAACCAGGTTGCC
CTGGTTGAGATTGTAAGCCCAGTTGTCCTGGTTGAGCTTGCACACCAGGTGGTCCAGGTT
GCGGTGGGAACCCTGGTTGCCCAGGATGAGATAGCATTTGCCCGGGTTGTTGGAACCCAG
GTTGACTAGTAGGTATGCCTTGCTGGTTCATATGGGGAGGTAATTGCTGTCGTTGTCCTG
GCTGTTGTGGAAGACCAGGCTGCGGAGGCATTCCAGGTTGTGAACTTAAGCCTTGGTTTG
TTGGTGGGCCATGAGGACCTTGATTAGGTTGACCTGGTTGTGATGGTAGTTGACCCGGCA
TTGGCCCAGGTTGTGGGGGTAAACCTGGTTGTTGCCCACCAGGCTGAGGGCCTAATGGCT
GTTGTTGAGGTCCTGGCTGTCCAGGCATAGGACCAGGCCTCGACTGCGGTCCACCAGGTG
GCAGTACTCCAGGCTGAGGCTGTGGTGGACCTTGTTGAGGCATTCCTCCGGGTTGTGGCA
TCATTCCCGGTTTAGGTTGATTAACTGGCATTCCTGGCCTTCCTGGAGCTGGTTGCTGTG
GAAAGCCACCTTGAGAATGAGGTGGCATTTGTCCAGGCATACCCTGCGGTTGACTTGCTG
GCGGCATCTGCCCGGGCATACCCTGAGGTTGGCTCATAGGTGGCATTGGTTGACTTGTTG
GTGGCATCTGCCCGGGCATACCCTG
(4945 bp)

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