SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11438c2_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_myosin-IB_isoform_X1_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032528 P microvillus organization
GO:0042623 F ATP hydrolysis activity
GO:0042742 P defense response to bacterium
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
Transcript
Level		FPKM:44.66 TPM:43.75
ORF EntryO_TrvaFAMAMG14236_complete:A_TrvaFAMAMG_TR11438c2_g1_i1
Sequence
(Nucleotide)
GGCGGTGATGAGTATGGGGGATTCGCGTTGGATCCTTCGAAGGAGTCGCTACGTTGTTGT
GTAGTAAATTAGTGAGATGACAGAGCAAGATTCTGTGACCGTAGCTCAGGATTCGCAGCC
CGATGCGGTTCAAATCGTTGAGAATGGAGACGGACCTGAATTATTGGACCCGCCAAAAAC
GCTCATCCGTCCGGTGTCAGTCCAAGGCGTGATGGAGCATGCTCTTCAGCACCGTGAGAG
GGTCGGGGTCCAGGACTTTGTATTGTTGGAGGACTACCGCTCCGAAGCCGCCTTCATTGA
TAACCTGAAGAAACGGTTCCATGAGAACATTATTTATACCTACATCGGCAATGTACTGAT
ATCCGTGAACCCGTACAAGAACCTACCTATTTACACGGAGGAGAAGACTAAACTGTACTT
CAAGAAGGCGTTCTTCGAAGCACCACCTCATGTTTTTGCCATCGCCGACAACGCGTACCG
TTCTTTGGTTTACGAGCACAGAGAACAATGTATCTTAATTTCAGGCGAATCCGGTTCGGG
CAAAACGGAAGCATCAAAAAAAGTTCTAGAATACATTGCCGCTAGAACAAACCACCTCAG
AAACGTGGAAACCGTCAAAGATAAACTATTACAAAGCAATCCGTTACTGGAAGCGTTTGG
AAATGCCAAAACCCATCGAAATGACAATTCCAGTCGTTTCGGCAAATACATGGACATACA
GTTTAACTACGAAGGAGGTCCTGAAGGTGGTCACATCCTGAACTACCTCCTGGAGAAGTC
CAGGGTCGTCAGTCAGATGCAGGGCGAGAGGAACTTCCATATTTTCTATCAGTTGTTGGC
TGGTGGCGACCAGTCGTTGCTGGATCATTTGAAGCTTCAGGGCAGACCTGAGGCTTATAA
GTACACTTTGGACACGGCATCAAACGTCAACCAAAGATCCAACGACCTAGACCAGTTCCG
CATCGTCCAAGAGGCAATGAAAGTCATCGAAATCGGCGAAAGCGAACAGCGAGAGATATT
CGAGATCGTCGCCAGCGTCCTCCATCTCGGCAACGTGAAGTTTGTGCAGAACGAGAAGGG
ATTCGCCGAGATCTTGTCTCATGATGCTAATAGTGGAAATGCTGCTGATCTACTCAAAGT
AGACCCGGCGACACTACGCGAGGTTCTAACAAATAGAACAATCGAAGCACGAGGTGATGT
CGTGAGCACACCACTCGACATCGAACAAGCTCAATACGCAAGAGACGCTTTAGCTAAAGC
CATATACGACAAGCATTTCAGTTGGCTCGTGTCTAGACTAAACTCATCCCTGGCCCCCCG
TGAGAAGGATGCTCAGTCGTCAGTTATTGGAATCTTGGATATTTATGGGTTCGAGATCTT
CCCTAAAAACAGCTTCGAGCAGTTCTGCATAAACTTCTGCAACGAGAAGCTACAGCAACT
GTTCATTCAGCTCACGCTGAGACAGGAGCAGGAGGAATACCTCAGGGAAGGCATCGAGTG
GGAACCCGTGGAGTACTTCAATAATATCATTATTTGTGATCTTATTGAAGCTAGGCATAA
AGGTATAATTTCGATCTTGGATGACGAGTGTCTTCGTCCTGGAGATGCGACCGACGCGAG
TTTCCTCGACAAACTGAACCAGCATCTAGACGGACACCAACATTACAAGTCTCATCGGAA
ATCTGATACCAAAACACAGAAGATTATGGGCCGTGATGAGTTCTGTCTAGTCCACTACGC
CGGTGAAGTGACGTACAATGTGAACACGTTCTTGGAGAAGAACAATGATCTTCTATTCAG
AGATATACAGAGTCTAATGGCGTCTAGCAACAATACTATTGTTGGGAGCTGCTTTAAGGA
CATTAACTTAAGGAGCAAGAAACGTCCGGAAACAGCTATCACTCAATTTAAGAACTCATT
GAACGATTTAATCAAAATCTTGAGCAGCAAGGAGCCTTCCTACATCAGATGTATCAAACC
TAATGATTTCAAGGCGCCAATGCAATTCGATGAGAAGTTGGTATCTCATCAAGTGAAGTA
TCTCGGTCTGATGGAGAACCTTCGCGTGAGGCGAGCTGGCTTCGCTTACAGAAGGACTTA
TGAAGCGTTCTTGGAGAGATACAAATGTCTGAGCGCTGAAACATGGCCGAACTACCGTGG
CTTAGCGCGCGATGGAGTCCAGAAACTAGTCGAAGCTCTCAATTATGATACAGAAGATTA
CAGGATGGGAAATACAAAAATCTTCGTTCGTTTCCCGAAGACATTATTCGAGACAGAAGA
CGCTTTCCAAATTAAAAAGAACGACATCGCAACAATAATACAAAGCAGATGGCGCGGATA
CTATCTAAGGAAGAAATACTTACAAATGCGTTCGGCTGCCATTATTATACAGAAATGGGT
GAGGAGATTCCTCGCTCAGAAACTTAGGGAGAGAAGGAAAAGGGCCGCTGAGGTCATAAG
GGCCTTTATTAAAGGTTTCATCACCCGCAACGGTCCAGAAACACCAGAAAACCGTCGTTT
CCTAGCCATCGCTAAGGTCCACTGGCTCAAACGACTCTCCACCCAGCTACCCAGGAAACT
CCTGGACTTGTCCTGGCCACAATGCCCATCCACCTGCCAGGAAGCTTCCAAGGAACTCCA
TCGCCTGCACCGAGCACACCTCGCCAGGAAGTACCGCTTGGCGCTGTCAGCTGATGATAA
AAAGCAATTTGAACTGAAGGTCTTGGCTGAGAAGATGTTTAAAGGTAAAAAGAACAGTTA
TCTAAGCAGCGTCCCTGAGAGGTTCGTCAATGACCGCATGAGTCCTGAACAAAGGGTGCT
CAGGAACACATTCATGGCGTCACCGGCTTGGCCCAATGGCGAAGAACTTATTTATTCATG
CGAGGCAGTAAAATACGATCGTCGCGGCTACAAGGCCCGCGCCCGCTGTTTGCTCGCGTC
CCGCAACGCACTATACGTGTTAGACGCGGCCGGACGCAAGACTTACAAACAGAAACACTG
TCTGCCACTCGACAAGTTGACTGTGGTTGTCACCAATGAGTCTGACTCGCTGTTGTTGGT
GAAGATACCACAGGAGTTCAAGAAGGATAAGGGCGACCTTATTATATCCGTGTCTCACTT
GATCGAAGCGTTGACCATCGTAACGGACTACACCAAGAAGCCGGAACTCATCGATATTGT
CGATACTAGGACCATTGCCCACTCCTTCGTGAACGGTAAACAAGGTGGAACCATCGAGGT
GACCAAGGGAACCCAACCCGTCATACAACGAGCCAAGAGCGGCAACTTACTAGTGGTTGC
GACTCCTTAAGGCCAGTCTTGAGTTATTCCCGACAATATCAGAACAAAGAAACTATATTT
ATATCATTTAATTTTTAATTAGTCATAATAATGTTTAAATGAAGAAATTTATGTACAAAA
GAATTATAATATATTTCATTTTCTAATATTGATTCATATTTTTTTTGATTTATATTGTTT
ACTTACAAATTATTATTTTTCGATTTCTTTTAATTATTAACTTATTTTTGTTATTTTAAG
TTCATTTTTTTAATGTAAGTTTTTTTATTTTTCTACTTTGTGATTTCAATTATCGTTGGT
ACCATTATATATTTTTTAGAACAAAACGTACAAAGTACTTAATTATTGTTTAAAACAGTT
TAAATATATATTTTAATTTAAAAGTAACATGCTGAATCAATGGTGCCTAGAAAGTATAAT
AATGATTCCGTAATATCTTGTTATTTTTTTAATAATTACTACGATTTTTTTAATCACTTC
AACATGTATTAGTGGAAATAAAACATGGAATCAACATTACAATAAGTGAAGCCAATTGAA
ATTATGCCGATACACGACATTCTGGTGTTAGAGACATTACACATGCTTTTAAAATCTTTG
AAACTTCACTCTATTATTGTGCATGGTGTTGTTTCCAGATAATTCTATGTCCACATCGAT
CTAATATTACTAGATACACTATACCGAACAAAATAGTGTCTCCATACAACATAACCTACA
AACATAAAGTGTTTACAAAACTTCAGGCTTCAGTTTAAAACAATTAAAGTGACAGAGAAA
CCATGTTTTGAACTTTAAATGTGTAATTTCTAAAATTTTCTAAAATCACGCGCGTTCTCT
GATCTAATGACATCAAAAGAATACCAATTTTTCATTTTGGTATCGTTTAGTCGGTGTTTT
TGTTATGCTCTAATCGTGTATCTGGTATTATTTGATTTACAAGCGAATTTTATGTTTAGC
ACACAGATTTTCACTTCTATTAAAACAGAATAAAGTGTAAATAATAAATATCTAATATTT
TACTAATAATTTCATTTTATTTGTAGGTCATACTTTGAAGGTCATTTTACCAAAACGCCT
TCGTTTTATGTAATTCGAGGCCATAAGAGACAGGCCATCGTGCCTTATTGTAAGCTAGTT
CCTTTTTAGTCATGTTTTATAAATAAACTTACTTTGAAATTTAAAAAAAAAAAAAAAAAA
AAAAAA
(4506 bp)

- SilkBase 1999-2023 -