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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11427c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X4_[Bombyx_mori]
Ontology
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007275 P multicellular organism development
GO:0007416 P synapse assembly
GO:0008092 F cytoskeletal protein binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030425 C dendrite
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043197 C dendritic spine
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048365 F small GTPase binding
GO:0048813 P dendrite morphogenesis
Transcript
Level		FPKM:14.99 TPM:14.69
ORF EntryO_TrvaFAMAMG14167_complete:A_TrvaFAMAMG_TR11427c0_g2_i2
Sequence
(Nucleotide)
GCGATCGGTGCACTTTAAATTGGCTTCATTCTGTTGTTCATGATTCCAGATGTAATAATT
CTATGCTTATACCATAGTAACTGAAACACTATGGCACCATATTTAACATAAAATTTTGAG
AAGTTATTTTTATCATCTCACAAAAAACTATAATACTTAGATGAAAACTAATAGACAACT
GTTTTTTCCTATCATTGTCTATGATAGAGAATACGCCTCATTTTTTTATGATGATACTTC
AACTATTATAAAATTAATTTTACAAATTTTCTACATTTTCTAGCATCGGTGTTTGTAATA
CCTCTGTCCACCGATGATAAGTGTAATAGCTGTCTGCTCTGAAGAAGTACACGTGGTTCT
TGTAGTGCAACTTGAACACGAAATCCTTGTCTATGCCGTCCTCGGGATCCGGGGGACCCA
CCGAGTATCCTAGTAAAGGTAACGAAGCCAGCGGAGTCTCATCCTGCCAACTCTTGTAGA
AGAACAGAGTGAAGACAGCGAACACCACCCACAGCTTCTGCCAGCCCGGGGACTTCTTGA
ACTTGCGGAGCAGGTAGCCGGACAGCTGGGTCCTCATGGCTAGATGTAGGTGTTCCCTGG
AGAGTGACGTCACGCGATGCCAGCACACGTGGGCGAGACCGTTACCACTCGTCGCGCATC
CGCTGTCCTCGACTTCCATCTCATAAGGTGTGAGTTGTGTGTCGATGTTGTTGTTAACAT
GGAGTGTTGCGTTGTGTATGGCGACGTCGAGCGACCGAGTCCATCCCTCGAATTCGCGCT
CGTTGCTCGCGTTAAACAAGAAACTTAGATCGTTACCGATGAGTGTAAATGCGTTAGTGA
CGTCAGCTCCGCGCATTTGTAGAGTATGTAGCGGTAGTACTGCGTGAACTCGGAACTGAA
CTGAACCGGACTTCGATGCTATTACCAATACATCGTTGAACAAAAACAGCATTCTCTGTA
GTAATCCTCTGTTGGAATGTTTGTAGACGCAGCCCATTCTCAGGAACTCTCTGTCCGGAA
CCAGTAACTTGTCGTAACCTGCGACGTGTCTCTGTAGATGACACAGCGTGGCGTGGTTCT
CTCCGTGCTGCAGCTGTAGCCGAGCCGCCTCAGCCAGAGCACCGGCAGCGTCCAGCGCCG
CGCTAGACCAGCCGCCGTTATTCTGTCTGCATAGCTCGTGCGCTAGGTGACAGTAATGTA
ACAGTCTGTGCAGCGGTCTCAGCAGTAGACACGGCAGTAAGAGCGGCGCGCGCAGCTCCG
TGGCGGCGCACAGGGCGGCGGCCGGCGCGCTGCGACGACGCACGTTCTCCACCAGGCCCG
CCAGGGAACACGCACGCTCTACGTACTCGTGGTATGCATCTGCAGTGCTCGATAAATAAT
CGTAGAGGTATTCCGCTATTTTTCTATATTCAGGCTCTTCGGTTTCGGCGGGCGAGGACG
CCGGGGGCGGCGCGGTGAGAGCTCGCTCGAGGCGGTGCAGGAATGCGCCGGCGGGGAGCG
CCAGGGGCTCCAGTGCGAGACACGCGCGCGCCAACACGCCGGCCGCCTCGCAACCGGCGA
CAGCCAATGATGACACCTCACGACACCATGTAACAGTAACAAACTCCAGATCTCTTTTAT
AAGTCCTCTCTGTCATGAGCAGTTCTTTGGCGACGAAGTACGTGATGTCAGCGTTACGAC
GACGCGGTAACTCGTGAACACTCTCCTTTAACGTCGAGAGAATGTTTGATGATATGCTAT
TATTATTCTTCCTCGTTAAAGTATCACCGGGATCGCTTTCCCCGCAGCTCAGTACGTCCA
TACTATGCGTTGATTCCGATACTATGTGCACATTTACATTTCCATTGATGACGTCATGCT
TGGCGTGCTCATTGTCCAGTTTGGCGTGCACGTCATGCCCATCTTGCACATCATGCCCAC
CTTGCCCATTGTGCCCGCTATGCCCATCATGCGTGTCATGCCCGTTGACAGCACGCACAT
ACGGCGTCGACGTACAAATAGGATTGACTTCGCGCTCGCAAGTCGAACTGGGCGACATGC
AGAGGCTAGCCGACGATACTGTGTTCTCATCGCACAGTGATAACTCGTCTGTGCGCGCTC
CAGCCGCCGCCGACAGCGCCGCCGACCCCGCCGCCGCACTCTGCCGTCTCCAGGTACTCT
CCGGGGAACCCGATGGTGTCGTCATCCGATGAAGCAGAGGCGAATCCTCCATATGATGAT
GATTGACCTCGGCATGAGTCACTAATTCTGGAGCCACTATTTGGCTGCAGTATTGTTTTG
TCAGCTTGTCCCTCGTGGTGGCATAGGCGGTAGCTTGTAGCGGTGGGCGAACGGCGCTCG
GCCGAGACCGAACCCGCTCGGCCGCCGCGCGCGCCTCCTCCGCCGAGTAACCCTTCATCA
TCAGAGAAGCCTCCAGGTAGTGAGGCTGCTTGTCCCACTCCAGGGAAATCGCGTCAGAGC
CGGGCGGCAGCGGCAGCAGCGGGTGCGCGGAGAGGCTGGCGGGCAGGGTGCCGCTGACGG
GTCGCGGCGCGCGGTACGAGCCCGACCTTTGGAATGTCTGTCGTTTCACGTAGTTGTCGC
GAACGAATTCCACTATCTGCTTCTGCGTTTTGCCGCTGTACCTGAACGAGGACCCCCGTG
AGATGACCCTGGTCCTGTGCCGCGGCAGCCTGGGCACGCTGGTGCAGCGGAAGAAACCAT
GGTTCTCGACGCACTTCTTCCAGAAGTTCTTGCACTCGTTGCGACCTTCGAAGAAGAACT
CGACCACGTCTCGATAGAATCCATAACCCTCCGGGTGCAGTTTGATGAGGAACTTTTTCC
TCTTGAACGATATCTTCCTGATCTTGGCCCAGCTGAACGTGTTTATCTTGGTGTAGTTCT
GGAACACCACGATACCCATGTGGGCCACGGCCAGGTTCAGGGGTACACCTTCATGGTCTT
TGGTCGGGTGAATCTTTATACCGTATAATTCACATCTTCGTGCCGTTTCTAGTAAATTTA
AATCCGCCTCCGCTGGACTTTGACCTATGTGTTTCTTGTGGTTCTCCATAATTCTTCGTT
CAGATTCGGAATCCTGGCTCGGGAAGAACTTGTACCCGCTCAGGTACGTGTGATCCGGAT
AATCTTCCGGAACGAAGTCGCCGCATTCCGCTTGCACAATATAACTGGCCATCAGAGCAG
CGGTATTCTCATTGCACTGTATACACCCTTGAGCCAGGTCCCTCTTGACTTGCAAACAGA
AGAGGTACCGTGTGAACTCTTCCTCCAGACGTGCCGGGTCAGGCGTGTAGAACTTCACAC
AGAACCTGAGCGTTGGCTCCAGCATTGATAGACCGAGTTGACGACACATCGGCTTCTCTA
CGTCCAGCCAGTACTTAGTTCCGTTGCTGTCCTGATACTCGAGACCGAAGTAATCAGCCT
CGAGCAGATGTAACTGTCTGCAGACTTGATCGAACAGCACCCGGCCAAGAGCTTTTGACT
GTATCTGGAACATGGATATCGTATCGTCCAGCATCTGCACCCTGACGGCAAGCATCTTGC
CGCCCTTCTTCGGGGTAGCGGGAGGAGTCCTCGAGCCCCCGCCAGCGCCATCCACACCGG
CCGGGGTGCTGGCCGAGTGGTGCATACGGCCCGGCAAGGTGTGATATCCTATCGTGGACA
GATGTCCGGTGGAATTGCAGCTTCCCGGTGGTAACTCTGAGTCCATCATACTGATGTATT
TTTCCTTTCTTCAATATCAGATATTAAATAATCTCTACTCAAGTTCATTCTGTTAGGATT
TTTTTTCAGTCACTGGTCTCTTTTAGTACTTCACGACAACACACAAATATTTCAAACACT
CAAGTTTAACTACCGATTTGTTCATCGCACAGGGAGTCATTGATTTAATTGGTTCCTAAT
TATACACTTGAAAGAAATCACTGGATTTCACTGAACAGTAACTGGTATTTATGAAATAAT
AGTAGACACTACACAGACCGCGCAGTCATTCACGAATAACGTTCACGAACTGTTTTGCTT
GCTTTACAAATTTACACACCCATCACGTCCTT
(4052 bp)

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