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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11424c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006349 P regulation of gene expression by genomic imprinting
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0008150 P biological_process
GO:0016575 P histone deacetylation
GO:0034773 P histone H4-K20 trimethylation
GO:0036124 P histone H3-K9 trimethylation
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0097368 P establishment of Sertoli cell barrier
Transcript
Level		FPKM:9.79 TPM:9.59
ORF EntryO_TrvaFAMAMG14154_complete:A_TrvaFAMAMG_TR11424c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTGTATTTAAGGTAAAATTTATTTAAACTTAATCTACTAAAAATACACAT
CTGAGAAATAAGAATAATACTAACAAAATAAATGTTATTCGAACCGTCAGTCTTTACCGT
GTTGTTAACCATTTATACTGATACCATTAGGTACAGAATTATCTCAATCTCTGCCTTTTT
TAAAACTGTTTAAAATGCATAACTTCAAGCTGAACAGATATTTTTAACAATTTATTTACA
ATACTACTTTGTGTTGATCACAATATTTTGAAGAATAACAATCAATACATCACAGTGGAT
TCGAGGTTAAATAGAGAAGGACAAAATGCTTTTTCTTTGTATTATTATAAATTAAATTCA
AAATCTAAGTTTTTTTTTTCGTAAATAGTGAATTCAAAGTTTTATGAACAATGTCTTTGT
CTCTACTTGATCATGGATATTTTTTGTAAATTAAATTTTAAACAACATTCAATACTTTTT
TCAATCGAGGAATAAAAAACTGATTGCTAACAAAACCATTTTGATATTAAATTTCTACGA
ACATTAAATTCGAAACATCTAACATTTTTATTCTAAAACGAACAAACTTGTCTGTAACAA
CCTTCATGTTCATCTTGGATCTATGAACACGCTGCTTTGGCTGCTTTTACGGCTTCTCGT
TCCTTGCGACGTAATTTTTTACGACGGCGATCAATGGCAGCCAGTTCCGCCTTCACCGAG
TGGTAAGCCTTGCGTAAATCTGTCAGCCGCGTTGTTAGTACGTTTATACGAGTTTGCGAG
TCCCATGATGGATCTAGTTCGACGTAGAAGTTGTACTTGTGCGAGGCGTGGTGGTGCGAG
AGGTCGTCGGTGTCGCGTCGTCGCCTGCGCGCCCCGCGACCCCCCGCCGCACCCGCCCCC
GCGCCCGAGCTCTCCGACGCCTTGCGGGATCGACCGTATGTGCTCACATCGTGCGGCTTT
TCGATATCCATTGAAACATCGTTAGGTCGCACTTCGTCTTCATCGTCTTTACGTTCTGAC
GGACTATCACGTTCTGACATGCGACGATCCCTGTGCGGCGACATGTCGAGGCTGCTGTCG
GGCGTGGTGGGCGGCGTGTTGTCGACGAGCGCGTGCCGGCGTCCCCAGCCCGGCGCGTCA
CCCGCCGCCGGACCAGCCGCCGGGCCGCGAGACGGACCCTCACCGCGACGATCCTCTTTA
GAGAGCGAGTGGTGATGTTGCGGAGCGGACGCGAAGGGCATGTGCAGGCGATGTCGCGCG
GGCTGTGGCTCGGCATCGGGCGCCGGCGACCCGGGGATGGTCTCCTCGCACAACAACAAC
GAGATGTTGCTGTCGTCCTCGCCCGCCGCCCGACCGCTGCCCGCCACTACTACGCTTGCA
CTATGTTTCCTCTCGTTCTTGCACGCGTCCTCGAGCATGAGCAGCGACTCTCCCGCGCTC
CACTCGCCGGCGGACTTGCCCGCGTGCAGGCTCGCCAGCGTGGCGGCGCCGCTCGCTGCA
GACGGCTCGCAACTAGCACCGCCCCACTCCTCCACTTTGTCTATTATTAATCTTTGATCA
GAATCGTCAGAATCACTTGATTCGCTTCTATCTGCTTGCGGGAAAGTCGGAAGCGGTAAG
GGAACGACCGCGGCCGCAGACTGGTTGATCTGGCTTGACAACTTCTGTATAGTGTCGCTA
AGAACTTTATTGTTTTTCTGAGCGGGCACCGTTAGGGGTAAGTCGGCAACACTACGCCGA
CGCTCAAGCACGTTCAATGGACTCTGCAAACGCGGAGATAAAACCTCTTTCCTTATTTCG
TCTTTAGGTCTCACTTTCCTGACATCCGTAGCATCCCGTTTCGCATCAGTCAAGTTGGAC
GGTTCACCGAATATGCATTCGTTAATTTCCGGAGTCCGTACTTTCTTGAGTTCTGGTCTA
ACTATCGGTTTGATTGTGTCAGGCTTTGTTCTTGGTTCTGGTGATTGGGAAGAAACTTTT
ATCTCTGGTTTGTTCAATTTATTGAGATCTGGTTTGGGGTTATCTGTTTTTTCCTCCGCA
GGAGGTGGCGACATTGACAGTCTTTTTGCGCTGTTAATGGCTTTTAGAAGTTTCTCTGCT
ATCTTGGGTCCTTCCGATTGCAATAAGAATCCGGGTGGAGGTTCTGGAATGACATCAATC
CTCGCCGGACTGTCAGGTTCGGATTTGTCTTCTTCGGTATCAATTAGAGGACTAGAAGGA
GGTTCAAATTTGGACGCTATCGGTTCTAGTTCTATTTTTTTTTCCGGTTTTGGAGAGGTT
CTTTCTTTAGGCTCTGTTATGGACTTTGGTATTGTAAGCAATTTAATAGGTGATTCCTTG
ACCGCATCTTGTCTAATAACAGGCGGAGTTATGTTAAAGGTAACATTCGGATGAATATTT
GAGATAGATATGGGCATAGAAATAGGAATCACTTTAGGTACTTCTTTCTTTTGTTGCGGT
GGAGTTTTTGGAGGTTCAGGTATAATTACAGACATTGGTAATTCTTTTTGTGTAACAGCT
TCTTCAATAACATCCTTTGTTTCTTTCTTAGGTTCTATAGCTGGTTCAGGTAGCGTTGGC
ATTTCTATTTCTTTTGTAATGTTTTCTTTGACTGGCTCTTTTATCTGCTCGGGTTCTAGT
AAAGGAGCAACAGGGCTTTTTTCTTTTACAACTACCTCTTCCTTTATGATCATTTCTTGT
TCATCTTCTGATGAATGTTCGTCATCAGCTGGACTCTCGGGGGAATCGTCAATTAATTCT
CTCAATTTGGAAACTTTACTTTTCTTGGAATACGTTTCTTGATTTTTGGCAGGAGTAAAA
CCTTCGAAAGTAGGTCCAGAACTGCCATCACCCTGGAAAGAATCATCGTCCAACCCAAAC
AAACACAACTTAGGGTCTTCCTCTGGACTTTGCCGTCCAACTTCTACGGCTCGGGTTGGT
CCGAAATCTCTGAATGGTGACAGCGAAGGCGACCTTAACGTCGAGGGACGAGGTCTCAAA
TGATCTTCTGATATTTCTTCACTCAATGATTTCGATAACGTTGAAGTATATTTGCTAGGA
GAAATATCATCAAAAATACGATGAGTTCGCTTTTTCTTCTCATCATGCAATTCAAGTTCA
AACGGTTCAGGTTCCTTAAACTCGTAAACGTCTTCAGCTTGTTTATCTGGCTGCGGAGGT
TCTGAAGTAGAAGTCGACAAGGATGACGTCATACTTCCCATCAGCCTGGAACTCTTTTCG
AGTGTGTCTTGTTTCATCGCTGAGTCGTCGTGGTCTTGTTTGACTGAATGCAGCCCTTTT
AGTTCTGATCTAATTTCGTTAAGATCAAAGTCTCGTCCCTGGTGAGCGGTCATGGGCAAA
GGTCGAGGTTTCTTAGCTGGAGACAAGTTGGTCGGTGTGGATACTGTGCGCACCGGCCTT
TTACGAGGTTTACTTGAACTGCTGCTATCGCTCGACTTCGTGTCTTTGGGTCGTGATGAA
ATCTTTGATGGTGGTCCTTTGTCGTCCATTTTCTTTGGTGGTCTCTTTAAATCGACATCA
CTGTCCGAATCACTGTCTGAGTCGGATCTCGCTGATGACTCTTCATTTCTCTTCGCACGA
ACGCGTCGACTCATACCTGTGCCCTTCTTGTTCCTCTGTTCATGTTGTGTAACGTTGAGC
GCGATCCGCTGCGGTTTGATCCACTCGTCGTAGCGCGTGTTCCACCCCGTGTAGTGCACC
CTCAACATTCCCTCCGACGATATTTCTATTACTTTAGCTTCGTAAGTAACCTTAGATTCA
GATTGTGTCGGTCCATAATAGACTTTCAGTTTATCTCCAACTTGAGCCTTCACGTTCGAC
ACACGTGTATGCATCGGCTCATTTGTTGATGGCTCTGTCGTTTTTCTTTTGCGTGGTCTC
TTACTGCTATTGGAAGCGATCGTGTTCCCGCTGCTGGCCGAGTTAGCGCTTTGACTGCGC
CGACTCTGCATTTTCTTAGTTATACCACACCTAGAAGCACGGCCAGAGCTATCACTGTCC
GTGGATACTTGAGGTCGGCGTGAGGCCCTTGAGGTGCTCGAACCTGCGCTTTCACTTTTA
GAGGAGAGTGGTCTTCTCTTAGGTGTTCTCTTGTCGTAGGAGTCAGGTTTAGAAGGCGGC
ATCGATGACCGACCTTTAGACTGTGAACGTGATTTAACGACGATCTCTTTTTTTTCTTTC
TCTTCCGTGACAGAAGTTGATGATGACTTTACACGTTCTTTATCTTTTTCTTTATCCTTT
TCCTTCTCTTTATCTTTTTCTTTCTCCTTTTCCTTCTCTTTATCCTTTTCTTTCTCCTCT
TCTTTTATTTTATCTTTAACTTTCTCTTTCTCCTTGTCTTTTTCTTTCTTATCTTCTTTT
TCTATTTCTTTGTCTTTTTCCTTCTCTTTCTCCTTGTCCTTTTCTTTTTCCTTGTCTTTA
TCCTTCTCCTTATCTTTCTCTTTGTCCTTTTCAATCTTAGGTGTAACAGCTACAACAAGC
GGTTGGTTGTCGGCACTGTCTTCTTCGTCGCTAGCTCGCGGCTTCTCCTTCCCTTTCTCT
GGCTTCTCTTTGTCGTCCTTTTCACTCTTCTCGCTTTTGTCTGTTTCGCTCTTATCAGAA
TCTTTATCTTTGCTGCGCTGGCTAGGAGTGCCGGTGGGCGTGCTAGAGGCGGAAGAGGAA
GTGAGCGGCTGCTTGTCCTTGTCTCGTATGAGAGATCTGCCGGCGGGCGGAGTGCGCGCG
CCACGAGGGTGCGCCACCAGCGTCACTCCGAGCTTACGGTAGAAATCCTCGAAACTATGC
AGGAATTTTTTATATGCTTGTTTGCAGAGGTTTGTAATACTGGTTGTAACTGGATGAAAA
CCCATTTTGTCAGCAATGGTCTTCCATTGATTTTGATTTGTGACTCTGTTGTATCCTCCT
AATTTTTGGACCACCCTGAATAATCTGTACAAGTCAATATCTTTGTTTGCTATAGTTGGA
TTCCTGTTCAGTGGTGTGCCACGATCATCCATGAACTTGTATAGTTGTGCAACAAAATGA
TCTTTTTCTTCCCTTGGTTCATCATCTGAACTGTCGTCAGATGTGTTTCGTGGTTCATTG
AAGAGCGCGTCTCGGTCCCAGTGCGGAGGCAGCACGCCTTGGTTCAAGTACTGTAGTGCT
GCTTCCACACCCGCCCACTCCAACGGTGCGCTGCCTTTACGGAACTCACGAGCCTCCTTC
TTGGGTACTGTGTAATATCGTCCATCTTTGAAGGAGCGCACAAGGTAGTCCTCCTTGACT
TTGATTTGCGCTGTAGGTGCGACCACGAGCGCGGGGAAGGCAGGCTGGTGCGGACGCCGC
CTCTCCGCGCCGCTCGCCGCCTCCACCAGCACCACGCGACCCACGTGCGGTTCGCGCTCT
GCACTGTCCGTTTTCACGGGACGACTGGTCGCTTCACCGTCGCTATCGTCTGACTGAGCG
CGACCTCGTCTGCCACGACGTCCAGCTATGACTGGTGTTGAAAAATGTTCAGGATGTGTT
AAAGGCAACTGATCAAGAGTTTCACTTTCATTGAAATGTCTTCCACTCTTTAAACAGAGT
GCAGATCGCCGCAGAGTTGTGATATCACCGTCATCAAAAACAACAGTATATTGACTGCAA
TCCTGTATTTTAGTGATGACAGCTTCTATTGCATCCTTCTTAGGATCTTGTTTGACTTCA
ACAGTACTTCCAATCCGTAAGGTACCTTTGATGACATCATCATTCACAGTGATGGAACCA
CCGGCTTTTAGTGTTACTTTACATTTGATATTCCTTACAACTTTCTTGACCTTTGCCTCG
CAGAATGCACCCTTGTACTTGGCACTAACATCAGTACCTACTGGTAAATAGGGGGGGTCA
TCACCCTGCATTGTGATAGTTCATACAGGTTGATGTATATCTAGTTAAGGATACACATAT
TATTGTTGTTTTAGTATTTCTTTACGATGAAATATATTTTTTTATTTTTTCCAAGCCGTC
GTAGCATACGCA
(6012 bp)

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