SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11416c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_19145_[Danaus_plexippus]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0001570 P vasculogenesis
GO:0003342 P proepicardium development
GO:0003677 F DNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006402 P mRNA catabolic process
GO:0006417 P regulation of translation
GO:0006915 P apoptotic process
GO:0007507 P heart development
GO:0008283 P cell population proliferation
GO:0017091 F mRNA 3'-UTR AU-rich region binding
GO:0021915 P neural tube development
GO:0033077 P T cell differentiation in thymus
GO:0035264 P multicellular organism growth
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0060710 P chorio-allantoic fusion
GO:0060712 P spongiotrophoblast layer development
Transcript
Level		FPKM:56.51 TPM:55.36
ORF EntryO_TrvaFAMAMG14137_complete:A_TrvaFAMAMG_TR11416c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTTTAACATATTTTTGACTATAATTCAATAAAAATGCAGA
TGGAAATAAGGAAAACTTACAAGAAAAAAAATGTCATAAACAAGCTTTTAACCTTAATTT
TGTCCATAAGAAAATGTAGAATACGTAGTCAATTTTTTTGGAAGATTAACTTAAAAATTG
AAATTAAATTACAAAAAAAATTAAATACTTAAATTATAACTTTAATGATATAGGTACTAA
ACGTTTTAAACTAATGCAGGTTATATTAAATGACTCATGATATAGTACAAAACAAGTTAA
ACGCAGTAGTTAAATGTCCGTTTAAATACAAAAGTAATTAAATAAATCAGGTTTTATGGT
TTATAAAACGTAATGAACTGATAATAAATAATATATGCGAACTTTATGAAATCTTAAAAC
TAATTAGTCACTTAATATTAGGTACAAAATTATTATCATTTAATGGTGTCACCATGCATC
GACTAAAACATGGTGAAAACAGAAACTATGCTCTTAATAACAAAAAAATACCATCTCGGT
CTGCGAACTGACAATAATTAAACACTAAACCAGCTGTTTTAATAAATCGTTTATTTGAAA
CAAAAATCTAGATCAGTTGGAAAATTTACAATCATTGTAGGCGAAAATAAATCTTGGAAA
ATAACAATGTAGTCCAAAGTACAAAGCTGGCTTTTTCAGAATTTCTGCTAATCACCTATT
GGTCCCTTACAATAAAAAATAAACTTTGTTATCATAAATATTATAAAATATCACACTTTA
AATTCAAAGAAAAAAATCTATTCTATATCGAAACTATATTTAGTTCGGTCAAGTACAAAA
ATAATAACTGTGCCAATTTTGAATATATTATTCAAAAAGCAGACAATAAATAAACAATCA
TTCTATCTCGATAAATTAAAAGTTAAATATTCATATTATTACAAAGGCACGATTCGTTTT
GTGTGACGTCGACGGAGTTAGGGCGTGGAAGCTCAAGGAAATTGTCGCCTTCATTCGCAT
CGACCTCACGATAATATGTTACGGCTAAAGTTCGTCAACATTTAACACATGCTATGTGAT
ATATTATTTCTCTTTAATAAATGTTTTGCGGTGCACGAGACCTCCAGAGTTCGGCCGTTT
ATGTTCAAGAAACACGGACAATTTTCGTTTTGCCGATGCAGTTTTGTAATGCTCCGTCGC
CGATGTAAAGGAGTAGCGCTGCGGGCGAAGGCGAAAAAACAATCACCTAAACGCAAAACA
GGTTTGAGATGAGACCGCTTCGCTCAACGAAAGGAAAAAATCGTTCCTTCCAGACAGGTC
GAGAGAGGAGCGGCGACTTTATGCCGAGTTTTGTGTTTCGTAGTTAATTACAGAGAATTT
GTGCAAGACTAAAATTTCATGACAGCTTTGATAATCTTATTCTTTTACAACGGTGCGGAG
CAGTAATCATATTATTATCAGCTTGAATTAGTATATTAAAGGCCGACCTCTAGAGGTAAA
GAACATCAACTGATTCCGTCCGTGGTTGTAGAGGACTGAGATTGTTAGTGTTGTTGAATC
AGAATCAGCCGTATTGTGTATCGCAACGAGCCACGTCCCAGCGACGCGGGCCTCGTCCGT
ATGCGGTGTGGCATCGCAGCTAGCTACAAAATAATTAATAAAGTTAAGAGACTCGAAATA
AATAATAAATTATTATCTTATACACTTAAAAATAGATCACGAGCGCCTTCTCGCGGTACG
GTACCGAGCGCGGACAGGCAGTACGAAATAAATAATGTTCTATATGCTAACTTTACAAAG
ACCACCGCTCGGCGGAGGATCGCATCGGGAAGACTTCCGCGAGCTAATAAATATCTAATA
TTAATAAAGGTGCCATGTACAAGTGCGTGCCGATAACTAAAATTGAACGTAAACTAATCA
CACCGCAAACTTTCGAGACGCCAGTGAACACTTTGTAAATGTTAAAGAATATTACTGGTC
GAAAGTATTAACAAAGACCATCGATACACATCATCAGGAGATCATTCGTTGAGCGGGTGT
GCATATATGCGCGAGGCGCGGCGACCGGGACGTCGCTCGTGCGCGGTCTGGAAGACGTCG
AGGAGGCACTACGGTGTCGGACGATTCTTATGCTATGCTCGGTATAAATTAACTTAGGAC
TAGTTCATCGCACTAAGCGATGACGAGATCGCCAAGGGCCGACGAGAGACGGTTGAAAAC
GGGCAGTCGGTCGTCCTCCGGGTCCGGGGAGTTGGTGCGGCGGAAAGCAAACGCTGTCTG
CGCTGGTGGAGACATCGCCGGCGGTGAGTGCGGCGTCATAGGAGAGTGCGGTGAGCGCGG
AGATCGAGATCCATCGCTCATGTATGACGCAAGCGAACCTCCGGACGACAACGATGCCAA
TGAACCTCCTGGAGATGACGACTCCCTGCGTCTTGCTTCTTCGGCGTTGTGCACGAAGTG
ACAACGTGGCCCATAGGGACAGAAGCCAACTGAATGGAACGTGCGGCACAACTCCGTTTT
ATATTTGGGATGACGCTGTAGATTGCGCAGTTCGCGCATACCGTGAGCGAATTGGCATTT
GTCCCCATATTTGCAAACGCCAGCTTCCTCGAATGGTCTGCAGAGTTCGGTCTTGTAACG
GCTTGTAGCTGGCGGAGGCGGGGCTGGTTCACTGGTGGTGCGTTCAAGGCGGCGACGACC
AAGGCTGTCTAACAGACCGGCCAAAGCACGGTGTGCTGGTACAGAAGAAGCGCGAGACAA
GACTGGATGCTGCTCCCAGCTTAGACCGCTTGATACTCCATTGGCTCCAATTGGTCCTAT
GGTGCCGCCTATATTTCCATTCATCGTCTGTGCTGGTCGAGTTTGGTTCTTCAAGAACAG
ATCACCAAAGTCGTGCAGCGCAGACTGATGCATTATGGCTGTAGACATCATGTAGACAAA
ATGAACTCGACACTTAATCCAGATTTTATTATCTTCTTGATTTGTTAATCTGGGAACTGA
TCCACTGTAGCACGATTTATAAGGTCGACGAACTCACTATGAATTTTACTTTAGCTGATG
AAAAGTTCACGAAGTTTTTGAAGGGTTTTTTTTCCAAAATCCTTTCGATTTATAGTTCAA
TTACTGAGGTCGTTGCGATTTTGTTTCGCGTTCGGTGATCAGTTTGTATCCGAACTAGTT
GGCCAAGAGGCGATTTTCTACCTCTTCCGATTTTAGCCAAAACAGTAATTTTGAACACAA
TTTCGCAAACGCTGCGAAAATGTACAAAACGGTCCTTTGTTTCGAAAAGTTTTTCCAACC
TGATTTATTCGCGTCTATACGGAAACACAAATATTGGTCAAATTTCTGCGCGAACTGCGT
CAAAGTTAACTTTTACAATAGAAACTTTTTTGTAGCTATCGACTTTATAAACCAAAAAGT
TTTTATTCTGGTTGTATAAATCGTATTTTTTATAACAAATCGCAGCGTCAACGTCCGCGC
AAAACGCACCACACGTACATTCCGTATCACGCTTGCTCGCGCACTGAGCTTGTTCAGCTT
GTTTGTGTAGTGTGGCACCTCGCCTTCGTCCGTGACTCGTCGTGCTCCGGCCGGCACGGC
AG
(3602 bp)

- SilkBase 1999-2023 -