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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11410c1_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PRKCA-binding_protein_isoform_X2_[Bombyx_mori]
Ontology
GO:0002092 P positive regulation of receptor internalization
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0021782 P glial cell development
GO:0030054 C cell junction
GO:0034315 P regulation of Arp2/3 complex-mediated actin nucleation
GO:0034316 P negative regulation of Arp2/3 complex-mediated actin nucleation
GO:0036294 P cellular response to decreased oxygen levels
GO:0042149 P cellular response to glucose starvation
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051015 F actin filament binding
GO:0060292 P long-term synaptic depression
GO:0071933 F Arp2/3 complex binding
GO:0097061 P dendritic spine organization
GO:0097062 P dendritic spine maintenance
Transcript
Level		FPKM:3.72 TPM:3.65
ORF EntryO_TrvaFAMAMG14119_complete:A_TrvaFAMAMG_TR11410c1_g2_i1
Sequence
(Nucleotide)
ACAAAGACACGACTACGATCCGATGAAAAGTGGTAAATATTTATTTGTGTAATTATATCT
GTAAATATGATGCAAGAATACGAAGACGACTTTCTATTTGAAGAGGATAAAATCTTATCT
TGTGTTTGAGTTCGCCTGTTATCAATGTGGAAGCAAAACGAATTGTTTTTCGATCCGAGG
ATCTACCCAGTGTTGCATGACACAATGGCGCGACCTGTGCTGGAAGATCGAATGGGTATG
ACTGTCACGTCAGGCAGTGTCGTGCTAAGTAAAGATGAGAAGAACTTGATTGGGATCAGC
ATAGGAGGTGGAGCTCCATTATGCCCTTGCTTATACATTGTACAGATCTTCGACAACACC
CCAGCGTCCAAAGAAGGTACTCTACAAAGCGGAGATGAATTAGTCGGCGTTAATGGACAA
TCAGTTAAGGGAAAAACTAAAGTTGAAGTCGCTAAAATGATACAATCTGCTAAGGACGAA
GTAACAATAAACTACAATAAACTTCACGCCGATCCCAAACAAGGGAAAAGTCTAGATATT
ATCATGAAGAAGATGAAACACAGACTAGTCGAGAACATGTCTTCAGGAGCGGCTGATGCT
TTAGGTCTGTCCAGAGCTATATTGTGCAATGATACTCTTGTCGCTAAGTTGGACGAGTTG
AGAGAAACTGAAAACACTTATAAAAGACTTGTGGAGCATTCTAAAAGAATGCTCAAGTCC
TACTTCGATTTGCTCCAAACTTACAAAGCGGTTGGCGATATATTTTCTGCCATAGGAGTA
AGAGAGCCTCAAGCAAGGGCTTCCGAGGCGTTCTCTAAATTCGGACAATACCATAGATTA
CTAGAACGCGATGGTATCAAAATGTTGAAGACATTAAAACCGATACTTTCAGACATGGGA
ACGTATTTAAACAAAGCTATACCGGACACAAAACTGACCATCAGAAAATACGCTGACACG
AAATTCGAGTATTTGTCATATTGTTTGAAGGTCAAAGAGATGGATGACGAGGAATATGGT
TATAATGCTTTACAAGAACCATTGTATAGAGTCGAAACAGGAAATTATGAATACAGGTTA
ATATTAAGATGTCGTCAAGACGCCAGAACTCGTTTCGCTCGACTCCGTTCCGATGTTTTA
GTTAAACTTGAACTTTTGGAGAATAAGAAGGCTCAAGATGTGGCTTGTCAGCTCAAGAAG
TTCACTCAAGGATTGGCCGTTTATCATAATGAAACTTTGGATCATTTGATGGAAAATAAA
ACATTGTTTCCGGTTGAAGTTGATTTATCGCAGAACGCTTTTCAGTATAAAACGGCCGGA
CCTATAAACCAGGATAACCTCGAAGACGAAGACATTGAATACGCAAAAGAAATTCAAGAG
TACCACGATTTGGAAAACGAAATAAAACCAAAACTTATAAACCGACGACCAAACGAACGA
AACAGTGAAACCGAACAACTTCTACCAATAATTGACAGTGACATTGACAGCTCTGACAAA
AATGACGTTTCAGATAATTTGACACTTTTGACAGAACTAGGACTGGCTGATACGGGCAAT
GATGACTTTGGAAACTTCCAAAATGGACTCTTGGATGATTTTATACCGAAAAGTAGTAGC
GATATTGATGATGTTTTCGATAAATTGTTGAACGATTTGAGTGTTGGTAAATAAATGTTT
TTAAATGTGACTATTTTGTTGTGTTAAATTTAATGCTCAATGCTATCGTCGCCTCAGTGC
TTGTTTGGCCTATCTGCACTCGAGCAAACTTTACAGGAG
(1779 bp)

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