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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11401c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_negative_elongation_factor_A_[Bombyx_mori]
Ontology
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
Transcript
Level		FPKM:4.43 TPM:4.34
ORF EntryO_TrvaFAMAMG14066_5prime_partial:A_TrvaFAMAMG_TR11401c0_g1_i1
Sequence
(Nucleotide)
CGATGTTTTCCTTCACCGTTTTTAGCCAGTGGTGTTGTGAAAAATTGCACGTAAATCTTT
TTTCCACATTTAGATTTAGAGGCCGGCCGGATTTGAACCCTTTATAACCCTAATTTATGC
TCAATTGATAGAAAATACGAGACCCAGAGATTGTCATTTGTAAATTGACCAATTACATAT
TATATTTCTTTGCTTTAGTTTTTTTCATACTGTGTTATTTAATATGGTCATTATTATAAA
AATTATGTTCTAATCACCATAAGAGCCTGCCTTTGGTCATCAAAAAGTTTTTAATATAAC
CGTCTGTATAACAAAAAAAAAATTGTTTAGAATATCCATCAAATCCAGTCTTGCATTAAA
ACAATATTATGCAAGTTATGCAGATATTTTTCACATAATTTTATACTTTAACTTTTTCAA
AGCAATTTTTATTAAAGTCTATTGAGTAACGAAATGATTATCATTCCGCGATTACGATTA
TCATTCGTTATGGAAGACGATTACGATTGTTATAACATTTTAAAATTAGAAGTGTCAATT
GATTTTGACAAAAGAATGCATGAATTTATATAAAAATCGTAATCATCTAACATAACAAAT
GATAATCGTTTGAGCCTATACCGGCATACAAGTCGCGATCACTATCTTGTCACAAATGTA
CACATTTCACTAGCACTGATCACTTTTGTCACTTCATCACTATCACTATAACTAGCTGAT
GGTTTGGTTCGCTATCGAAACCACCGGTTGCTGGTTGCCGGCGGATATAACCGTGGAACC
GGGCGGTATCTTCTGAGGAACCATACCGTCTATAGGTCTGTATTTTTTTGAGTCTGGTCC
ATTGGCCATTGTTGTAGTTCATTTGGAAGTGCATCTCTGAGAGCATCGTGAGATATGTGT
CGTCTGATTGAAGAACATTCTCGATGTTTTCTGATAGCTTTATTGTTACTATGTTTCCTA
AGTTCGGGCAGGGGTTATCTCTCGATCCGGCCATGAAACCGAGTATAAGAGCCTTCTCCG
GCCTCGTCACACGATTGGCGTTTCTGAACATATCCTGAGCTTCCAACATTTGTTCACGCG
TAAGCGACAGTCCTCTCCTCGGCAACAGCGGCGTGGCGGCGGCGGCGGCGGCGGCGGCGG
CGGCGG
(1146 bp)

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