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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11398c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_TFIID_subunit_1_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001129 F obsolete RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005669 C transcription factor TFIID complex
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006461 P protein-containing complex assembly
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007221 P positive regulation of transcription of Notch receptor target
GO:0008134 F transcription factor binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0022008 P neurogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0051123 P RNA polymerase II preinitiation complex assembly
GO:0051726 P regulation of cell cycle
GO:0060261 P positive regulation of transcription initiation from RNA polymerase II promoter
Transcript
Level		FPKM:4.21 TPM:4.12
ORF EntryO_TrvaFAMAMG14056_complete:A_TrvaFAMAMG_TR11398c0_g2_i1
Sequence
(Nucleotide)
GTTTAGTATTAAAATGATTTATTTTCTTAATTCAATAATAATCTTAACAATTCATGTCTT
CTCACCATACATTTGAATTAACATTGACAACAAGACTCCATTATTTCAGCTGTTCTCGCT
CTATCACTATACTCCAAAAAAAAATCATAAATCTTATTTTTTTTTCTATAAATATTTTAA
GCACCAGTTAGAACCATAATCCGTCTTCTGCTTCTTCTTCGCTGTCCGTCACTTGAAGAT
CGTCTTGTATGGCTGGGTCAGGCTGCCAGTTTTCTGGTGGTTCCTCTTTGAATTGTTGCG
GTGGTTCCATGTGAGTTCCTTCCATCATCGGTGGAACCATTTGCATGTCAGGTTCAATAG
GCTCCTCCTTAACAATAGGCGGATAACTGTAATCAGTAGGTTGATCAAGGTCCACGAAAT
CTTCAGAAGGCGGCGGTATGTCGTCCGGTATCTCTCGTTTGATGGTGGCGGCCGGGAACT
CGGGGGGATACGATTTCATCATGTCATCTGATGTACTGGCTTCAGGTTTAACACATAATT
GCATCATTGTATCGCCAATATCTTTCTGTTCAACCTCTTCCAATTCTGAACTACCGCTGT
CTGAGTATTGGAGATCCTCTTCCAAACAATTCTGGTCTTTACGTGGTCTACCACGCTTCC
TGGGAGTTGCTCCGTCAGATGTGGATGGTTTGTGTTTCCTAGGTCGTCCTCGGCCACGTT
TTTCATCAGACGGGGGTAGTTCATCCCCTTCCGGTTCCGAATGTTGCGCGTCTTCGAGCA
TCTTCTGTTGTACACGAACTATGTTGGCCTCTAATTGGCTTACGTGTTCGTCGAACTGTT
CCAAAGCCTCTTGCGTTACTTTGAGTACGGCCTCGGCTTGCCTCGTGAACTGCGAGTTAG
GTCCGTTGTACGCGCGACAGTTGTCCACCAATAATTGAACGTCGCGGAGGAACTCTTCAC
GGCTGTGGTATTTGTGGGCTTGAATTTTCTTTCCCATAGTTTCCATATCGATAGGATGTT
TGATAACGCTGTAGTAATCTTTTACTTGTTTCTTGTTGACGGGCTTCAAGAACGGCCACG
CTTCGGGCATCACCTTCAGTTTCGTTGTTAGAAGATTCTCGAATATGAATGAAAGCGCCA
CCTGGTCATTATCGTCTAGTAACGGATTGATTTGTTTCTCTAGTTTCATTAACTGTTCTT
CTTTTTCTGCTAATTTCTCGACGCATCGTTGCAACATTCTCTGCGCGGCCACTGTCAAAC
TGCTTGTTGGTCCATTATAAAGTGTACTATTCTCGACTATTTGATTAACGTCAGCCAGGA
ATTCTTCACGACTCTGGTAGTGTTTTTGTCTGAGGTTGTCTCGTATTGTTTGTAGGTCCA
TAGGCCGAGACACGATGCGGTAGTAATCTGCCACTAACTTGGGGTTGACGGGGAACAGGA
AGGGCTGTACGTCGGGTAGATGCCTCATGTGTGTGAGCACATCTTCCAGTAGCGAGGACA
GTGTGACCAGCGGGTCGGTGCGGCGTCTCTCGGCCGGCCGTCGCACTAGATACTCGCAGG
GGTCGTCCTTGATGCCGCGTCGTTTGCCGCGACCAAACTCGCTGCCTCGTCTACCTCTGC
GCTTCAAGTCTTCGGCACTTTGCTTAATAATCTTCGTTGGCAAAGTCAGTTTAGTTCCAT
CTACGTATCCCATCTCATCTTCCTCTGGTTCGATGGGCGGTGGTTCTACATCTGTATCCG
GAGGGGACGCCGGCCCCCCGGGTACGGAGCCGGTGTAAAGGGGACAAGCCTTGTTAGTCC
TCATGTGACCGACTTGACCGCAAGCCCCACACTTTAGTTTCAAGTCTGGTTTTAGTTTGG
CTCGCCTTCGGGACGGCGTGTGTGTATCTGGTTCTTGTTTGATCTGACCGAGCGGTATTA
GGGAGCTTGATGATGAACCGAGATCGATGTCGGTTCCAGGAGCGGGTACAGTAACGTTAC
CAGCCAGCCTTTCTCTTTCTTGATTACGTTTAATACGCCTCAATTGTTCCTGAATTCTCC
TCTTTTCTCTCTTCATTTCTTCCTTCTGCGTCTCGTCCATAGACGCGAACTGTCGTATGA
ACATGTCATCTTTGGTTGATCGTATTTTAGTGTAGGCTTCGATGACGGCCGCTTTCCGAA
CTAACTCTACGCGGGTGTAACGCTGACCGGACGCGTCGCGGAACGTACGCACTATACGTA
GTACTCGACCGGCTTGACTGCTCGATGGTTGTTGATCGCTTTGGTTGATTTGTGGTTTCT
TTTCCGACTGACCCATTATCATTTTTCTTAGTTCCGCTCTTTCAGCCTCTTCTCTTTCCA
TTGACAGCTGTTCTGTAGTTTTCTTGTTAGCGAGCATATTCTCGAGATTCTTTCCCATTT
CTTCTAAATCTGATTCCTCACTGACGGAACTCTCAGCCTCGTCAGTACTGAGCACCTCAG
TACTTTGTAATACTCTATTTTGAAGCTCGAATATTCGCTGACATTCTTCTTTGTATCTTT
CTTGATGTTCTGCAATGGAGAATCTATTTCCTCTGGAGAACTTGGTCATACCTTCTTCCC
CAGCTTTGGCCTTTTCCGTTGATAAAGTTCTTACGACGTCAATAACTTCCCATCGAGAGA
GTTTCTTGATCTCTTCCTCAGGAACACCAAATTTCCTCAGCAAAGCCTTAGCATTGTTCA
AACTCAATCTTCTCAAGTCAGCGTCAGTTCCAGTGACAGTTCGCTTCGGTTGTTGTTCCT
CATTTGGTTGTTGTGTTGGCTTGTTTGGCACACGAACGTAGGAGAAACCTTCTCCGCAGC
CGGTGGGGTCGGCTGGGCCAGTCAGTTGGAGCAAACATTTGCCACGCATCGCTTGGATGT
AGGCACGTGTTGTGTTCCATGGTGCCACTTTGACTTCATCATCAATCTTCAACTGCATTT
CTTCATCGTCATCCTCTTGTGGAGTGAACAGGAACTTTTCACCGTAACCTGCATCTTTCA
GCCTTTGTTCCGCGGCCGCCATACTGAAGTATGAACAACACTGCTCCGGTGATACCATGG
CGCGGATTTCTTCTTCGGAGGGTAGACGGAAATCTGGTTTTATTACCCACCAATTTGAAT
CTAATCCGGTACGTTTGAAATCTGCACAAAGTTTCAATCTTTTTCTAATGGAACTTTCTG
AGTGCGACGGGAAAGCCCGCTTTATGTCATCCATTTTGATACGACGAGGTTTATCGCGAG
ATTTCCAGAACAATCGATAAATGAATACCTGTAAGAAATCTCGAACAAAATTATTGGCTC
TCTTAGAATTGGGTCCCGGCACTTCATATAGGGGACACTCTTGTCCGGCCACGTACAGGG
CGTCCACTTCTCGTATGTAATACGCTTGTCTGGTCCTAATGATGAGGAAGTCAGTCTGCG
ACACGGTGTGTTCGTATATGGGAGCGCGGTACATGTTGTTCTCGACGACGGGCTGCGTGG
CTCCGGGCGCCAGGATGCCGAGGAAGGGCGACGTGTGAGCGTACGCCACTTCGCCGTACT
TCAACGGTTTCGGACCGTTGTCCTTAGTAGCAGTCCGTTTGTAGTAATTCTTGATTTTAG
TGCACATTCCAACTTGACTGAGCAACGGTGGATGTTCTTCACAGAACTCAACCAGGATTA
TTTCACCATCTCTACCACTGAGATCTTCTGGTGTTCGCATGAAGAATACATCTCCTCCTC
CCGATGCCAGCCTTTCTGCTTCACGTTGCTTAGCCTTCTTCTTAATATGCTTCAACAAAG
GCTGCACTGGATGTGGTCCCGGGGCAGCCAATGGTCCATAAGTTAATTTCCGTAAAGCCG
GTCTGTGAAAGGCTCGCAATCTCGCCGGACCCATGTGAGTTTGTATGAAGGGTGCTCGTA
ATTCGACGACCGGTGTACTATGTTGTATGAGTTGACCTCCTCCTACTTTGAGCCGCGGGT
TCTGAGATTTGGGCTGGTAGAATACATCATTAGAAATATTGAAAGGATCTCTATCAGGAG
ACTTAGGTGGAGGCGGCGGAGCGTCTTCTTGTAACACGTTGATGACACCAGCCTTGCCGA
GCAAGATCTTTGATTTCTTGACGTGTGGATGTGGTATCTTTACTTTAGGTTGTGGACCTC
GTTCTCTAGTTATCTTCGAAGGATCAACATCATCAGGTATACCCAATATGATGTTTTCAT
CATTCGGGTCCAACGTAAGAATTTTTGGTTTCGGTATTTTCGGCATGCTTTCCGCGTCCC
ATATAACTTCATCCTCCCAAGTACCGTAGACTAACTCTTCGTTTTCAACCGGGAATATAC
TGTACCAAGTATTGTCTTCGCCATCAGCTGAGTTCGCGCCTGCTTGGTTATTGGCTGATG
CGGCTGTTGCGGCAGGCGTCTTAGATTGTATTGTAGTAGGTGGTTGCGGTCGTGGATGCG
AGAACTGTTGAGCTGTACGACTTCCGGATGTAGGTACCCAGCCAGCTGCGTTACTTTTAC
TGTTCAATCGAGCTAGAACCTTATGTTTCATCTCACTCCCGTCCCATATAACATCATCCT
CCCATTGTAGTTGGGACAACATGAGGAAGGAATCATCAGGAAATCCACTATCAGGGCTAT
CTACACTTTCAATATTCTCTGGCAAATCTTCATTGTTTTCTTTTGGTTTTTCTTCTCGTT
CTGCTGCCTTCAATTTAAAACCATAATCAAATCCATCTCCAGTTTCAGGCACATTGAGCA
TGTCATACCAAACTTGTGCTGGTCCAAAACGCCAGTGGGCAGGCGTCGGTCTTTGTGTTT
TATCACCTGAAGCTAATCCTCTGTCTTCATTGGAAGACTGTTGTGTTTCTTCCATTGGTT
TCAATAGTTTTTCTTCATCATCACTAGCATATTGTGCTTCCTGGTTTTCTGTGACCAGTG
GAGGGGTATCACTCCCAGTGCTGCCACTTCGCTTGCGGCGCCTTCGTTTTTTGACGCCAC
GCCATATTTGCGGTAAACTAGACAATTTACCGGGACCAAAGAGACGAGAAAAAAGAAGAA
CTTTTTCAGGTCTAAAATCTGGAAACAGTTCAGTGACATCAACATTGGCATATTTCGACG
GAAGCATAGCAGCAAGTGGAGTTTCTAACTTTTTAGGGCGCTCATGTCTTGGGGGTGGAA
CAGTAGAAGGCGGAGGCATGAGTCCACCATCACCTTCCATATCCCCCTCGTAGCCATCAT
CATTAGTACTTTGTACTTCTTGTTCACCCGCTATATCAGTATCCGATATATTATGAGAAC
CTCCCATGCTATTATCAAACTGTCCTTTTGTTTCTGTGTTATCTGTTCTAATATCTTCTG
CAGCATCTTCAATGTCAAAAAAGTCAACTGCTGACGGACTTTTATTATTGTAATCTTTTT
CTTCATCTTCTCTTATCGGTTCTTCCACGTCCAAGACTTCGGATATCATAGAGCCTAGTC
CTAACCGACTGAGCGATGATAACATTCGCTTAGAATCACCGTCGAGCAGCCCATCGTCTT
CCAGTTGACCCCGTTCATCGATATTACCAAACAGAAACCCGGTCAAATCCAAACCACGGC
TGTGGTCTCCAGGATCGTCACTATCACACATTTTTTAAATGATACGCTTTTGGAAATTAA
TACATACACTTTCTATCTTTCACACTACGGTAAAATAAACAAAACGAAATGTTTTAATTA
ATTTACAAATAATACCAAACACAAATCGCTAGAATTTTG
(5739 bp)

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