SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11397c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_hemicentin-1_[Bombyx_mori]
Ontology
GO:0001933 P negative regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007588 P excretion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0017022 F myosin binding
GO:0030838 P positive regulation of actin filament polymerization
GO:0031253 C cell projection membrane
GO:0043198 C dendritic shaft
GO:0045121 C membrane raft
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.98 TPM:0.96
ORF EntryO_TrvaFAMAMG14045_complete:A_TrvaFAMAMG_TR11397c0_g1_i2
Sequence
(Nucleotide)
GGGGTCGATCACCAACGTTGTGTTCATGCCTTTACGCTATTCGGAACTTTGCCCGCGAAC
GTAACGAACGTTTCGCGCCAAAATCGTGTTCTAATTTGAAACTTTGACATTTTGTGTTTT
ATTTTTAAATTTTGTAATGATTTTTGTGTAGTGTTTTTTTGTAGAGCCTAAAAATATTTT
TTTTAAGTAAAAAGTTTTGTTGTATTAAAATGTGATATTGTTTTTAAAACTGATAAACGC
TGAAAATATTTGTGTTAAATAGTGAATTTTGAATAAAAAAACTGAAAATGGAGCTAAAGT
GGGACAGCCTTTTGCACATTTTGGTGTTTCTCTTCTCTCTGAAAAAAATCGACGCAGTTC
AGCGGTTCGTCGAGATGCCCTCATACACTGAAGTCAACCCTGGTGAAGACGCGCTCCTGA
AATGTCGGATATCAGATAAGAGAGGAGTCTGCTCATGGCAGAAAGATAATAAGCCCGTGG
GCATATACCGCGGTAAATACGAGTGGGCTAACGAGAATAGCCCAGTTGGCGGAGACTGCT
CACTTTGGGTGCGAGCTGCAACTCTACAACTGGATGATGGGCAGTGGCAGTGTCAAGTTA
CAGCCAGCAACTACGATGTTCAGGATGCCCTATCCAGTCCACCAGCTCCATTAGCAGTGC
GCGTCCCTCCTCAATCCCCAAGGATACTATTCAATGGATCACATGTCCTTCCTGGGCAGA
ACATCACAGTACCAGCTGGGTCTAGAGCGACGGTTGTCTGTGAAGCAAGATATGGCAACC
CACCGGCTTATATTGAGTGGTATTTAGAAAAAGAACGCCTAACAGCATGGAGTCAAACCA
ATGCTTCGGAAGTAGAAAGACCTCGTGTTTGGGCTGCCAGGTCTGTGCTTGAGTTGGGGG
CCACTCGCTCAGCTCACGGTCGAACCCTGGCCTGCAGAGCTCATCATCCTTCCTACCCAG
CACCGTACTACCGGGATTCTTATACCATGCTGGATGTTACTTATGCCCCAGTAGTTTCAA
TCAACGGTGCTGATGCTAGCACCCTCGCGAACCTAGAAGAGGGTTCAAGTGCACTGTCCC
TCGAATGTAGGGCGAATGGGAACCCGAGCCCTTACGTATGGTGGACGAGGAACGGGCAGG
TCATACCAGCCAATGGACCTAAACTGATTCTTGCTCCTATTATGAGGAATCATTCTGGTA
TCTACGGATGTCAAGCAAGAAACTCTGCTGGTACATCGGATTCTGTCAAGATCGAAATAG
ATGTGAAATTTGCTCCCAAAGTCACGTGGGTTGGTCCAGATACAGTGGTCGAAGCAAATC
TTTTCTCCCAAGTCACTTTGGAGTGCAAAGCTGAAGGAAACCCACCTCCGTCTTACCAAT
GGTATCACAGTCCTGGTGCAGCAGCCCGCATAAACGATATTTACGAGGAAGGTATCCCCA
TATCTTCAACGCCACAGCTACAGCTACACAACGTGTCGTACGCGCAACATGGCCGCTACA
CGTGTGTCGCGAGTAATCAGATCGGATTACAGGACAGAACCCACCAATCGGAAGCGATCC
GCGTGAACGTGCTAGGTCCGCCAGTAGGCGAGGCGCGCGGCTCGGCACACGCGTGGCGCG
GCGCGGCGGGCAGGCTGCACGCGGCGTTGTGTGCCGACCCGCCGCCGCGACGCGCGTCTT
GGACCTGGGGCAGTCTGCGACTTGACGTGCCGGGGGAGTTGGGTCGCTTCAGTTCCCTCG
AACCTTCAGCCGAGAATGGTTGCTACAGGTATACTCTAGTCATCTCCAACGTTGCGTCTG
ATGATGCCAGGGTCTACGTGTTGCATGTGGAGAATGAACGAGGATTCTCTACTCATGCTG
TGGCTTTGACTGTTCATGAGACAACTCATGTGGCGCCCCTCATAGCGGCCGCGCTGGTCA
TCGCAGCACTCCTCGTTATCGTGCTCTGTCTCATCATCAGGTGCAGGAGGAGACGAGAAA
GCGTCGAGTACAAGACTGATGATTTAGATAGCGAGAAGACAGTCCTCCCAGCAGACGCAG
TGTACACTCCACGCGTCCCCACACACGCGTACAACGGCCCCGCGATCCCCCCAAGCCAGG
CCCCCGGCCCCCAGGGGACAGGGGTCCAGGGGGGGCAGGGGGCCCGGTACTCGCCCGGCG
CGCTGCAGGTTCGACGAGCGGCGGTGGTTCTGCAGCCTCCCACCACCGTGTGATCTGCAC
AGGCAGCTCTATCATCATTGGAAAAAGAAGCCAAAGAAAATGTATACGCGGTACTAGACC
CGCATATACAATATGAAATAACAATAAACAAGCTTGGAGAACCGCCTAAATATTTGTCAT
TGTCGAAGCCTCTAACACACCAAAGAACGCACGCTTTCGACCCAAAAAACATCACTAAAG
AAATTAACAATAACAATGAGAAATTCAGCACTTTCAATCCAGGACCTCCTAAAGCTAGAA
GATCTAATAGAAGCGATAGAAACAACAATTTTAATCCAAATTATGTTTCTGAAACTAACA
ATGATGTAGGATATTCCAAAGATCCGAATTTCGGTTTTGAAAGAAGCAAATCAGTCAACG
ATTTTGAAATATATAATGATACAAGATTGTCAAAGAGACCTCGAGTGTACGAAAGAAATG
GTTCCGGCAGAAAAGCTAATAATGAAAAACAGTTTATGAGAGATTCCACCAGAATTTCCA
ATCGTAGTTGGATATTCGACACTATTGAAGAAAGGAAAGGCAAAGAAGAATTTTTTGATG
AATTAGAAAAAGCTGAAAATAATAATGAAATTTTAAGTGAAGAAGACTGCAAACCCAAGC
CGGGGAAAGTTAAGGAAATTGCTTCAAGATTTAACAAAAGTAGTATGGAAAATAGATCGT
TAAATTTTAAGAAAGAGAGACCAAAACCATTGCAAAGTTACGGATGTCAGGCTTATTTGG
ACCACGTGTTCCCCGATGCAGTGGAAATATGAGTGTTCATGACAAAATGACAAAGATCTC
TGATAGTTTAACTGATATTAAAGTGTATATTATTATGTAATAATCGCCCATTTGCAATAA
TACAATAAAGATCTTGTATTGCAGACGTGTTTATTAAAATTAAATTTATTTGTGAACTGT
TCGGAAAAATTAACGGTAGAATTTGGTATTTTTCTTTAAAAAATTTGTATTTTATTAATT
TAAAAATTTGTGTTGGAACGAAGTTCCTTATCGCGCATTGTGAAAGGGGGCTAGACGGAA
AAAATCTTAC
(3250 bp)

- SilkBase 1999-2023 -