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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11390c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		Robo1a_[Bombyx_mori]
Ontology
GO:0002042 P cell migration involved in sprouting angiogenesis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006935 P chemotaxis
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0007507 P heart development
GO:0008046 F axon guidance receptor activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016199 P axon midline choice point recognition
GO:0021836 P chemorepulsion involved in postnatal olfactory bulb interneuron migration
GO:0030154 P cell differentiation
GO:0030275 F LRR domain binding
GO:0030336 P negative regulation of cell migration
GO:0030424 C axon
GO:0033600 P negative regulation of mammary gland epithelial cell proliferation
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0035385 P Roundabout signaling pathway
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0050772 P positive regulation of axonogenesis
GO:0050925 P negative regulation of negative chemotaxis
GO:0070100 P negative regulation of chemokine-mediated signaling pathway
Transcript
Level		FPKM:2.93 TPM:2.87
ORF EntryO_TrvaFAMAMG14021_complete:A_TrvaFAMAMG_TR11390c0_g1_i2
Sequence
(Nucleotide)
GACGCTGGATGGTTGTGTGACCGACGTTCGTGAGCTCGAGCGCGATGTTTACCGAACTTT
TGAATTTCAAACTGATTCTTGAATACATTTTTTCATGAACATAGAATAGTTGTGGAACAG
ATATGAGAGTGAAATGGTGTAAATTATCGATGTGAAATAAGGTTTTAATATAGTGCAGTA
TGGTGGATGCTGGTGTTAATGAGTGCGATAACACGGTAAATGGAAGGAACCAATTCGTGT
TTCTTGTGCTTGTGCATTTACTTCTTATCGGACTAAATGGGACTAATGCACAAAACAGGG
CGCCTCGCATCAAAGAACATCCGTCGAATACTGTGTCCGGGCGTAGTGAACCGGCAACAT
TGAGATGTGTTGTCGAAGGCAGGCCCAAACCATATGTGCAATGGTTCAAGGATGGACTAC
CCTTACCTCAAGCTGAAGATGGACATAGAGTGTTATTGGAAGACGGATTGTTGTTTTTGA
GGGTCAACCGAGGGAAGAAAGATAGTGATGAAGGCATTTATTCGTGTGTTGCACGCAACA
TTGCGGGCGAAGCTGTCAGCCAGAATGCTTCACTTAATGTGGCCGTTCTACGAGATGAAT
TTCGTACTGAACCTAGAGATGTCCAAGTAGCCGCTGGAGAACCAGCGTTGTTGGAATGTT
CTCCTCCAAGAGGAGTCCCAGATCCTTCAGTGCAATGGCTTAAAGATGGACAACCTTACG
ACGTTGAAGTTAACGGAAGAGTCACAATAACAGATACGGGAAATCTGAAAATTTTAGAAA
CATTACCAACAGATAGTGGCTTATTTCGATGCGTGGCGTCGAACATAGCTGGTGAAAGAC
AATCACGAGCAGCTGCATTAATAGTTTTAAGACGGCCACATTTTGTTGTTAAGCCCAGTA
ATATTACCGCTCTAGTAGGTCAAACCGTCGAATTTAACTGTCAGAGTTACGATTCAAATG
TAAAAATAACTTGGGTCAAGGAAGACGGAACGTTGCCGTCTCATGCAACAATAATTCGTG
GTCTACTAAGGTTAGAACACGTATCTGCGACAGACGGCGGTATTTATTCATGTCGGGCAG
ATAGCCACGCGGGAACCAGTATCACCAGCGCCACGCTCACAGTTTATTCGTTACCGCACT
TCACACAGATACCGTCCAACCTGACCGCATGGGAGGGCGATGTTGTGTCCATTCCATGTG
AAGCCAAAGGGTTACCCACGCCCACCACATTTTGGATATTAGAAGGGAGACAAGATTCGA
TGCTTTTTCCAGAATGTACTAGAAGTAATACGAGTTTACTATATTTGGAAAGCGCGCAGG
CGGAGCAAAGTGGCAGAGTAATTTGTACGGCTGTTAACGCAGCTGGAAGTATCATGCAAG
AAGCGTATCTCACTGTTCTTCGGAAAGGAAACAGCGAATTAAGGGACCATTCCAATCGTG
GTTTTGATGATGATTTAGATCGTAGAGCGCATATGACAGATTACGAACTTCTCCAAGCTA
GGAAGTATCTCCAACAAAATGTATTGGTTATGAAACGAATTGAAATGTTATCATCAACTA
GTGTCAAAGTGGTTTGGGATGTGCTAACAGACTACAATGAATACTTAGAGGGTGTTAAGA
TCTGGTACAACGGAACAACATTGAATTGGCGAAACATTACGATGGAAGACTTAATTGCTC
AATCAGACTTGAGTCAATGTTCAAATGGATCTTTAACGAATGTTGACAATAGTGGATCAT
CAAGTTATATTCTCTCAGGGCTGACTCCTTATACTCAATACGATATATTCCTTATGCCGT
TTTATAAGACGCTTCTTGGGAAACCTTCTAACATGATATCAGGATATACAGATGAAGGCA
TACCATCGGCGCCACCCCAGACCGTAACAGCGGGGGTGATAAATGCAACGTCTGCCTGGA
TACGGTGGGAGCCACCACCTGTGAATACGTGGAACGGAGAACTAACAGGATATTTGATAG
AAATCCGTGTAAGTGGAAGCACGGGTGGTCGTGTGGTAGGTCAGATGTCCCTAAACGCTC
GCACCCGTGCTGCTGCAGCCAGTTCCTTAAGGGCTGGAGGACGGTACACCGCTCGAGCCG
CAGCCGTGACAAGACGAGGCCACGGACCCTTTAGTGCACCGGCGCTAATACACATGCTCC
CTACTCAGTCGCAAAGGCATTATGTGCAGACTGAACCACCTAAAGACACAAATATACCGC
ACATATTACAAGAAACTTGGCTCTTAGCGTTGGGTCTCACCCTTTTCTCAGTGATTGTAA
TTGGAGCAGTCAGCATTTACTACATAAAACGTCGGAACAGCATACAAAGAAAGAAATCCG
CTGGTCAATCAATTGTCACGGCACAACAATGTCTCCTAAATAAAGAGACGGTCTGGCTTC
GCGACAGGCCCGTATTCGGACCAAATAACGACGCAAACATGGACGTGAACTGTCATCAGA
GTCTTTTACATGGAGGACAAACAACTAGTATTCTGAATGTCGAGCCAGAGTACAGTCTCC
CACAGAACTCAATTCAAGGATTAGACGCCTCAAGTGTCGATCGCATCAGGCGCGGACCAC
CGGAACCGTACGCCTCGAGCGCCATTTACACAGAACTCAACTTCAAGGATAACAACGATA
TTGGAGACTTGAGAGGATGCCCGGAAAGGAGGTCTCACAATAACAGTATTGTAAGATCAT
GCAACGGAAGCATTCAGTATTCAAATGGTGAATGCTCGACTTGCTGTCACAGCACTTCGA
GCAGATCAACAAAAGACTACAGAGAACCAAGACATGACAATGTACATAATGAAATTAATG
TTATGGAAGATGATTGCGGGTCTTGCCACACAAACAGGTCCGGATCTAGAAGCAGACAGG
ACAAAAGCAAAGTGTGTCCGGCGACTGATTTAGATTACGATTATCCTCAGTGGCACTGGT
TAGGACGGGAGAACAGTTTCAAAATTCCCATCCAGACGAGTCGACATTCGAACACAGCGA
GGTCGGACCAGGGCTGTCAAATAAATCTATGTGATATACTGCCGCCGCCGCCGTACGAGA
GTCCAGAGAACAAACACAACTATGGAACGGAAAAAACTTAGGAATGAAAAACAAGAAAAA
ACGAAAAGCAATAATCTATACTTATCTTTTTTGAATCTTTAAAATAAGTAACTAGTTAGA
CAGAGTAGGAAATTGTAGTAGAAAATCATTGTAGCGTGTTACTGGAGTAATCGGAAACAT
ATTAGATGTTATTAATGTTAGTAATCTTTAGAGACAGTGTTTTTTGATATTGTAATTTTA
TTCCTAATCTATATTCTAGTCACACTGTATAGGGCTAGTTTTAAAGTCTGTATTTAAGAT
TTTCCTATAAATAGTATTTTCCCGTTCTTTGTTTTAGCTAAGCGATAGCTGAAGGTTGTT
TAGACTGGACTATTAGTATAAAGTGCTCTGCATCTCACTGCCATATTGTACTTTTAGAAT
TAGGTTTGTTAGTTGTAGATATAATCTTCGACTGTGATATTTATGTATTTAAAAATTGTG
CATCGGAAATAAATTTAATTTAATTATAATCGATCTCCCAACATACTGTATTATCACATG
TTTTAAAATCACTGTAAACACTTCCTTATACCTAACCACAATATTTTCAGAACCAATTGT
GTTTATATCCGATATAAAAAACGAAATAAAGCGACTTTATAAAAATTTTAAAACAAA
(3717 bp)

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