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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11375c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Transcript
Level		FPKM:7.45 TPM:7.30
ORF EntryO_TrvaFAMAMG13978_complete:A_TrvaFAMAMG_TR11375c0_g1_i1
Sequence
(Nucleotide)
GCGTGCCTCTCACTCGCTCTCATTGTGAGCGCATAACGTGAGCGGAGCGTTGCGCAGTTT
CTTGAAGTATCACCAATTTATAAGACCTTGTCACGTCAAAACAACGAATGAAAACATGGG
AAGATCTCCAAAGGCTTCTAAAAGGACCCGAAGTTCTTCTCCAGATTACAGACGAAATCG
ACCAAAGAAAGATGATAAAACTTCCAGCACTGAATTTAGTTTTCTTGACTACAAAAGAGA
TATAGAAAGAGTTTTATTATACAGTAACGAAAGTAATACAGTTGTGAATAATTTAAGTGA
TTTTTGGATATTTTTAAAGAAATATGAAGTCACCTTAAGAAAGGCGGGGAAACCTCTAAT
TGACTTTGATGTTGATACCAAAAATGCTGAAAGTCAAAAATTTTCCAAATTTAACTGTAT
CAATTTCACGTCATCTACAAAATTCATAGATACAGTTTGTGATGAGGGAAACCACAAGAA
ATTAAGCAGAAAAATTTATGATGGTTTCCTGAACATAGTGTCTATTTATTTAGATTTTAA
GAATAAAGAGAAGTTTGAAAAACTGAGGAAGTTAAGGCAAACTCAGAAAGAGTTACCTGT
TGCGAGCTTTAGGAATGATATTGTAACAGCTGTTCAAAATGAAAAGGTAGTGATTGTAGC
TGGTGATACTGGATGTGGCAAATCTACTCAGGTTCCTCAGTATTTACATGAAGCTGGCTT
TCAAAACATTGCTTGTACTCAACCAAGAAGAATAGCTTGTGTTTCTCTTTCAAAAAGAGT
GGCTTACGAAATGTTGACTCAGTTTGAAAGTAAAGTTGGTTATCAAATACGTTTTGAGAA
GAGCAAGACTGTAGATACGAAAATCTGTTTTATCACTGAAGGCTTATTGTTGAGGCAGGT
CAGATGTCTTCTGAGAATTTACCAAGCTATGACGTCATAATTTTGGACGAAATACACGAA
AGACATTTAATGGGTGACTTTTTATTAGGTATTCTGAAATGCTTGGTACACACAAGAACT
GACATAAAACTAGTGTTGATGTCTGCTACGATAAATATTAAATTATTTGAAGAGTATTTT
GCTAGTGAATCTGCAGTTGTGATAGAGGTACCTGGCCGGTTATATCCCATAGACCTGAAT
TACAAGCCAATATTTATAGAAGAAAAACCAACAAGAGATGATAGATTAGATCCACAGCCC
TACGTTCAAATTATGCAGCTGATTGATAATAAATATCCTAGTGATGAACGAGGCGATCTC
TTAATATTCATGTCTGGAGTACAAGAAATTACAGCCATATGTGATGCTGCTCAACAATAT
GTAGAGAAAACTAAGAATTGGATAGTTCTACCGTTGCACAGTGGTTTGTCATTGGCTGAA
CAGGATAAGGTATTCGATTATCCACCAGAGGGCGTTAGAAAATGCATAATATCTACAAAT
ATAGCTGAAACATCAGTTACTATTGATGGCATTCGATTTGTCGTCGACTCAGGGAAGGTA
AAAGAAATGAGTTACGATTCGACGTCCAAAATGCAAAGATTGAAAGAGTTTTGGATATCT
AAAGCGAGCGCTGATCAAAGGAAAGGTCGTGCTGGAAGAACAGGCCCCGGTGTCTGCTAC
CGAATATATTCGGAGCAACAATACACGGATATGGAACCGTTCAGTACACCGGAAGTGTCG
CGGGTGCCTCTCGCTTCTCTATTGTTGTTGATGAGTTCTTTAGGAGTTAGTGACGTCAGA
CGATTTCCGTTCATAGACAAACCGCCGGAAGAGAGTATCGAAAATGCTCTGTTGGAACTT
AAACAGCATGGAGCTTTATCCTCAAATGAAAAGCTAACTGCCCTAGGTAAAGCTCTATCA
AACTTACCGGTTGAAGTTTCGTTAGCCAAAGCTCTCGTCATAGGAAGTGCGACACTACCT
ACACACAAAAAGGATTCTGCTTTAGCGCTGACAGCAGCTTTGGGCATAAGATCTATATTT
ACTACGAGAGCTCATAGAGATTTCGACTGTGAGAACGCTAGGAAACCAGACGAATCGGAC
CACGGTGATCCCTTAACACTACTATCATTGTACTGCGCTTGGTTGAGGGTCAAAGCAGAA
GATCGTGGTGGTAGAACATGGTGCAAGAAACGTGGTATTGAGGAACAAAGGCTTTACGAG
TTGACTAAATTGGCTGCACAACTGAGAGGCCTTTTGCAGGATAATAATTTAGCTGAAACC
CCGGAACCAGAGACAATGTCTTCAGCCGAGAGAGCATTACGTCACGGTCAGATGAAACAA
CTTAAAAATATGAGAAGACAATACAAACAAAAATCGGCCGAAGAATCGAAACGCAAGAAA
CGTCTTAAAATCGATTCTTGGGAGATTGTCGATGATAATCAAAACGATGACAACGTTTTG
GACATACGAGATATCGAGTTCCGAATGAGTAACGACGCTCAGAGAATACAGGCTCTTATA
TCTGGGTCTAGCGCGTCTAGTGGACGAGATTTAATTATGTTGAAGATAGTGCTATGTCGA
GCATTATACCCGCAAATAGCAGTTGCAGATGAATTCAATTATTGTAAGTCAGTAGCAGAA
CAACTATATCACACATGGAGTAAGCCATTTGTATTCCTACATCCGACCTCGTATTTTGGT
AAGCAACCCCGCGTGCTGATGCTTACCGAAGCCGACATACAAACAGACACGCCCGTGGGG
TATAAAAGTAGGCTACCTTTGTCGGCTAGACATCAGTTGCTGTGTTATTTATCTCTCCTT
GAAACAACTAAACCATACATAGTTAATTCAATGAGGATGCCGGCTGCACAAACTTTGTTA
TTACTAGCTCATTCTATAGACACCAATATTGGATTTACAAGGATTGTATGCGATTCATGG
TTGTTACTAGAATTTCCTTACCCAGAAACTGGTTTGAATTTACTGATGAAAGCTGTAAAA
ATAAGACAAAGATGGGACGCGCTTATAAATCGACGTCTTGCAGATGCAAACCCAACTAAA
AGTGTGGAATCAGAATTAGAGAAACAGAAACACGCTAAATTATCGTACGAAGAGATCCAA
CACGAATTATCGTGCGATATCAGTTCGTTTATGAACAGTGAAGTTTATTACACTATCAAG
AGATTGTTGCCCGGTGATTTAAAAGTATTGTACTACGGAAATGATGAAGCCCACCCTAGT
ATTGATCCCAATCCTTTTGAAGAAGGCTTTGAGTGTCGTCCTCATGAGAAAAAGGGAGGC
GTTTACGTCACAGACAATATTGTTTACAATTGTGTCGTAGATACAGATTGGAGTTACAAT
AGCTATCAAGAAACATACAGTTTGCCTTGGACATGCGAAAAATGTGAAATAACAATATGT
TTCTCACCATTAGAAAGATTACAGCACAAACAATTCACTTGTTCGGCGAAAACGGTGAAG
GAAGAACCAGGTCCAAGTAAAATTGTAAAGGAAAATAAACCTAATTGCAAAGAGTTTAAG
TGTGATAATTGTGATACGGTTCTGTATTTAACTCCTGTCGAGATATTGAAGCATAAGAAA
AGTTGTAAAAAGAAATAAAATATATTTTGTTTTTAAAAAAA
(3581 bp)

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