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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11372c3_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106143320_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009986 C cell surface
GO:0016363 C nuclear matrix
GO:0030529 C ribonucleoprotein complex
GO:0048306 F calcium-dependent protein binding
GO:0071222 P cellular response to lipopolysaccharide
GO:1900182 P positive regulation of protein localization to nucleus
GO:1904591 P positive regulation of protein import
GO:1990405 F protein antigen binding
GO:1990831 P cellular response to carcinoembryonic antigen
Transcript
Level		FPKM:6.67 TPM:6.54
ORF EntryO_TrvaFAMAMG13965_complete:A_TrvaFAMAMG_TR11372c3_g1_i4
Sequence
(Nucleotide)
AATATCGAGACAACTCAATTAATTAAATATCGTGGTAAGAACCCGTTAGAAAATGCATGA
AAGTATGATATCTGTGTATGTTTGTATCTCTTTCTCTTTGTGAGTGTGTATTTAGACCTT
TCCGTGTGTAATATATCTGTGTGTAATGTTCATAATTTTAATAATTTCATTTTCAACTAA
TATATAAAAGGATGCTGACACAGCGTTCTGCGTCTCGTACATTAAAAAAGCTGACAATAG
CTCGACCGTTACCTAAAATATCGACAAACTTCACCTCGCCCACTTCACGCATTTTATTAT
TGAGCGCTTGCAGATTCACGCTCGGTGGGAGCGAACTGAATGCGACTAAGGTGCTTGGCG
GTTTAACGGTCTCCGGTTCATACGAATTTACTGATTTTTGTTGCATCTGATTGTTACCTC
TATTATCTGCATTATCATTATAACTTTTCCTGTTATCATCTGAACTTTGTCTATTGTAAT
GAGCTCCAACGTTCCCAGTATTTTGGTTCACAGAATTCTGCATCATATTCCATTGATAAT
TACTTTGATCCCATCTCGACATCTGATTCTCTGTACTCATTCCAAACTCAGCATTCTGAA
TCCCAGTGTTTTGCAATAAATTCTGTATAGCTGGGTTCATTAGGTTTTGCATAGGTTTGA
CTTGGGGCACACCCAACATATTCTGGTTGGGTATGGGTTGAACTATAACCGGGGTGATCA
CTGGAGCGATTTGAGATTGGTTTGGGTTATCACCCGTCTGTCTCTGTAACTCTGTTTTGA
TTTTGTTTATCGTTTCTTTTAGTTGTCGAGCTTCTAGGTGTACTCTTATACCTCTGAGAG
GTTCTCCGTTAAGTCCTAATCCTGGACCGAAGCTACTCAGTCCGTTTGGAAGACTACTGG
GTGTGTTATCCATTTGCACGATCATGTGTTTGCTGTACAGCTCTTGATTATTTAGCATAG
CTATTGCCTGCACAGCTTCTACAGGATGATCGTATTCAATTTTGCCCATAATTTTCTTTC
CATCTCGACTCATAATCAAGTTACAGCTCACAATCAGTCCGCAGAATCCGAATACTTCTC
GTAGTTTCGCTTCGGTAACTAGAGAATCTAAATTATTAATGAAGATTTTGTTGCTCAAGG
GTAGTTTTACGTGCAATGAATCCAAATACTGTAAGCTAAGTCCGTATGTTTCGTGATTCT
CCTGTCTTATGTCATTATTTTGATCAGAGTTCATTTGTTGATGGGTTTCGTTTTCGCGCA
TTTTGGAATAGTTCTGAGGCTCTTGATTGTGTTTTGGGGAACTTTGAGCCATCGCTTTCA
AGACTTTCTGATTCAACTTTCCTTGATTCCTAAGCTTGTTGAACTTGTTATCTGAAAAAC
ATTAATTTAAAAGATTATTAAACGTTTTATCAAATGTTTATTTCCTTTGTTCCTTTCCAA
TCTGCATTGTCCATAAATTTATCATACTTACTTAACAAATCAAAAAAAACCTTCACTGCA
ATAATATTTGTTAAGACAAAACCTTTTTTTTTTTTTTTTTTTTTTTTCATCTGCACTATT
TTATTTGTAAGTAAAACTTATGATAATCAACGTCGACCATGCTACGTCTGTAACAACGTA
AATCCAAGTACCTACCGTATCTTCGCTCGTTCACGGGAAAACTGTAATGAAATATAATTC
AAGTTAGTTCAAATATTTACCAAATGATATCCAGCTTCGTGAGTACGCCGGCTGCAGTCT
CCATAGCATAGCTAGAAGGCAGTAACCAGTGCAGTGTTGCACTTAATCTAAAATTGCTTA
AGACTGAACAGTCAGTAGCACTTGTTTGAGGTCCCCTTAAGACGACAGCTTAAGCTAGTT
CGTCTCAACTTTAACCTCTTAGTTGGAGATCAAAGACATCCTTCAAAGGGCTCTAAAATC
ACAACTCTTGTTTGTTCCTGGTGTATATTTCATGCCAAAAATTGTATTTTAATTCAGCGT
TATGATTAGTTTGTAAAAACCTAGTATTCCTCCCCACAAATAACGGCTGATGAGATGTGT
TTGACAATTTTCAGTAAATAAAACTGCGCGATCTTCCACTTATTTGTTCTTCCAAGTGGA
ATATTTGCTACATGTGAAGCATACCGGATGAATAATCTTTCAAGAAACCTAAAAACCACT
ATTCATCGGATTTTGGTCCTCAACGTTGGAAAAACAAAATAAAAACGCCGTACGATCCAA
GAAGATCCACCATTTCAGAATTGATTCACGTCAGAATTATTTTTTGCGACCGAAAACTTG
CCTATTATTTTTTTTACCTACTTTTGCAGATTTGACATGCAGATTTTTCACGGAACTTTC
GCCACCTAAAACTGTTGCGTTTAATACATAAACAGCCATGACGACGAAAAAAACTAAATA
AAGAAAAAACTCCTTCCAAGTCGGGTTCAAATATCGAAAAAAACAGCTACTCAAAAAAGG
TAAACTGAGCAGAAAATATAACCCATCCGGTTACAAAAATGGCAAAACAATTCAGATCAG
TTCGATGAATAGATGAAATTCCTAAGTTGTAACGTTCTTCGAAAAAAATCTGTGTAGATT
ACTGTAGAAATGCTCGATGGACTATAGTAACTATAGTTAAAAAAAACAATTGCAGAGAGT
GTTAGAATTAGTATTAACACGATGAGAACGAAGTGACGACGAATTGAACTTAGAAACCAT
CAACTCACATAGGCTGGAGTTCAGCTAGGGCGATCAAATTAACTGTTCGAATTTCGCGTT
TGTAGGATACTACTAGGATACACTTTCGAATGTGGATTGTTTGATTTTGTGAAGATGTAT
GTAAAGATAGACAGGAGTGGAGAGAGAAGACATATTTCGTCGACCCCATCTAGATGGGAT
AAGGTAAAGCGAAAGAAGAAAGACATTTTTGGATGTGGACACAGCAAGTGAAATTAATTT
AAAGCAAAGACAAACAAGCTTCTAAGATCTTGAATACAGTCTGGTAGTAGCTGGTGTAGT
GCCATGACAAATAAAACGAGTTTAAACAAGAGTCTATCTTGTTTAGTGCAGAAGTTCATT
TGCGATTCCATTATCAGATCAACTCCATGGTATCATATTATTAATAAATATTTCAGCTGA
ATCAGGAAGTTTGACAAAACCAAGACGAAACTCTCAAGATTCCAGACGAACTTACATAGG
TACTCATACTCGTACATCCGATGTAAATAAAATAAGCTTTCAAAATTAGCAAAGTCCAAG
TCAGCGTGTCGTGAATAGTGCATTCAATATTAAAACTCGATTAACAAGACGAAGGACTCC
ATAGATTTATAAATCTTAAAAGTGACAGCACGAACAATTTAGGATTTTGGGGAGACCCAC
AGCTCCCAATAAACCTGAGAATTGATATTTGACTGAACTTGGTGATCGCTAACGCTGAGA
TTACCAACTCTATTCTAACCCCAGAATATTTTTATCCAAATCACAACAATTTAAAACTCT
AAGCAAAAAGACAAAGGAGTTCCAGACCAAGTAATCAAAATACGTCTTCCATTTCAACCA
TATTAGGATCAAGTTCCTTATTTTTTCTGCGACACATTTCTTTCCATTGCACGATTTCTT
CCTCAGTGTCTTTGAAGCATATTCTCATCAGAAGTATTTTACTTCGATCATCTGTCCGTC
AACCTTAGAGCCATCGAAAAATTTGACACAGCGTTCTGCGTCTCGTACATTAAAAAAGCT
GACAATAGCTCGACCGTTACCTAAAATATCGACAAACTTCACCTCGCCCACTTCACGCAT
TTTATTATTGAGCGCTTGCAGATTCACGCTCGGTGGGAGCGAACTGAATGCGACTAAGGT
GCTTGGCGGTTTAACGGTCTCCGGTTCATACGAATTTACTGATTTTTGTTGCATCTGATT
GTTACCTCTATTATCTGCATTATCATTATAACTTTTCCTGTTATCATCTGAACTTTGTCT
ATTGTAATGAGCTCCAACGTTCCCAGTATTTTGGTTCACAGAATTCTGCATCATATTCCA
TTGATAATTACTTTGATCCCATCTCGACATCTGATTCTCTGTACTCATTCCAAACTCAGC
ATTCTGAATCCCAGTGTTTTGCAATAAATTCTGTATAGCTGGGTTCATTAGGTTTTGCAT
AGGTTTGACTTGGGGCACACCCAACATATTCTGGTTGGGTATGGGTTGAACTATAACCGG
GGTGATCACTGGAGCGATTTGAGATTGGTTTGGGTTATCACCCGTCTGTCTCTGTAACTC
TGTTTTGATTTTGTTTATCGTTTCTTTTAGTTGTCGAGCTTCTAGGTGTACTCTTATACC
TCTGAGAGGTTCTCCGTTAAGTCCTAATCCTGGACCGAAGCTACTCAGTCCGTTTGGAAG
ACTACTGGGTGTGTTATCCATTTGCACGATCATGTGTTTGCTGTACAGCTCTTGATTATT
TAGCATAGCTATTGCCTGCACAGCTTCTACAGGATGATCGTATTCAATTTTGCCCATAAT
TTTCTTTCCATCTCGACTCATAATCAAGTTACAGCTCACAATCAGTCCGCAGAATCCGAA
TACTTCTCGTAGTTTCGCTTCGGTAACTAGAGAATCTAAATTATTAATGAAGATTTTGTT
GCTCAAGGGTAGTTTTACGTGCAATGAATCCAAATACTGTAAGCTAAGTCCGTATGTTTC
GTGATTCTCCTGTCTTATGTCATTATTTTGATCAGAGTTCATTTGTTGATGGGTTTCGTT
TTCGCGCATTTTGGAATAGTTCTGAGGCTCTTGATTGTGTTTTGGGGAACTTTGAGCCAT
CGCTTTCAAGACTTTCTGATTCAACTTTCCTTGATTCCTAAGCTTGTTGAACTTGTTATC
AAGATCCAATGTAACGGACACCCTCTTTCTTTCAATTTCCATATGTTTAAGTTCTGCTAG
TGCTATGTTACAAAAATACGAATTTGAGAACTTTATTAAGGCAACGTAAGTTCCATCATC
CTCTGCGTATGTGTATGCAAATTTTATATTATCTTCGATGGTCTTTGATTTAGACGCATC
CCGGATGATTCTTTTAATTTTATCAGGGTGCCATAATTGAGGTACGGGTCTTATGCATAG
TACTCTACAAGCGCCGTATTCCGTATCATTTCGACGTCGAGAATCGTGACATTGATTCGA
ACGCATCGGAGAACGGGACCTACTTCTTCTATGCATGATGTGTTTGCAATTTTTTTAATG
CACAAAAAAATAATGTATTGCAAACAGTATTTAGTTGAATAATTGAAGTATTTAACATAA
GTTGAGACTTGTAAATCACCAAGACATAGCTACTAAAACTTAAAACATTATTTTGTTGTA
ATTTAATTTTCAGG
(5354 bp)

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