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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11372c3_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106143320_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0009986 C cell surface
GO:0016363 C nuclear matrix
GO:0030529 C ribonucleoprotein complex
GO:0048306 F calcium-dependent protein binding
GO:0071222 P cellular response to lipopolysaccharide
GO:1900182 P positive regulation of protein localization to nucleus
GO:1904591 P positive regulation of protein import
GO:1990405 F protein antigen binding
GO:1990831 P cellular response to carcinoembryonic antigen
Transcript
Level		FPKM:1.39 TPM:1.36
ORF EntryO_TrvaFAMAMG13964_complete:A_TrvaFAMAMG_TR11372c3_g1_i3
Sequence
(Nucleotide)
AATATCGAGACAACTCAATTAATTAAATATCGTGGTAAGAACCCGTTAGAAAATGCATGA
AAGTATGATATCTGTGTATGTTTGTATCTCTTTCTCTTTGTGAGTGTGTATTTAGACCTT
TCCGTGTGTAATATATCTGTGTGTAATGTTCATAATTTTAATAATTTCATTTTCAACTAA
TATATAAAAGGATGCTGACACAGCGTTCTGCGTCTCGTACATTAAAAAAGCTGACAATAG
CTCGACCGTTACCTAAAATATCGACAAACTTCACCTCGCCCACTTCACGCATTTTATTAT
TGAGCGCTTGCAGATTCACGCTCGGTGGGAGCGAACTGAATGCGACTAAGGTGCTTGGCG
GTTTAACGGTCTCCGGTTCATACGAATTTACTGATTTTTGTTGCATCTGATTGTTACCTC
TATTATCTGCATTATCATTATAACTTTTCCTGTTATCATCTGAACTTTGTCTATTGTAAT
GAGCTCCAACGTTCCCAGTATTTTGGTTCACAGAATTCTGCATCATATTCCATTGATAAT
TACTTTGATCCCATCTCGACATCTGATTCTCTGTACTCATTCCAAACTCAGCATTCTGAA
TCCCAGTGTTTTGCAATAAATTCTGTATAGCTGGGTTCATTAGGTTTTGCATAGGTTTGA
CTTGGGGCACACCCAACATATTCTGGTTGGGTATGGGTTGAACTATAACCGGGGTGATCA
CTGGAGCGATTTGAGATTGGTTTGGGTTATCACCCGTCTGTCTCTGTAACTCTGTTTTGA
TTTTGTTTATCGTTTCTTTTAGTTGTCGAGCTTCTAGGTGTACTCTTATACCTCTGAGAG
GTTCTCCGTTAAGTCCTAATCCTGGACCGAAGCTACTCAGTCCGTTTGGAAGACTACTGG
GTGTGTTATCCATTTGCACGATCATGTGTTTGCTGTACAGCTCTTGATTATTTAGCATAG
CTATTGCCTGCACAGCTTCTACAGGATGATCGTATTCAATTTTGCCCATAATTTTCTTTC
CATCTCGACTCATAATCAAGTTACAGCTCACAATCAGTCCGCAGAATCCGAATACTTCTC
GTAGTTTCGCTTCGGTAACTAGAGAATCTAAATTATTAATGAAGATTTTGTTGCTCAAGG
GTAGTTTTACGTGCAATGAATCCAAATACTGTAAGCTAAGTCCGTATGTTTCGTGATTCT
CCTGTCTTATGTCATTATTTTGATCAGAGTTCATTTGTTGATGGGTTTCGTTTTCGCGCA
TTTTGGAATAGTTCTGAGGCTCTTGATTGTGTTTTGGGGAACTTTGAGCCATCGCTTTCA
AGACTTTCTGATTCAACTTTCCTTGATTCCTAAGCTTGTTGAACTTGTTATCTGAAAAAC
ATTAATTTAAAAGATTATTAAACGTTTTATCAAATGTTTATTTCCTTTGTTCCTTTCCAA
TCTGCATTGTCCATAAATTTATCATACTTACTTAACAAATCAAAAAAAAACCTTCACTGC
AATAATATTTGTTAAGACAAAACCTTTTTTTTTTTTTTTTTTTTTTTTCATCTGCACTAT
TTTATTTGTAAGTAAAACTTATGATAATCAACGTCGACCATGCTACGTCTGTAACAACGT
AAATCCAAGTACCTACCGTATCTTCGCTCGTTCACGGGAAAACTGTAATGAAATATAATT
CAAGTTAGTTCAAATATTTACCAAATGATATCCAGCTTCGTGAGTACGCCGGCTGCAGTC
TCCATAGCATAGCTAGAAGGCAGTAACCAGTGCAGTGTTGCACTTAATCTAAAATTGCTT
AAGACTGAACAGTCAGTAGCACTTGTTTGAGGTCCCCTTAAGACGACAGCTTAAGCTAGT
TCGTCTCAACTTTAACCTCTTAGTTGGAGATCAAAGACATCCTTCAAAGGGCTCTAAAAT
CACAACTCTTGTTTGTTCCTGGTGTATATTTCATGCCAAAAATTGTATTTTAATTCAGCG
TTATGATTAGTTTGTAAAAACCTAGTATTCCTCCCCACAAATAACGGCTGATGAGATGTG
TTTGACAATTTTCAGTAAATAAAACTGCGCGATCTTCCACTTATTTGTTCTTCCAAGTGG
AATATTTGCTACATGTGAAGCATACCGGATGAATAATCTTTCAAGAAACCTAAAAACCAC
TATTCATCGGATTTTGGTCCTCAACGTTGGAAAAACAAAATAAAAACGCCGTACGATCCA
AGAAGATCCACCATTTCAGAATTGATTCACGTCAGAATTATTTTTTGCGACCGAAAACTT
GCCTATTATTTTTTTTACCTACTTTTGCAGATTTGACATGCAGATTTTTCACGGAACTTT
CGCCACCTAAAACTGTTGCGTTTAATACATAAACAGCCATGACGACGAAAAAAACTAAAT
AAAGAAAAAACTCCTTCCAAGTCGGGTTCAAATATCGAAAAAAACAGCTACTCAAAAAAG
GTAAACTGAGCAGAAAATATAACCCATCCGGTTACAAAAATGGCAAAACAATTCAGATCA
GTTCGATGAATAGATGAAATTCCTAAGTTGTAACGTTCTTCGAAAAAAATCTGTGTAGAT
TACTGTAGAAATGCTCGATGGACTATAGTAACTATAGTTAAAAAAAAACAATTGCAGAGA
GTGTTAGAATTAGTATTAACACGATGAGAACGAAGTGACGACGAATTGAACTTAGAAACC
ATCAACTCACATAGGCTGGAGTTCAGCTAGGGCGATCAAATTAACTGTTCGAATTTCGCG
TTTGTAGGATACTACTAGGATACACTTTCGAATGTGGATTGTTTGATTTTGTGAAGATGT
ATGTAAAGATAGACAGGAGTGGAGAGAGAAGACATATTTCGTCGACCCCATCTAGATGGG
ATAAGGTAAAGCGAAAGAAGAAAGACATTTTTGGATGTGGACACAGCAAGTGAAATTAAT
TTAAAGCAAAGACAAACAAGCTTCTAAGATCTTGAATACAGTCTGGTAGTAGCTGGTGTA
GTGCCATGACAAATAAAACGAGTTTAAACAAGAGTCTATCTTGTTTAGTGCAGAAGTTCA
TTTGCGATTCCATTATCAGATCAACTCCATGGTATCATATTATTAATAAATATTTCAGCT
GAATCAGGAAGTTTGACAAAACCAAGACGAAACTCTCAAGATTCCAGACGAACTTACATA
GGTACTCATACTCGTACATCCGATGTAAATAAAATAAGCTTTCAAAATTAGCAAAGTCCA
AGTCAGCGTGTCGTGAATAGTGCATTCAATATTAAAACTCGATTAACAAGACGAAGGACT
CCATAGATTTATAAATCTTAAAAGTGACAGCACGAACAATTTAGGATTTTGGGGAGACCC
ACAGCTCCCAATAAACCTGAGAATTGATATTTGACTGAACTTGGTGATCGCTAACGCTGA
GATTACCAACTCTATTCTAACCCCAGAATATTTTTATCCAAATCACAACAATTTAAAACT
CTAAGCAAAAAGACAAAGGAGTTCCAGACCAAGTAATCAAAATACGTCTTCCATTTCAAC
CATATTAGGATCAAGTTCCTTATTTTTTCTGCGACACATTTCTTTCCATTGCACGATTTC
TTCCTCAGTGTCTTTGAAGCATATTCTCATCAGAAGTATTTTACTTCGATCATCTGTCCG
TCAACCTTAGAGCCATCGAAAAATTCTAAATATCTTGTTTAGAAAATTATAACAAAACAG
AAGTCAAAGTTTTGGTTAGTAAAAGAAGTTAGATTGAGAAGTTAGAGATTTTTATCTGTG
TGTGTGATATGACTGTGTATATCTGTGTATAAACTCATTCAGACACTCGCGGTTTTCTAT
AATACTTTCATGCATTTTCAA
(3861 bp)

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