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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11366c12_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA_pseudouridylate_synthase_domain-containing_protein_2-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0019239 F deaminase activity
GO:0031119 P tRNA pseudouridine synthesis
GO:0044822 F RNA binding
Transcript
Level		FPKM:18.11 TPM:17.75
ORF EntryO_TrvaFAMAMG13912_complete:A_TrvaFAMAMG_TR11366c12_g1_i1
Sequence
(Nucleotide)
GCGGGAAACCAATCGTTGGGTGAGACGTGTTACCCAACGATTGGTTTCCCGCGTAATTTT
TACGTAGCCGCGAAAATTTTTAATTTTTTTAGTTTTTACGTTAAATTTGTTTTTTTATGT
ATGTTTTTTTTTGTTCTTTATTCGTGTCGTGTGGTTTTTGTGGAACGAAGATTTGTATGA
GGATTTTCTGTTTCGACATCGGACGATAATTGAGTAGTGTAAAGTGAATCCTTGTTCTGA
TGTCCGGCGACCGGTAACGTAGCCAGCACGTCGACTGCAACAGCCGAGCTGGCGTGGTAC
GGGACCGGCGGCGGGATGCAGGCGGGGGGAGGGTGGTTCCTGCCCTGGACGATGGGCATG
CAGAAGTTCGCAGTAGCCTTGCCGATGGGTGGGATGGTGCCTTTGGTACCGCCATTGTTG
GCAGCTCTACCGCCTGCACCGCCGCCTTTGAGGCTGATCGCGCCTCCGTTGCAGCATCAA
GCGCAATCTGGGAGAAAGGGTGAAAAAGATAACGGCAAAAACATTATTCTATCCTGTGAG
AAGAGGAAGGCGGACGATAGTGATATCAATAAAGACTTAAAAAAGGCAAAATTAGAAACG
AAGGCTTTAAAAGCGAAGAGGCCTGGCTTCACTGACGATAGATATAACGAGACCTCATAC
TACATTGAAAATGGTCTAAGAAAAGTATTCCCTTACTATTTCACGTTTACAACCTTTACG
AAGGGCAGATGGGTCGGCGAGAAGATTCTCGATGTCTTCGCAAGGGAATTCAGGGCCCAC
CCGGCAGCTGAATACGAAAGATGCATCAGGGCAGGAACCCTGACGGTCAACTATGAAAGC
GTAGACCCTGATTACAGACTCAAGCATAATGATCTACTTGCGAACGTGGTACACAGGCAT
GAAGTACCGGTCACCAGCCAACCGATCAACCTCGTTCATATCGATGAGGACATTGTGGTT
GTCAACAAACCGGCCTCAATCCCCGTGCATCCGTGCGGTCGCTATAGACACAATACGGTT
GTGTTCATCCTCGCCAAGGAATATAACCTGAAGAATTTGAGGACAATCCACAGACTTGAC
AGGCTTACATCAGGGTTACTCCTATTCGGGAGAAGTCCGAAGAAAGCGAGACAAATGGAA
CATCAGATTAGGAATCGACAAGTCCAAAAGGAATACGTCTGCAGAGTCGACGGAGAATTT
CCCGATGAGGAAATAGAATGCACGGAGCCGATAGAAGTCGTCAGTTATAAGATAGGTGTG
TGCAAGGTTTCGCCTAAGGGTAAAGACTGTTCCACTGTCTTCAAACGGCTTGGATTCAAC
CCAGCAAATAACACCAGCGTCGTTCTGTGCCGCCCCAAGACCGGCAGAATGCATCAGATT
AGAGTGCATCTGCAGTATCTGGGTTACCCAGTAGTAAACGATCCCCTCTACAACCACCCA
GTGTTCGGTCCTCTCCGCGGTAAGGGAGGTGACACTGGAGGTAAAACTGATGAACAACTA
GTCAGGGACCTTATAGCCATCCACAACGCTGAGAACTGGCTTGGCGTTGACGCTGCTGAT
GACGATTTACTGTTTTCGAAGCCGGTATCTGATGATAAAGTTGGTGAAGATGACTGTGAC
ACGGGTCCGGCTTCAAGGGAATCATCTCCGAGATTAGATTCTCCAGCACCAGGAGTCACG
CCTTCATCTGTGATGACGCTAACCATGCCTAGTCCTTCAAGCGGTGCCGAAGCTCCGGGT
GAACCATCAACGTCGCCCGCTCCACCTTGCACCATGGCTCCATCGCCGACAGCATCACTC
GCCATGAATGAAGACTCGAACGATGCTAAGTCGGATAAAGTGACAGTGGCCACTCAGACG
GGGTGCGCGGAGCCGGGCAGCGCGCCCGCGGGGGGAGGCGGGCTGGGTAGCGCGGGGGGC
GCGGTGGGCGAGGTCATCGACCCGCACTGCTACGAGTGTCGTGTGCGGTACCGCGACCCG
CGACCCAGGGACCTCGTTATGTACCTGCACGCTTGGAAATACAAGGGCCCCGGCTGGGAA
TACGAGACGGAGCTGCCACAATGGGCGAGCCTCGACTGGGAGGAGCCGGACAACTCATAG
TCACGCGACATGGCACCACTGTGGACGCGCCTCGCGACACTACACATAGACCATTCAAAT
GAATACTAAGACCAAATTTGTAAACATTATTATAGGACTTCCGTATATAGTAGCTTATAG
AATGTTAATGTTTTGTTGTAAATTCGGGTTCGGAGTAATAAATATTTAAACTACCAAACG
AGGTGATTGATGTTGGTACATATTGAAGGAAGATAAATAAATAAAAAAAAATTGTTTAAA
TCAACATTCGTCAAAACTATCCTAAATAAAAATAATTTCGGACAATAGAGTGTTCGCTAA
CAACCTCAAGTGATCTCGCGC
(2421 bp)

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