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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11349c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_calypso_isoform_X2_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0003682 F chromatin binding
GO:0004843 F thiol-dependent deubiquitinase
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0035517 C PR-DUB complex
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
Transcript
Level		FPKM:2.09 TPM:2.04
ORF EntryO_TrvaFAMAMG13764_5prime_partial:A_TrvaFAMAMG_TR11349c0_g1_i3
Sequence
(Nucleotide)
TTTTTTTATACACTTGTTTTATTTAAGCCATTCCACATCTGACTTGTAGATCAACTTCTA
AGCTTAAAAACTAGTCTGAAGAAACATTTAAGAAGATCAACTACTTAAATATGATTATAA
TTCCTAAATAATGTACTAAAAGTACAGAAAACCATAAACGCGAATAGGGCCGTCGCTGAC
AGTACGAAATGTCAAAATAATTTCTAATCTTTATCCTTATTTCAATAAAAGAACTTAAAT
TACTTAAGTTCAGTACAATCATCACCGAAGGTGAATACAGATATAATTACAAAAACTTGT
GATATTTAAGTATGATTATTCTACTAAGTGATTATCACATATAAATTCATAGTAAACGTG
ATATTATTTCCTCGTCCGTGGTCGTGGTCTCGGTCGCGCCCTCGGCCTGGGTCTCGGTCG
GCGTCTCCTCACTCGTGGCGACCGTCCTCGCTCTAACTGCGCGGCGACCAGCTCCGCCAG
TGCTCCTCGCTCCGTCAACATCGACAGGAAAGTACAGATGAACTCGTCGTAGTTGTGAGT
GCGCCGACAATCGTCCACCTACATGAGGAAGACTTATACATATCTCGTTTATCATTTTCA
TCATTCAGAGCCTGCTGACATGATTGAACTTCACCAACAATGCAACTCATTAGTGCATTT
AGTTCAGAGTGAGAGAGAAGCAATTTTCGCAATTTGTATGGCTGTTCAGGAGCTACTTCA
GAGCACAATAGAATTGGTGACTCATTACTTCTTACTAGGGCGGTTGTCGAAGTTGGGTAG
ATATCACCAATAATTTGACTGTCTCTGTTTGCTGTAACAAATTTCACTACAGCTCCTTGT
TCTACAGGATCCACTAATAAAATACTACTGTCTTGATGTGGTCTATCCATAGCACCAATC
TCAATAGTAATAGGTAAAGTGTAGTCTAGGTCGTATGTTCGTAACTGTGATGATTCCAAT
GCTGTCAATATAGTTTCTTCACTAATATGCACCATACTATCATTTAGTGATGTATCATTC
TCATTATTAGTTAGTAGTTCATCTTGTCCATTATATTCCCTATTTTTCGCTACCATGTGT
CGTAAATGTTTTCCAATTTTTGATATTGCTTCTTTAACTCTTTTTTGATTAATTTCCAAA
GCATTGAGTCTTTGAGTTAAGGCTATCCTTCTGTCTGGTACTACTGCCATAAGATTAAAT
CTGATATCATGAACTTGTTCTCCTGCATCTCTGCCCAGCCTTTCAGCCATGACCCTCCTG
AATTTATC
(1268 bp)

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