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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11349c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_calypso_isoform_X2_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0003682 F chromatin binding
GO:0004843 F thiol-dependent deubiquitinase
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0035517 C PR-DUB complex
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
Transcript
Level		FPKM:2.88 TPM:2.82
ORF EntryO_TrvaFAMAMG13762_complete:A_TrvaFAMAMG_TR11349c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTATACACTTGTTTTATTTAAGCCATTCCACTTTTGACTTGTAGATCAACTTCTA
AGCTTAAAAACTAGTCTGAAGAAACATTTAAGAAGATCACCTACTTAAATATTATTATAA
TTCCTAAATAATGTACTGAAAGTACAGAAAACTATAAATTAAACCATAATAGCTTATACA
CATAAATGTTTTGAAATATGCGAATAGGGCCGTCGCTGACAGTACGAAATGTCAAAATAA
TTTCTAATCTTTATCCTTATTTCAATAAAAGAACTTAAATTACTTAAGTTCAGTACAATC
ATCACCGAAGGTGAATACAGATATTATAATTACAAAAACTTGTGATATTTAAGTATGATT
ATTCTACTAAGTGATTATCACGTATAAGTTCATAGTAAACGTGATGTTATTTCCTCGCCC
GCGGTCGTGGTCTCGGTCGCGCCCTCGGCCTGGGTCTCGGTCGGCGTCTCCTCACTCGTG
GCGACCGTCCTCGCTCTAACTGCGCGGCGACCAGCTCCGCCAGTGCTCCTCGCTCCGTCA
ACATCGACAGGAAAGTACAGATGAACTCGTCGTAGTTGTGAGTGCGCCGACAATCGTCCA
CCTTATACATATCTCGTTTATCATTTTCATCATTCAGAGCCTGCTGACATGATTGAACTT
CACCAACAATGCAACTCATTAGTGCATTTAGTTCAGAGTGAGAGAGAAGCAATTTTCGCA
ATTTGTATGGCTGTTCAGGAGCTACTTCAGAGCACAATAGAATTGGTGACTCATTACTTC
TTACTAGGGCGGTTGTCGAAGTTGGGTAGATATCACCAATAATTTGACTGTCTCTGTTTG
CTGTAACAAATTTCACTACAGCTCCTTGTTCTACAGGATCCACTAATAAAATACTACTGT
CTTGATGTGGTCTATCCATAGCACCAATCTCAATAGTAATAGGTAAAGTGTAGTCTAGGT
CGTATGTTCGTAACTGTGATGATTCCAATGCTGTCAATATAGTTTCTTCACTAATATGCA
CCATACTATCATTTAGTGATGTATCATTCTCATTATTAGTTAGTAGTTCATCTTGTCCAT
TATATTCCCTATTTTTAGCTACCATGTGTCGTAAATGTTTTCCAATTTTTGATATTGCTT
CTTTAACTCTTTTTTGATTAATTTCCAAAGCATTGAGTCTTTGAGTTAAGGCTATCCTTC
TGTCTGGTACTACTGCCATAAGATTAAATCTGATATCATGAACTTGTTCTCCTGCATCTC
TGCCCAGCCTTTCAGCCATGACCCTCCTGAATTTATCTGTCCAATCCTCATCAGATGCCC
AAGGGCCGTGATCCATAGGATATGGTTTTAGACCATCCAGTTCAAACAAATGTCCATTGA
TTGGTACTAAACTTACAAAATGGTAGGCTTCACCTGTAAATCTTCCAGTTGAAACACCAG
CATTTTTATCAGTTTTTTTTCTTGCCTGCGGTATTGCATGTGCATTGTGAGCACATGCTA
GCTCAGGTGTATTGCCTATTGCCCATCCTTTGTTCTCAGGATTCATACCCACTGTGTGAT
GTTTCAATCTACTGAGAGTTTCTCCTAAATGAAGGTTTGGACAATTTAGTAAGATGGACA
GTAAAGCATGGGTTGCACAACTATTGGGTACCATTTGTTGTGCGAAAAATATATTGTTGA
TAGTCTCCTCATCTCGCACAAAGCTTTCGATTTGTTCAACAAATTTTCTTCGCGATCTGC
GTTCTTCTATCCACCTAAATAAAAATATGAATCCGTACACTGGACTCTCCAAAGGTTTAT
GAAGGTCATAAATCTCTTCAACCTGTACTCCCTTAACACCAAAATCTTCCAATAGTAATG
TGAAAAGGCCGGGATCGCTTTCTAATTCTAACCAGCCTTCTGTGAGGCTGTTAAGTTCTA
CCGGCATATTTTTAATTCAATTATTGTTTACGATTATTGAAAACAATACTTCTCTCGCTC
ATTTTTTTTACAGATAGTTCACGAGCTCATTGTTCCAAGGATTGTATTTATTGCTTCTTT
GTTGTGATAGCCCATTCAATATAATTCTATTGTATTGAAAAAATTAAATAGTTTTCGCAC
AGTGGACCGAACGGG
(2115 bp)

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