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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11346c6_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA_polymerase_I-specific_transcription_initiation_factor_RRN3_isoform_X1_[Amyelois_transitella]
Ontology
GO:0001164 F RNA polymerase I core promoter sequence-specific DNA binding
GO:0001701 P in utero embryonic development
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0007000 P nucleolus organization
GO:0007028 P cytoplasm organization
GO:0008283 P cell population proliferation
GO:0010976 P positive regulation of neuron projection development
GO:0042254 P ribosome biogenesis
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048872 P homeostasis of number of cells
GO:0070063 F RNA polymerase binding
GO:1902254 P negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator
GO:2000142 P regulation of DNA-templated transcription, initiation
Transcript
Level		FPKM:9.81 TPM:9.61
ORF EntryO_TrvaFAMAMG13718_complete:A_TrvaFAMAMG_TR11346c6_g1_i1
Sequence
(Nucleotide)
CGCATATCGGCGCACATTGTGCACGTGTTCAAAAAGTAAATCGTGTACAATTTAATTGCT
TTATCTCAAATAATTTAAGTTAAACAAGTTATTACACTCCTTAAACTCCAAAAAAAGTGT
AGGAAAAGTACCCTTCATAGCTATAAACAATGTAACAATCATTTGTTAACAAGCGATGTC
GAGAGAAGGTTATAGCCCAGAAAAGAAGGATAGTGATAATAAAGTTGTTTTAGAAAGATT
ACAGTCGTATCTTAAAGATAAGAGAAGCACAGAGGTCTCGGAGACCAGTGCCGGGTACAA
CAAACCGAGTACCAGTTACGATCCCAGCACCCACTTAGTTCCTAACATAGAAGACAGCAG
CAACATACTTCGCGAAGTTCTTAACTACAAGAAAGCTGAGTTACTTCGGCAACCAGACGT
GGCAGACTTCCTGAAGACCATCGCCAAGGACCTGAAGAAATAATGGCGGTAGCAGCTAGA
AAAAGCGTCGCATCTTTGATGCAAAAAACATTGGATCGCCAAGCGGCAATATCTCGTACC
AGACTGAAGTTCTCCAAAAAGCAAATAGAACAGATACTGCTGAACTACGCGAAGACAGGA
AACGCTGGACCTTATTCAGATCTAGTTCGAGTTTTGAGAGATTATCCATTGACCGATGAG
AATTTTCGCATCGTGGTCGAAGATTGTATCTCCTGTGTGCTTGTTATTGGACCGGACTTC
AAGCAGTTCGTAGATGTGGTCTGTAACATTGAGTGGGCCAATAGGAGCGAGGAGCTGGTC
AACATTTTCAGTACCTTCATCATAAGTCTGGTGACCGCTCACATTTACCACTGCCCGCAA
GTCATGAGCTGCTTAGTCAAAGTATTTAAAGAAAATGAAGATAATTGGGATGATACTCCA
CCATCAGAAAAGTTAAACAGCTGGTCCAACATCCACACGGTTATAGCTCAAATCATTGCA
ATAATGCCAATGACAAATGAACTTCTAATGCAGACAATAGTAGACCAATTTCCGTACCAC
AAAGCTGGGTGTAGTTCAAATAGATCCTTTATATATAACCTCATTTGGCTCACCAAATAC
CTACCTTCATTGACTGAAGAAATCATGATGGTTATTATTAATAGAATGATTGTAATGGAT
GGTAACATAGTAGAAACAGGCAATACTAAGACACAGAATGACACCTTATTCGACATGGAT
ATTGAGAAATGCAATGATGTATCAGAAACTTTAGACTACTGTATGCTAGAAATATTACGA
TGGTTGCAGGAAGAACGAGATCCAATATTAAACCTCATGTGTAGTGCTTTTGAAAGGCTC
ATCTTACCAACTTATGGAATCAGACATGTCCAATTCTTACTACTATACACAATATCTATA
AACCAACAATGCGCGGACAGTATTCTCAACAATCTGTGGACAGTAGCAGCCGGTCTTCAA
GGCTTGGGGCCTGGCGCATTGGCAACCAGACGCACGGCCGCCAGTCACCTGGCAGGCTTA
CTGGCACGATGCGTGAGAGTGCCAAACACAAGATTAATAAGATTTTTGAAGAAGATGACA
GATTGGTGCCATTCTTATATTAGTGCGGCTCAGGAATCTACTACTTCTGCGGATAATTTA
AAAGCGCATGGTGCATTTCATGCGATATGCCATGCAGTGTTTTATCTAGTTGCATTTAAA
CATCAGCACTTATTCGTTAGCAAAGAAAGCATAAATTTCGTAGAATCGCTCAACCTTCCC
CGTCTTGTGGCCTGTTCATTGAATCCTCTCCGTACATGTCCCCCGCAAGTGACGCGAGCG
TTCTCCTCGGTCACTCGGTCGCATCAAGTAGTATATTGTCAGGCTATCATAGAGAACAAT
GCGCGACACACGTTACAGTCGGCCGACGTTCTGCAGTACGATGAATGGTTCCCGTACGAT
CCCTATACGTTGCCTAGAAGTGGCAAACTAATATGGCCGCTGTGCATAGACTACAAAGAC
TGGCTGAAAGAAGGTGAAGACGAAACTCAATACTCAAACATGAAAAAGAAATTAGAAGCT
GATGACGATGACTTCCTAATGTCCATTAGTCCTTGTTCTAAAATAGCGAGCTCTTTGTCA
AATGGAGTTCTCCCCGGCTTTAGAACAAGTGAAAGTATACCTTATTAAATTAAACTGGCT
ATTTGATTATAAAAAAAACTTTTAGTTTATATGGAAACTAATAAACTCTGTCCATAACTC
GGTTCAGAGAGAAAATACTGAGATTTCTAGCTAACTAAATACATAGGACAAAGGGTTATT
TTAAAATATATTTATTAATGAGTAGTGTTGGTGCTTTATATGTTGTGGAAAGATCATAAA
GTTCTTGAATTTAGGAAACAATAAAATAACCAAGATGTTTCATTAAATTTAAACACTAAC
AATTTTATTACCATTCATTTCAAACGAAATGAAACACTTACCTTACCTTATTAAAGGAAA
GAAGAGTACATATCGAGGGTATAGTGCTAAAACCCAATAAGTGTCAAAACAATCTAAAAA
TGCTTT
(2526 bp)

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