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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11336c7_g5_i8
Scaffold_id
NCBI non-redundant
(nr)		putative_UPF2_regulator_of_nonsense_transcripts-like_protein_[Danaus_plexippus]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_TrvaFAMAMG13442_complete:A_TrvaFAMAMG_TR11336c7_g5_i8
Sequence
(Nucleotide)
CTACGTATCACCGATGGGGGAGGGGGGGTTAAAAAATGCTAAAAAAAGATCACGTGATTA
ATGGACAACCCCTTAGCAAAATCTATTTAAATTTCTTAGGTCCAAATATAAGGTCTGCAT
CGGGCGCTCCCTTAGGATGTTGGTATTTCTGTCGCACGTGCTGCCCTCTGTTGGGGTTGC
CGAGTCCGCCGGAGCCGCCTCCGCTCTCCGCGCTGTATTCCTCCTCTTCTTGTCGTTCCG
ATATGTTAAGTGTTAACCGTTTAACTCGTTCCATTTCTTGTTTGTCAGCGAGGGCCTGTT
GTTGTAGATTGCTAGCGAGTTCCGGCGGGGCGCTGAATGACTTATACTGCGGTTTCGTTC
CTTTACGAACCATGAGGACAAACTCTACGCCTTCTTTACCTTGCAGTAATTGTTCGTAAG
TTTTCTTGGTAGTTTGTCTGCAGGTCATGGGCACGGCGATGTCTCGTTGTTGCGGTCTGT
TCTCACGTTGTCTCTCTGCGATGTTTTCGGTCACCATTTTCTCGAATGCCGATTCAAATT
CAACGTCTTCCACAACTTTAGAAGCCGGTCTCCGTGGTTCAATTGTTATTTCATCTTGAA
TTTCGTTTTCATCATTTATATTATTTTCAGTGATTGGTTCGTCATCGGAACTTTCTTCAT
CAGGCAGTTGAGGATTGTCAGTTTCATCATCAGTCTCTATAATCGTATCTAAGCCATCGT
TCACACTGTCGTCTCCTTGATCATCGTTATCATTTTCTTCTTCACCTAATTCTGGATATA
AAGCTTGTCGCAGTTCATCTATAGCATCCTTACATTGCTGCCAGCTCGTAAACAAAGTCA
ATTTGGGTCGTAACGTCGTTAGACATTCTTGATAAATGTACTTTACGTAAATAGGAAACT
GATAGTCTTTTGTCCAAATGGGGTCTGACAACTTGAACCAATAATAATTTTGGAAGAAAG
TTAGGAAATAGTCCAATCTTTTCTTGCTTGAGCCACTGTTAAAGTACGCACCGCAAGTTT
CAAGAAGAGCGCAGACCAATCTAATTCTGAAGACATTATCGGGCGGATCTAAAGGAGAGA
CATTCCCGTGCTCATTGGTCACACCAAATGTTATAAACGAATATAAAACAGTAAAAACGT
CTCGTGAATCCAGTAACTTGTAATTATAAAGTTCTCCTAAATACCGTACTGTAGCTATCC
TTCTCTGGTTATATCTGGGGTGTGGGTCTTCCATGGTTAGTCGTATTTCTTCTAAGATGG
TGTCAACAACTGCTGGTGCTACAGCTTCCTGCCAGATGGCGAGTTCGGCCGTGAGTCTGG
CAAGCGCTCTTCTGGCACTGGCACGGACCCGCCAGCCTCCAGCTAAATGTTGAATAGCTA
TTGCAGACACCTCTGGGTCATCCCAGTTCAATTTACGCATTAGTCTCAATATCTTTTCTT
CGTTACTTTTCTGTAAATCTTCATGGAGCACTTTTCTTATGAACTGATGTAGCGGCGGCT
CTTCTTCCTTGGGTTGAACAGGTGTTTCAGGAGGACAAACGTAGTAAAACGCGTTCTCTA
TTTGTGTTACGTAACGGGAATCGAGAGCTGAAACAGTCTTCTTTCTCATCATTTGCTGTA
AATAAATCATAGTCCTTTGATGTGTATCAGGATTGCAATATAGATATCTTCCACATGTTT
CGAGCAGATTGCATGCCATTTCTATATGGTGATGTTTAAAATCGTGTAACAGCACTTTCA
AACAATACAAGGCCTCCATTTTCGAATATAAATTAAATTTGACTAGTTCTCCAATAAATC
TCACAACTTTGATCTTAGATTCAATATTTATTTGATCTTTTTTCTTGACATGAAACTTAA
AATCTTGTTTTAACATTTGGCATAAATCAACACAAACTTCTGGTAATACAGGATATAAAA
TTGCTGCAAATCTTGAGTAAAATGGTAATAAATCCAATCTTGTTCTAGCAACACTGAACA
GAACTCTTGATAATTTCTTGCGATGATTCTTTGTATTGAGATTCAGTATAAAATCAACAG
CAGCATTGTCTATAAGTTCACGATTTATACAGTTTGGTAGTTCATTCAAGAATGTGTCAA
GTCCCTGTTTATTAGATACATTAGTTGGTTGAACCTCTTCTGGTTCTGCAACAACAGGTG
TGTCCTCATTGTCACTCAGTTCATCCTCCTTCAGATCTTCATCTAACATTTCTTCTGTTA
CTGTTTCAGTCTTACTTTTTACAGTCTCTTTCATTTGATAATTAGGCATAAAAACTTTCA
AATCTGGCAAGCTTGTGTAAAATGTTCTAGAATCTTCATCAGGCCAAGGGTCTGTTCCTG
CCTGCATCATGATGTCCTCGTTGCCTCCGATGGTCACAGTTCCTTGCGTCTCAATCACTG
TGAGACTAAGAGTGGGTGGTTCACCAGCTTCACCCAGATCTTCACCCAGTACTTCAGCAA
AGTTTTGAGCATTCGCCAGCAATTTATCATACGTGGTTTGATGTTGTTCCAATTGTTCTT
TTCTCTCCTGCGATAGTTCTCCCCTAGTGTGTAGAGTTCTCTGGTTTGCTGCATGGAGAG
CTTGTAACGCTCTCTCAGCCAAAAGATGTTTGGTTAGAGAAAGAAAGTAATCTTTTAGTA
GGGTTCTCACAGCAGTCTGTTTTTCTGCTGGAAGAAATGTATTCCGAGGCACAGGTATAT
TGTATTTTTCAGATGCTTCTCTTATCTTCTTAGGCATTAGTCCAGCATAGTCATCACCAC
AATGCTTACAAAATGATAATAAAATTGGTATATTGTTGTGCTCTTCTTTATCCATGTTTA
TTAGAACAGTTAACACATTGCCGAGAAGGGGCAAACCTGTTTTATTCATAAATATACCAA
CAGATACCAACTCTGCATAAAACCTTATGTCCACTCTCAATTTTGATGAATTTGTTATTT
TATCAGTAGCTTTGAATGTAAGAATTTTTTGCCAATTTTCGAAGAAGCTTGCTGAAAATT
CGGCATAGGTACGATGAAGGGCTGAGCAAAGAGTTATAGCAGCAGGAATATCAGACATTT
TTAGTTTTGCTTCTGCTATAGCAGCTGCCACCTCGGATATGTACTTAGTTAGATTCAAAG
TAGCAAAGTCTTTCATAAGTGCATCCAGTTGAGAGGCGCTGAATGATTTTAGTTTTTTGA
CAAATGTTGTATTCTTCTTCAGGCCAGAATCTAGTTTGGAAAAATAATTTTCTGGAGGGC
GAGTACAATTCAGATTAAGATTACGTATTTCATGTTTTTGTTTTAGCCTGGCTTCTAAGC
TAGCTGCATACTCTTCAACAGCCGCTTTCTCATTTTCTTCTGCTGTAGATGAATCCTCTG
GTGCGGATTCACTTGGTTCCTCATTGTTCGTAGCAGTCATTTTTTAATACAACAATAATT
TCATGTATCTATTGCCTGGTTGGCGTAGCCAGTCGAATCTTTTCCTTAATAAAATCACAA
AAACAAAACGGTGTCGTGC
(3499 bp)

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