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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11324c0_g2_i6
Scaffold_id
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.09 TPM:3.02
ORF EntryO_TrvaFAMAMG13361_3prime_partial:A_TrvaFAMAMG_TR11324c0_g2_i6
Sequence
(Nucleotide)
TTATAGTTGAAGCTAGTATGTAAATAAAGCTAAACATTGTATATTACGTGATTTAACCTT
TATCTCTAATATTTAATCAGATTTAATGCCTTTTAGTTACTGACCTACCTTATGCGTAGA
AGGTTGTTAAGACTAAAATAAGTGTAAATAAATAGTTTGTTTTTCTCAGTGAATCATGGC
CGAAAATGTCGAACACAGGTTATGGGCCCAGGATGCTATAACAGTGAAAACATTAACAGA
TACAGTGATTAGTTTTGGAATTATAACAAATTGTGTATTAAATAACTTCAACTTGCACAC
CGGCGGCACATCGATTTTTCTATAAAAAAACATGGGATCGAATAACAATATGACCCTGAT
CGAAAGATTGACCGGCCGTGATAATTTTGCAACCTGGAAGTTTGCAGTCAAAACTTACTT
AGAGCATGAAGATCTGTGGGAATGCGTATCAGGCTCCGGTGAGATAGATCCAAAGAAAGA
CGTCAAGGCAAAGTCAAAAATAATACTTTTAGTGGATCCCATCAATTACGTCCACGTTCA
GGATGCTAATAGTGCTAAAGAAGTATGGGAAAAGCTCTGTAAAGCATTTGATGACTCCGG
CTTAACACGTCGAGTTGGATTATTACGAGATCTCATAACGACAACGCTTGAAAATTGTCA
AAGTAGAAAGCTCCGGTGTCGCTATAACAGCAGATTCAATAAAAAGTAAACTGTTACAGG
AAGTCAAAAATCGTGATCCAGGTGCATTCTTTGTAAACGAGAGCAAGAATAATACGAGTA
AGCAACCGTTCAAACAAAATAAAGAAACAAAAGGACCGAGATGTTATTCGTGTAATAACT
ACGGACATATAGCCAAACACTGTAAAGTGAAGAACAGTAAGAAACAAAGTGATAACTCTT
TTGTAGCCGTTTTTTCAGCCACAAACAGCGACGACTCTGGATGGTATGTGGATTCAGGTG
CGGCGATGCATATGACAATGCATAAGGATTGGATTTATGATGAAACTTCACCACCGATCA
AAACCATCCGAGTAGCCAACAATAAAGAACTGCGAGTTGAGTCCTGTGGTAAGGTGAACA
TTAATGTCAAAAGTAAGAACGGATCTACAAACAGCATACAGGTAACAAATGTCCTTTATG
TACCTGAGTTATCAACGAATCTTCTCTCAGTCAGTAGCATCAACAATAATAAAGGCAATA
TAAAGTTTGACAGTAAGGGTTGTTATTTGTATAACAAAGATAATGTTGAAGTTGCTATGG
CAACACTTGTTAATAATATGTACAAGCTGAACGTTGTCTCCGTCCAAGCATTTTTATCAA
CTACTAATGATGATTTTTATCTTTGGCATCAGAGACTAGGTCATCTGAACTATAATGACA
TGAAGAAGCTGAAAGACCACACTAAGGGTGTGAAAATACCTCAGAACAGTGAACTAATCT
GCGTGCCGTGTATTAAAGGGAAACAGGCAAGGTCACCATTTCCACGTGAAGGTTCCAGAG
CAAGTCAACTGCTAGAAATTATTCACTCCGACATATGTGGACCTATGGAGGTAAATTCCC
TCGGAAATGCAAGGTATTTTCTCACTTTCACAGATGATTTCTCTAGAAAAGTGTGTGTCT
TTACTATTATATCAAAGTCAGAATGTCTAGATAAATTTAAGGAATATAAGTCCTATGTTG
AAAATAAATTAGATACGAAAATCAAGACACTCCGAACTGATAATGGCACTGAGTATTTAA
ATAATAACTTTACTGACTATTTAAAGTTACATGGAATTAATCACCAAACATCTATGGTTT
TATCTATCTATGGTTATATGTACCAAAAAGGCGTTAAATTTTAAATATGCTACACTTCCT
CTAAATTTCAGCCTTATCACCAAACATCTACACCGTATACTCCGCAGCAAAATGGTCTCT
CCGAGAGAATGAACAGGACATTGCTCGAAAAAGCTAGATGTATGTTAATTAATGCTAATC
TGCAGAAATCCCTGTGGGCCGAGGCAATCAGAACCGCTGCATACATCACCAACCGTACAC
CAACGCGAGCATTGAACTATAAGACACCAGAAGAAGTATGGAGTGGCCGTAAACCTAATT
TAAGTCATATGAGGATATTTGGTTGCGAAGCTATGATGCATATACCTAAGTAAAAATTGA
AAAAATGGGACTCCAAGTCATGTAAGATGATTTTTGTCGGATACTGTGAAGATAGTAAAG
GGTACAGACTACTTGATCTTAAAAGAAAGACAGTAACCAAAAGTAGAGATGTAGTGTTCT
TAGAAAGTTCTATCAAAACAGATACAGTACCAGTTGACTTGTCTGACACTGAAAGACAAC
AACAATTAAGTAGAAATAGCCTGTCTGAAAGCAGTGATTGTGGTACAGATATGTCTACTT
ACACTGCAGTGGAGATAAGTGATGATGGTGATGAGGAATATGTGCCTGAGCAGTCAATTG
AACCGCTTCCGGCCTCAAACATCACTCTCCGTTCACGTAGCAGACCAAATCCAACGGTGG
AACCTAAGTCCTATCTATGTATGGCCGATGTACCACAGACATATGAAGATGCACTTTCCT
CTAAAGACTCTGGATTGTGGATTGAGTCAATTAAGGAAGAATTGAAGGCACACGAGGACA
GTGGTACTTGGGAGCTAGTGAAGAAA
(2666 bp)

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