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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11311c6_g3_i13
Scaffold_id
NCBI non-redundant
(nr)		Zinc_finger_and_SCAN_domain-containing_protein_22_[Papilio_xuthus]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001708 P cell fate specification
GO:0001709 P cell fate determination
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007424 P open tracheal system development
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007489 P maintenance of imaginal histoblast diploidy
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0032876 P negative regulation of DNA endoreduplication
GO:0035094 P response to nicotine
GO:0035147 P branch fusion, open tracheal system
GO:0035156 P fusion cell fate specification
GO:0035215 P genital disc development
GO:0035220 P wing disc development
GO:0042048 P olfactory behavior
GO:0042332 P gravitaxis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048076 P regulation of compound eye pigmentation
GO:0055059 P asymmetric neuroblast division
Transcript
Level		FPKM:12.07 TPM:11.83
ORF EntryO_TrvaFAMAMG13219_complete:A_TrvaFAMAMG_TR11311c6_g3_i13
Sequence
(Nucleotide)
GTCATGGCGTCGCGTCTGATGTCACTGTGCTCCTAAGTTATTAAACGTCAAAAGTGTCGA
CGCGCAATCAGAATAGAAAATAAATTGCATATTTCGTTATTTCGTGTGTTAATAATGAAT
CCCAAAGTTTAACTGTGCAGTACCTCAATGTAAAAAGTAAAAACACATCAATAGTTACTC
CCAACAAAGTGTTTGTATATGTTCCAAAGAGAACAGGAAAATAATACGAGACAAATGGTT
TAAACTCGCACGTCGAAATCCTAAAGATAGGGAAAACGACCATAGAAGACATTTCAAATT
TTATTGCTACAACTGTCCAATACTGAATTGGGTCGGGCACCCTATTTAACTTTTTTATTT
CGAACAAAATGGATGCCGCTGCCAAATTCGCCGCCATTTCTGTGACGTCACTGGCAATGT
TAACAATACGGTTAACGAAGTCAAATATTAAAATATAATAATAATAATGAGTTATAATCC
TTATCATTGGTGTATTGTGCCTGAATGTAAGAATACCAGTGTTAAAACACCGACAAAGCT
ATGGATTCAAACTCCAGTCAATGTAAAAATGAGGAATACATGGCTGAAATTAGCAAGAAG
AGATCCAAAGTTATTGTCCGCTAAGAGTAGGTATCATTTCTGTGAAGATCACTTTAATCT
GGAAAATGACATGGAGAATTACACTGAATATAAGATAATGGGCTCAGTCAAACGAATACG
AATGAAACCTAACTGTTTGCCGTCCAGATTCGATTGTCGGGCAAAGAAAAAAATCACTCA
AAGTAAACCACGTTCTGCGTTTCTGAAACGACAAAGACTCTCTATTATCAAGGAGATTGA
AGAAAACACGAAACGCGAAAAGTTGATGTGTGAAACGCCTTTGCTATCTTGTAGTAGAGA
TAAAATGCTTCACGATGAGCCTGTGAGTGACCCCGTCATTAAAGAAAATCCTATTGACCA
AGACCCCGTGATTGATCGAGACCCCGTCAATGACCAAGACCCCGTCATTGATCAAGACCT
CGTCAATGATTCAGACCCCGTCAATGATCCAGTCCCCATCAATGATCCAGACCTCGTCAA
TGATCCAGTCCCCGTCAATGATCAAGACCCCGTCAATGACCAAGACCTCGTCAATTATGA
CGACCCCGTCATTGAAGAACACCCCGTCATTGGACAAGACCCCGTAATCGAAACAAGTGC
GACGTTAGAATGCAGGGCGTGTCTCGAAAATGTGGACAAAAATAACCTCATAGACATGTT
CCAATCTTGGTCTACGGAGCAGGAAGGTGAAGGAATTACCCTCGCTGAAGATCTTAGTAT
GTTAGCTCGAATACAGATATCATCTACAGACGCGTATTCCAAATTCATATGCTTCTCGTG
CCACCAGAGGTTACTAGACTCATGCAGTTTTGTTACAAAAGTACAGAAAAGCCAGCGAAT
ACTCAAAGAAAGATATAATGTAGCCAAAGAAACGGAATGGCCAAAACCGATACAGATACA
AAATAACTCTATTTTAGTAGGAACCAATGAAGTTGAAATAAAACAAGAAGTTTTGTCTGA
AGACGAAACCCTGAGTTGTGATAGTAATCAAATGATGGAGATTAAAATAGAGCCTGAAGA
ATTAGTGGAACCGACTAGATTTGACGTACATTCCGGAGAAAATGAAGAATTTGATACAAA
CGACCCGCCTGCTTTACAGACGAAAGATATGATGCCTTTTAGAATAACTGTTAATGGTAC
AATATCATCAGATCAATTTGAACAAACTCCCGACATCAATCACGATAACCACGATAACCT
CAGTAGAGAAGATTTATCAGAAACACGTATTAAAGATGAACCGGTCAGTGATAATGAAGA
TTCTGAACTAGTGCATACAATGCCTCTTGAGTGTATGCTGTGTATGAAGTCATACAAAAC
TGTTTCAGGACTCAAATTTCACGTGATCGCAAAACATTCGTACGGCTCAGTAAATAGGAA
CAACAATAGTACTGCTAAAGTGAATTCCAATGACGATGATAAAGTATGTTCAATATGCAG
GCGAAGTTTCACAACGACAACGGACCTGATGGTTCACGAGACGTGTCACGGTAAATACGC
GTGCTACAACTGTCAGGATCAGTTCGACAGCTACGAGCTACTCACACGACACACGCACAC
GTGCAATAGCGTACACAAGAAGAGGCAGTTGACGCTCAAGACATTGGACGATGCGAAGAG
ACGGCGTTGTGAATCTCCTAATTTAGAAGACAGTAATTCCAGTGATTACATTAAAAAAGA
ACGATTAGATAGTGACTATGAAATGGAGCAAACTGACAGGCTCAGCGATTTTGAACCTAA
TTATATAAAGTCATAAGACTGATTATATGTTAAATATATGTTCAGTGATAGTGTTTATAG
TGTAACTAGTGAAAACTGTTGTGAAAGACAAGATAATTAAATTGTAGCAATTGACAATAT
TTTTCGAGATGTGTAAAAGTGAAAAAATTCAGTTTAGAATTTAGCCAAATAATTTTGTTG
CGATACTTAAAAATACTTTGTTTCAATTAATTTGTTTGATTCCATAATTAATCCAGGTAC
CTAAGACTTATTAGAGATTATTGTATCTATCATTAAATTTTATCTAAGAAATAACAAGAA
CTAGTTCTGTTTATGAAATACGGATTGTAATACTAAAAATTGATTTGAATTTTATCCTAC
ATAGCCTTTTAATGTTTTAGAAATATACTAAAATATTTGACAATGTCTGATGATTTACTC
ATATAATTTGTGATTCGAAATTTCTTTAGTTTTTTGTATAACTATGTTTTTAATGAACTT
GGCCTCTTTTTCATCTACATAGTTTTCTGCTAGAAGACCTTTTATGGTGCATTTTTAGTT
TAATATAAAAAATCTGATTATCTTTGACGGACTTCATGATAGACAACCCAGGACTTTGGC
ATTTCAGTTTTTGTGAATGAGTTTTGAACAGTAATTTATGCAGAACAATGTAATTAATCA
ATTTGTAAATACTTTTTAATGTATTAGTTATTACATCAATTGTGATTTGTAAACTATGAA
AAATGAATCTTTTTAAAATAAATTGTATAAACAAAAA
(3097 bp)

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