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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11305c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_tetratricopeptide_repeat_protein_21B-like_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072372 C cilium
GO:0097542 C ciliary tip
Transcript
Level		FPKM:13.21 TPM:12.95
ORF EntryO_TrvaFAMAMG13109_complete:A_TrvaFAMAMG_TR11305c0_g1_i1
Sequence
(Nucleotide)
GGCGATGTTTGGGGGAGACCTATGTCCAGCAGTGGACGTCTATAGGCTGATGATGATGAT
GAATGTTGTATAAGCGTGTTTTTCAAATTACATTTAAAACACCTTACTTTGCCCATCCAT
GTTGGTACCCTTCAAATACATTCCCAAATTTATCCAATGTGAAGTTTTTCATTCATTCAT
TTGTTCACTCGTCAAAAACGATCTCAAGTTCTTAAATTAGTTTTAGCTTTCTCTAATATA
TCCTTCTTTATCTTGGGATAGTCCGGGTGTACTTTCAGAATGCATCGTGAAACAATAATA
CATTCGGGATATTTCTTGAGTTTGAGATAAGCGTGTGCCAGTTTATATCCGACTGAGAGA
TCATTTTTCCCGCCAAATGTCCAAGCGTTGTCATAGTTGTGCGCGGCATTTTTGTAATTT
TGTTCTTTTTCTGCTATTTGACCTAGATATTGATAAGCTTTTGCACACGAATTATTGTGG
TTTAATATTTTTGTGAGCAACTCCTTAGCGGCATCTATTCTTCCAGAATTGATTTGTCCC
TCTGCTACTTCCAACCAACATCTTTCCAATCCATCGGCTTTTTCTGGAGACCAAACTATA
GATGATATTGTTCTTTTGAGAATATTTTTTGCACGCGTCGGTTGTTTTATTATGTTGTAC
GCGTTAGCAATAGCTAATATCACGTATGGGTCGTCATGGTAACCATCATCTGTGACGAGT
GGTAGCAAATCTTGAAGTACTTTCTCAGCTTGACTTTTGTTCTTTGTTGCCAACTGAAGT
AGTGCTTGTAAAGGTTTCCGTTCGACAGGATTCACTTCTACCAATAGTTTCTCAGCCGTC
TTCAAGGCTAAAAGACGTGTGTCACTGTCGTCCGCGCCGGTGGTGTTGTCCGCGTGTTGC
GACAGACAGAGCAGCACCATGCGCGCGGCGGCCCCCCACCGCCCCGCCACGCGCCCCGCC
CCGCGCGCCGCGTTCAGCGCACGCAGCGCCGCGTTACACTTGCCGCCGTACGCGCTGCAC
ACGCCCGCGCAGTACGAGTAGCCAGGGTCATCCGGATCTTCTAAATGTTGTTTAGCAGTT
TCCAGAGCTTGTTCTGCTTCACTTAGTTTCCCTCGTCTCCACTGAACCTCGATGAGTTGT
GACAAAGCCTCCCAACTTGTTGGTTTCACAGATAAGATTTGATTGAGATGTCGTTGTGCC
GTTTCTAAATCCACCTTACGAAAAGCGAGATCCGCCATCATCACCGCCGCCGACTCGTTA
TTAGGGTCTGCGTTTAACAAAACTGCGCAAGTCTGCTCGCATTTTTCCGTGTTGTTTATC
TGTGCATAAAGTTTAGCTAGTGCCAACAATGTGCTAGGTTCTCTTGGAGTATGGATCAAG
GCCTCTGAATATAAATTAGCTGCAGCGGCCGGCTCTCTCATGCTCTTGAACCTGGCCAAA
GTACATAAAATATTCGACAATTGCTTCTTTTCCTCCTGCAAGTCTCCTTTCGAGTCTATC
TCCAGTCGTTTCACAATGGCCGATTGTAGTTCTTTTGCTTCGGTCAGAATTAAGTTCACA
TTTCCTGGAGTAGGAGTTTTGAGTTCTCTACTTTTGGCTTGCAGTAACAGCAATCGGACG
CGTCGTTCCAACGTTTTGATGTCTTTCTCTTTATTGTAAACCTGGTTCAGTTCTGTTGAT
ATTGTGCTGTCCACTTTATCAAATTGTTTTAACCTTATAAGAAGATCGAAGTACTCAAAC
TTGAGATCATCGTCATTCAATAATTTTATAGAGTTCTCATAATGCTGCAAAGCTTTATCA
AACTCATGCATCTTAAACAACGCTGCTCCAAGTTTCTTTATAAGCTGTACATCACGAGGG
TTGCCTTTTAAAGCAGTTTCGTAGGATTCGACAGCTTGTACTGGTTCATGAATTGACATG
AAGGCATCGCCCATCATTGTATGAGCGTCAGTCATTGGATGGTTACTGACAATATCTTTG
AAACATGAAGTAAACATAGTTCTATCTTTCTTTTCCTTCAAGTAAATATGAGCCATTTTA
CTATGAGCTTGAAAGTAATAGTGCTGCCCAGGCTTTATTTCATTTAAAATATCAATTGCA
CCATCAACATCGCCTTTCTTTAGAGCCAAGTCAGCACGAGATATCAGCAGACGACTCTCT
TCCGAGGTATACGAAAACTCTTGAATTGCTTCCTGCATTGTTTTTCCAGCTTCGCCTAAT
TGATCCAAAGCAGTGTATATATCAATAATTTGCAAGTACAATGTGGCCTTGTCAATGATG
TTCAATTCTGAATCGAATGATCTACTCATGTTACTTTTGCTTGTAGCTATCTGAAGGGCC
GTCAAGAAGCTGGACAACGCATCTTGCAATTTCTCTTTACTTTTTAAAATAATCCCGGTT
ATGAAATGATACATTGTACTATCCCGGACTTTAAAATTATAGCTCAAACATATTTCGAGG
CATTGTTCAGCTTTAGTAAATGCATGTTGCTGTATATAAATTTGCGCTAGTAAGATCTGA
CTGCCAGCATGTGTGTTATCCAACTCAGTAATTTGCTGAGCGAGCTTCTCTGCCTCAGTA
GCATATCCAAAGAGAAATTTCAATTTAGCCAATTCAAACAAACCAGAAATAAGACCAGAA
CAAACGTCACACACAGAGTGTAAGATTTTGAAACATTGTGTGACTGCAGGATTGTTTCCT
TCTTGACTATATAGCAAATAACCAATGATAATAAAGGGTTTCTTTGGTAAATGTTTCTTG
TATTCTTTATAGATATCTAACGCGAAATCTGGATCCAAATCTTTGATATGTGTTAAACCG
AAAGGATTTCGATTGGCTTGCGCTAATTTTGTTTCAAAAGCTGTATTTAGTAATGACGTT
GCATTAGATGCATTTTTAATGTTAAGTTGTGCAGACAATAGATAAAGAAGTGGCATTTTC
TCTGTACCCTGCATTTCAAATAGAAGCTCGATTTGTTGAGCTATCTGATCAGTTGGGCCA
TTCTCCAACATTTGGCAGAGGGTCAATCCACAAAGAGCAGTGATGGAGTTATTATCCAAT
TTACTTGCAGCTCTAAAGAAACTTAATGCATCTTTATATTTTCCCTGGAAAATACACTGA
TATCCAACTTCACTAAGATAATCAACATTGTTAGAATACATTTCTGAGGCATACTGTGCA
AATCTGTATGCTTGAGACAAAACAGCACTGGACCTCCCACAAATTCTGGAGAATATTTGA
GCTGTGTTACAGAATTGATACCCATTGTAGCCTTCTTCAATTTCTAGAGTGCCAAAAAAT
CTATTCAATTGATCTGCTGCTTCTATAAAATCCGAGCGTTTACCAAGTGCAAGGTACACC
TTCGTTTTTAAGCCTTCAATGTTATCTGGATCAATAGAGAATATTCTTTCTAATGTATCA
AAAACAGCATCCCATTTTTTCATAGCAAATTCATTCTTCATCTTCTCAATAAGTGGTACT
ACTTGGCCAGAACTGTTCACAATAAGTTTGTCTAATGTTAAATTTGATGCATCATAATCT
TTTGTTAAATATTTAAATTTTGCAATCCCGAGTAATGCTTCAATGTTACCATCACTTCTT
CTGAGCCCTACTTCCAAACATTCAAGAATTGATTTATGCATTTTTCCTTTACTTAAGCCC
ATATCATTCCAACCCTTGAGTATTATGCCATCTAAATGATTAGGATCTTTTCTAAATGCC
TTATTCAAATATTCAGATGCTTTTTCATTCATTTCTGTTAGATACAAAAACAGAGCTGCA
TAATAATAAGATGTTGCACTGGCATATTTCTTTTCCTCTTTTAGTTTGGATTCTAAGCTT
ACAAGGACTTCTTTTTCCGGTGAATTAGAAACTTTGTAGGCATAAATGAGAGCAATGATG
ACTGCCAACTGAAGTTCAGTATCTGATTGTAAAGGAGTTAATTCGGAGATTCCTTTGTGG
AGTTGACCTTCCAGTATGTTTGCGACTCCGATGTAAAATGAAAATTCGGAAGTCCTAACA
TTTTGCTGCAATGCTTCTTTTGATATTTTCTTAGAACTACCATAGTATTTTTCACGTAAA
TAATAATGTATATTACATCTCTGCCACATTAAATCCATTGTTACTTATTCTAAATCAAGT
TTAACATTCAATACTTTATATTTATTGACGTTGTCTTCATAGAATTTAGCCAAAAAGTGA
CATTTGCATATCACACTCAGCCTGTTTTCCAAAGCATGGTCAAATGCATACTGCGCTAAC
AATTTTCCAACACCTTTCCCTTGAAATGCTTTTGGCACATTTGTATGTACCAATGTTATA
CCATTACCTTTCTTCTCATAACTGATTACAGCATCTTCTGCCCCTTTTATTGACACAGCA
AACTGTTGCTTAGCAACATTGTTGACAACTTTCAGAGCTTCTGTGGAAAATGCTCGAGCC
CTTGTTATCATTCCAGACATGAGAAATTATTTTCCAATTAATGCACTCAAACAGAAAAAA
CACCGAATTTTACTCACTCAATTCAAATAACAGCACAATGCGCCACAGTATTCAGATTTT
TT
(4562 bp)

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