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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11295c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cyclic_AMP-dependent_transcription_factor_ATF-6_beta-like_[Papilio_machaon]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0007165 P signal transduction
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0032993 C protein-DNA complex
GO:0035497 F cAMP response element binding
GO:0036500 P ATF6-mediated unfolded protein response
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
Transcript
Level		FPKM:7.35 TPM:7.20
ORF EntryO_TrvaFAMAMG13007_5prime_partial:A_TrvaFAMAMG_TR11295c0_g1_i1
Sequence
(Nucleotide)
GCATCCTGTATGCCGTCAGCAGTCGCCGAACTTTTCTATCCATTAGTATAATTATTAATA
AAATATTTAAAAAAAAACTTTTTTTAATAAATCTCTGATGTCGAAACAATGTTTTAACTG
ATTATATAATTGCACTATACACTAAAATATAGCGTATAAAAATATAAGTACTAGTGCTAA
AGACAATAGTTTTACAATATAAAATAAAATATTAAAAACGGTAGGTAGCTGAAATTGTTT
GGAAATTGAAAACTAATATTGTTACCTAAATGTACATTTGCTTTTTGGTTATTTTATGTG
GCACTATTACTTGATTTTTTAGATTCTACGCGTTTAACTTTTTGGATTCTCTTAACTGGC
TTTAAATCTTCCTTTGAAAATAGATAATTGGACATTATATCATAATCTAGGTTTGTGGAT
ATCTTATTTCTATTTGGTACATTATTAGGTAAATTATTGCTTGCATTTTGTAGAACTTTA
GAGAGACTAGCATCGATTGTGTCCTTGTTCATTGTTTTGTTTTCTATTTTGCCATAGTCT
GGTTTGTGAGTTTTTTGTGTTGTTTTCCTCAAGCTTTCAGGGAGCGCGTCGGAACGAAGC
TTAACTAGTGTTGTATTCATTACTGAACAATCTATTTGCATCAATGTAACATGGTCGCTC
AGTATTGAATCATTGCCATTTCTTGCGGGTAGAATAAGCGCCATTTTGGGCGGCCGAGTG
ACATTGTGCGAAACGGCCGGTAACAGTAAATGTTCGCCTTTTCCAACTCCTACTACATAA
AATGTGTCATCGCGTCTGTCCAAAGCTTGCAACAAGCTATTCCACTCCCCAAAATCATCC
ATGTTAATATCGTTTATAGATTTTCTAAGTGGCTTTGTATATAAATCGTAATCCATCACA
GCATTGTCATTGTACTCAATGTCTTTATTCCGTTTCAGTCGTCGTAATCTAGACTTGTCC
CTGATATTCCGTCCTTGATTCTTTGTACTATGGAAATCTATGATGTTTGCTTCTAAATTG
AGCTTGCTGAATAATTTATATGTTTCTAAAAGTCCACCATTTAGTTTTTCTTCACTAACA
TAGGCA
(1086 bp)

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