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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11293c3_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_34-like_[Bombyx_mori]
Ontology
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
Transcript
Level		FPKM:3.40 TPM:3.33
ORF EntryO_TrvaFAMAMG12993_5prime_partial:A_TrvaFAMAMG_TR11293c3_g1_i2
Sequence
(Nucleotide)
GCGGGTCGGCGTGCGGGTCGGGCGGCGCCGTGCGCGAGGAGCTGGGCGCGGCGCTGCGGT
GGGCGCGCTCCCTGTGCCGCACGCTGCGCACCCGCCGCGACGCCAAGGAGGCCCGCGCGC
TGCTGCTCGCCTGCAAGGACTGGCCCGAGTGCGCGCGGAGACTGCTCACCATGCTCAACC
TGCACCATCGGTTCGATCACTTGAGGGAGGCCGCTCTAGATGTGCTTCGCGAGTTGTTAC
TGATAGGAGGCGCGGCGGCGCTGGCTGCGCTGGTGCCGCTGGCTGCGGGGGCGCACTGCG
CGGCTCGCACGGCGCCGCCGCCGCGACACAGACACTCGCACCAGCCGCACCCGCACGCCG
CCGCGTACAAACCCTACCACAGGTTCATCGATTCATGTTGTCGTGTGGCTCGAAGTCAAC
GTTGCATGTCGGAGCAGCTCGTCCTCCTGTCCGCTCTGTGCGCGCTCGAGGCCGTGCCGC
TCCGGTTTAACTACTTCGCTGTCTTCTGGAAGGAGGTCGCTACCTCACCGGCCGAAGCAA
AACTAGAAGAGATGTTGTTAGATTGTAGCGTTTTAAATGAATACATTGACGCTATTATAC
TGGACGAGCGGGAATCTTTAGAAGATGATCATATTTACGAGTTCATGCAACTGTACTTAC
CAAAGGCTCGCGACCCGGGCTGCATCGGCATAGCGGAGCCGCTGGCGGAGGAGCTGCGCG
GGTCGGAGGCGTGCTCGGGCGGCGTGCTGGGCTGTGTGCGCGCGCTGCTGCTGGTGGTGC
CGCGCGCCCGCCTCGCGCCCCCCGCGCCGCCCCTCGCCGCACGACACCTGCTACGCGCCG
CCCTGCTCGCCAAGCAGCGACTGCAGCACGCGCCGCCGCCAGAAGAAGAATCTGAACCCG
AAACGAGCAGAGAGTGTCCGCCGGAGACAGCCGCGTGTCACACGCCGGAGGGGAGCGACG
CGGAGGACGTGGAGGAGGGGGGCTTCGGTCCCGACGAGGAGCCGGATGAGGAGGGCGCCG
CCCCCGCGCCCGGCCCTCTGCTCCGCCCCGCCGAGTACCGCGCGCAGCTCGCGCTCGCAC
TCAACACGCTCGTCGACATGCTGCAACACATGCTCGGAGAAGAATAGAACTCGCTCCTAT
ACCGATATTGGAGACAGCGGACGATCGCGCGGATACAGTTATCAATAACTCGTGGTTTGT
TAATTTTTTTATTAGATACTTTATGAATAGTGATGTGATAAAAAAAAAAGGAATCAGTTA
CTTAGACAAAACTATGTTGTCAACAAGATTTGTAGTTAGCTGTGTGCGTGTAGTTTATTA
GTTCTACATAACTTCTAATTTCCAAACCCTTCAAACTTCGGAATATTGGAATTAGTAAAA
GAGTATGTATTATATTTATTGGTGTTATCATTAATTTAAAGACACAATCTTGTCATTTTG
AGGTAATTTAATGTAAAAGCTTGACAAAATACCCAAAAACAAACTAAACTCAATTGAATT
TTATACACATGTCAAAGTTCAAATTATTTCTGTTTAAGATTAAATCTCAAATTGGTTGCA
AAAATGTTGATAAAAGATTACACACATCGAAGTGTACATTCCAAATTAAAATAGTAAAAA
AATATTAATTCAGATTTTATTGAAAAATATGATTTTGGTGTTAGTGAAGTATTTCAATAC
TGTATAAATATCTACATAATAATTATGTAGATATAATAATAAAACACAATAATTGTAAGT
AATACTTCACTGTAATTGGTGTGTGTAAACTTTATAATTAACTCATATGGATTTTATGTA
TAGAAAATATATTAATATATTTGTTTTATCGGCAGCCTATAAGATAAGATGTTAATTTAT
AAGGATATGTGTATGGAAAAACAAGTTTTTATGTAAGAATATCGTATGGTGTTTTAGGTC
CATCTATAAAGGTGAAAACTTCAAAAAGAATTAGTCTTGAGATGGGCCATTTATATTCAT
TTTCATCCCTAAACATTGATCATTTTTAGAGTAATATTGATGTCACTAAAATTCTTGTAA
TATTCTATGTAAGCACAAAGCTTTTGTTAATTTTTATTTGCATTTCCAAATTATTTTTGA
TTTGCGTTAATGTGTTGTGAAAGACTGCTCTTCAGAATATTAATATGATTATGTTTTTAG
TTTAGTTTAAAAAAAACAGTAATTAATAATTTTGAA
(2196 bp)

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