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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11290c0_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pericentriolar_material_1_protein_isoform_X5_[Bombyx_mori]
Ontology
GO:0000242 C pericentriolar material
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0016020 C membrane
GO:0022027 P interkinetic nuclear migration
GO:0030030 P cell projection organization
GO:0031122 P cytoplasmic microtubule organization
GO:0031965 C nuclear membrane
GO:0034451 C centriolar satellite
GO:0034453 P microtubule anchoring
GO:0034454 P microtubule anchoring at centrosome
GO:0035058 P non-motile cilium assembly
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0043234 C protein-containing complex
GO:0050768 P negative regulation of neurogenesis
GO:0051297 P centrosome cycle
GO:0071539 P protein localization to centrosome
GO:0090316 P positive regulation of intracellular protein transport
GO:0097150 P neuronal stem cell population maintenance
Transcript
Level		FPKM:6.52 TPM:6.39
ORF EntryO_TrvaFAMAMG12946_5prime_partial:A_TrvaFAMAMG_TR11290c0_g1_i5
Sequence
(Nucleotide)
TGGAATTATTGAATGTAATAATTCTATGTATAATGCTGAAAGTAAAAATTCTTTTAGTAG
GTATCTTAATGTTATTATCGGTTTTGATGATATGCAATTAATGGCAGACATGTACAATAT
AGGACATGTTGCATTACCTCTGTGGGTGTGACCTCGTCCGTGTCCACCACATCGGGTAGG
GCTTCGGCGTTGGCTGCGGCTTCCTCTCCTTCCCCAGTACCGCTCTCATCCATGTCGACG
TGACATGTTTGATCAGCCTCTGCTAAGTCGCCATTATGCATCTCCGTACAATTGATTAGA
TCAACTTTGTTATCTTGATTAGGATGTGCTCCTTCATTCATATCAGATTCCATATCAATA
TGAAGATGGCCAGGCCACATTTCGTAGGGACACGCGTTAAGTTGGTGCAACTGACTATCA
CTCGAACTAAATAAATTTAGAGATCCTGCTACATCTTGTGTTCTTGTAGAATCTAAATGT
TCGTTACTCCTTGGAGTTGTTTCAACGCTTGCTGCTATGTATAATGGTAAATTTTCAATG
ATGTCATTTGACACATCAGAAACGCGCATTCTTTCATACTTAGAAAGAAATTCCTGAAGC
CTTCTTTTAGCATGTTGCAAATACCTTAAATCTGGCGAAGTATTTATAATGTGGGATGCC
AAAGTGTCAAGGAAATCTGTCGTGCATAATTCATCACTTTTCATGATTAAAAATCTAATG
ATTGTGTTATCAATCGGGATTGAGTTGGTAGACATATTTGGTAAGGAAACCGCACTCAAG
CTGTCGTTATAGTTTGTTTGTTCCGTTGCAGCAGTAACGGATTCAGAGATTGGTGATTCT
TGACTCTCTTCGCCAATCTGATTTTCAGGCATCGTGTTGTATTGAGAGAGTACATTGCGA
ATGGATTGTAATACTTTTTGCCGTACATTTTCAGAACTAATTAATTGTAATTCTCTGAAT
AGTTGTATTAGAAAATCAGGATGAGACTCGTTGACTCCAATGAGTGTTGTCACTTCCGAA
TATATGTTTTCCCTGAGAGGATCAAATAGTTTCGATGTAGCTTTTTCTTCATTTTCACGA
CTAGTAGACGCTAAGTTGGGGTTTGGTGTTTGTGATAAGCTTGCAATATTAATATTACTT
GTTTGTGAATAATCTAAAGGACTGTTTTTGCGATTTGATGAATTTTTCGCAGGTAGTTTT
GAGGATGATTTCCGCTTGCTATTTGTGGAACTGTTCAAGTTATTTGAGTGTGATTGAATA
ATCTCAGGTATTGGATTTGTGATGTTCAAATTCCTAAACGATGTTGTTGGTGCACTTTCT
TGTCTGTTTATATTGACGTTCGGTATGTTTACAGAATTACTTTCGTCTACGTTTCTAGAG
TGCGATGCCCCATCTACATTTCTAGAATGAGATGCAACTGTGACTTCGGAGTCAGCATTT
TGATTGACATTCAATACATCTGGTGCAGATGAAAACGATAGAGATCGTTCATAAGACATG
TTTCTTCGTGTGGTACGGTTCGGGAATTCCTCGTTAGTTGGTTGTGGTGTTTGTGAAACG
TTTTGCGTAGAACTAGTAGTGTTCGTATTTCTTTTTGGGGTCACACAAGGGGAGCTGGCA
GACGGAGTACGACGCAATGTGTTATGAGATCTTTCAACTAACGGATGCGGGTTGTGAGGG
ACCCCGGCACCCAAGTGTCCATCTGCATTTACTTTATTGTTTGCCGAAAGGAGATTCTGT
CGGGAATAACTTCTAAAGTTATCCCAGTAGTTGTTGGCTCTGTTCCCCGGAGGTACTTGG
TTGTTGAGGGTGTGCGAGGCTGTCTCAGATCGCCAACGTTCCTCCAAATGTGTGATTTGT
TCCCTGAGTTGGTGTATGTCTCTCTGCTGCAACACTAGTTGTTGCCAGCACCACGTGCCC
CACACGCCGCAACCACAGCCGCACCCGCCCACCATACCATAAGGCATCATCATGTTGAAG
GGCATGGTGGGGGGGAATGTCATTTGCGGCGTCCCGAGCAACCGCTCCATTGTTTGCGAG
TGACTGTTCTGAGTGAACTGATTTGATCTTACATCTTGATTAGATTTTGTGGTGTTCCAG
CAAGGCGGCGGTAGATGTGGATACGGCATACTTCCAGAGTGCTCAGGATTCTGAGTGATA
GGCGGAACCATGTTGACATTAGAAGGCTCTGGTCTAGGTTCATGTCTAATACTTTGACTT
GTATTGTTTGACTGGGATGCACTCTCATCAGTTTGCCTTTCTTGTGTCAATCTTCGTCTG
GGTCGGTTTCTCTGATTTGATTTGTTTCTTGATGCAGTATCACTATCACTTCCATATGTA
CTCCCAAGATGCGAAGGAAGAGTGGGAAGTGATCTTGCATCTAACACACTGTCACCACCT
CCCCTGAAGTTTTCAGTGTCTCTTGAATTCTGCATCTCCAATATTTGCTCAGATCGAGAA
TCAGGTTCATCTTGTTCACTGTTGTACGATTGATTGACTACTGATGCAGTACGCGATTCT
GGTTTTGGCTGTTGACTTTCTGCTCCAGTGCATAATACTTTCTCTTTGTTGAGTAGTGCT
TCAAGTTCTCGTTGTTTCTCAGCGAGTAGCGCCCGCAGCTGCATCTGTCGTCGCTCGACG
GGCCCGGGCGCGCCGCTCGGTCCGGCTCGCACCTCTTCGTTCACTTTCTTTTGTTTTCGG
ACTTCCGTTTTATTAGAGATCATATCTTTAATTCTTGCTCGTTCTCCCATAATTTTCTCA
GTCTCCATACGCAGCTCTTGTGCCAACTCCTGCAGTGAAGCTAAATTGGCTTCGTGACTT
TGTTGCTGCAAATGTTGGTGTTGTGTTGGATGTTGTTGTTCGTTAGTGAACTTGTGTCGT
TGCGGTATTGTGTTCCTCAGTCGACACATGCTGCCCTCGTTAGACCATCCTCCGATACTG
CCTCCGCCTTCAGATTTATTGTCGTTTATATTAGAATGGCCTGCAACTTCTCTGTATGCG
GCTTCATGTGAAGCAGGAGTGTGATCAGTCTCGTAGTTTTCAACCGATCTCATCAGATCT
TTAGTTTTTTGAAGCGCCGTTTTAATTGCTTTTATTTCCATGAGTTTAAAAGGATCTTCG
TTTTTATTGTTGTTTCCAGATTTCACGCATTTACGGACTGGTTCATCTTCAGCGCTTTCT
TCGCCGGAGCTAGAGTATGTGTTGAGAGCGGGTGGCATACGAGTCGCCATTTGTAACTTT
TGAAACTCCGTTACCAAGCTTTCCATATGTTGTTTCTTCAG
(3281 bp)

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