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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11290c0_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pericentriolar_material_1_protein_isoform_X5_[Bombyx_mori]
Ontology
GO:0000242 C pericentriolar material
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0016020 C membrane
GO:0022027 P interkinetic nuclear migration
GO:0030030 P cell projection organization
GO:0031122 P cytoplasmic microtubule organization
GO:0031965 C nuclear membrane
GO:0034451 C centriolar satellite
GO:0034453 P microtubule anchoring
GO:0034454 P microtubule anchoring at centrosome
GO:0035058 P non-motile cilium assembly
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0043234 C protein-containing complex
GO:0050768 P negative regulation of neurogenesis
GO:0051297 P centrosome cycle
GO:0071539 P protein localization to centrosome
GO:0090316 P positive regulation of intracellular protein transport
GO:0097150 P neuronal stem cell population maintenance
Transcript
Level		FPKM:5.83 TPM:5.71
ORF EntryO_TrvaFAMAMG12944_5prime_partial:A_TrvaFAMAMG_TR11290c0_g1_i4
Sequence
(Nucleotide)
AGACACTTGACAGTTCAAACTGAAGGAATAGGGTGAAACCAGATTTTTATCGAGACAAAT
CGTTTTTTCAACGAAAGCCGTAAACAAAAGAAGAAGAACCGGATTTTTAAATTCTTTGAC
AGATTTTACACATTGCCTCCACAGACGGTTAATTCTTTGATTACTTGGTAATTATTAAAA
TTGCTTTAGGTTTGATTCGGATCTTTCATTACTTACTTTCTTAATTTTTTTTAACATTAA
CGTGATCTTTAATTGAAAATTTCACCCTAATTCGATAAGTCAATGGCAAAATCAGGACAT
GTCAAAAGTGAAATTATTGACATTTGACAGTTCATCAAGCAACAAAATCTGACAAAATCG
CTTCCCCGCGCATACTGCCAAAACTGCAAATCACGTTTTCGGATTTCGTTAGAGGAAAAA
CACTGGTTTATACCAAATATTATTAACAGTTAATAGCTTATATACTCTTAGTGAAAAGTA
TTCTAAAAATCTCAGTAAACAGCATCTATAAGAAGAAGTAGCTGCCTTTTGAGAGCGAAG
ACTGGAAGAGGACACTAAACGTTATTAATCGCAACAGAAGCAGTGGCTAACGCGTTCTGC
ACGTTTAGAATATCAAATTAATTTACTGAAACAGTTCATGATGCCAGCTAACAGCATTGA
GTCATGCCTTCAGAGTACTAGATACAATTTTGATGCTATCAGACCTGCCCCCGTTTGTGT
TGACGCTAACCCTGGAAGCCGATGTCACAACATACATATCTCCACAAATTGTTACTATGG
ATTCCATGAAGCAAAAACAATTACAAACCACGTGACCTCCGATTGTGAAATGCAAGAAGT
TCCAATAGAAAAAAGCGCCGACACAGCGATAACCGCGAAAAAGAGAAGCGCCGACAACAG
TGGATACCCTCAGAGCAAACGTTTTCGAGAAGGTAAGCTTAATTCTAATTTGAACATGAA
CATCACTGAAGGTGCTCAGGGTTAAACAAATAAACTAATGTGTATATATTGACTGATTTT
CAGTGATGTTCATAATTTTCTAGTTTCAGAGTCTAGTTCTTAATTAAATTTAATTGTTTG
CAACTATGTCTGAAACTTGACAATAATGTACCAAATGTATTTATTGACATGCCATTGATC
ATACATGACAAAAGTTTTAGAAATTACAAAGTATCATTTTATTACCTGACTGTTCTTTCA
TAGTTGTAAACTAAAACAGCTTGTCTTCTCGCTGCAGGAAGTCTTTATAAAATATTAAAG
CATTCAATTTTAAAGATTTAAATACAAGTTTTTATATTTTACAAGTTTTGTTGCGGTTTC
ATGATTTTGGCTTCTTAGGTTTTTATTCAAAAGAGAACAAATGTATGTATATCAAAAATT
TATTGTAAAATATTTTATTAAGTGAAAAAATGGATACAGAATTTCAGGTTTGAGTTAACA
TAAATTTGAGAATTTAAATAGATATCAATGATTGTAAGTCAATCAAATAAAACAGATTTT
TATTATTTTTAATTGTGCAACATTTATTAGTAAGTTTAGGATGCACATTTGTACAGGTAA
GTGCCTGGAAATTATTTTACCGTGGAAAATGTAGGTTACAGGAGCATGGGCAGGGCAGCA
TTACAACAATCAAGCCATTCAATATATTAATTGATTCTTTTGGATTTGTTTTAGCGATCA
TCAAATGGAATACCAAACTTTGTGTAATCGCACTTCTATAAGAGTTCTAATCTCACTGCT
TGCAGCTCTGGTACTATTAATAAATGTGGGAAATCAGGTTTTATGGATGCTGGAGCTTTA
ATTTCACAAAAAAGCACAAAATATTTGAATGTTGTCTTAAAATGACTACTGGTTTGATGA
AATGGTTAAAAATGATGGATGATAAAAGATTGTAATCCATTCAGGATTTACATGTTACAC
AAACCAGCTACAATTAAAGAATCATGAAACTGCAACACTGATGCACCACAAGACTTCCTG
CTGAAAGTCTTGTTTCTTGGTGTGATAAAAGTCGAATTTATTTCAGAGGTAATGGTGCCA
ACATCCACCAACAGCAACCCCTGTTTACTTCGACCAACACACAACAATCCAGATATTTCT
CGTTGTCTCATGGTCCATATGATATAATTCTATTGTTGTAAACAAAACAAAAAATATTTG
TATTAAGATATATCTTCATTTTATCTGCAGAGGTTCAAAAAAAGAAAGGCATTGGACATG
AGACATACGAGACCTCAAAATTAAATTCAGAAGATATATTGGAAAATCTTTTCTGGAACA
TACATGGTGGACATTATTATAGTTATCTACACTGTGCTTCTTTGTGATAGTGTGATATTC
TAAGTGAAGTGAATTGGGACTCTTAAGTACATACATTTCAATTTCTGAATTTCATGTTTT
CTCATATTTTTAAGACTTAATAAAAATGTATTAAAATAGGGGGATTGTTTTATTTAAATA
ATTAAACCATTAATATCCATTTATTTATTTAAAATAAAATATAGCATTACACAAAGAACA
CGCAAACAAATAACACACCTCACAATTCTATAATGATAATTAAATAATGATCTAGCAGAA
CATAAAACACTTTAGAATTATACATAAATGGATCAATAAAATCTAAATTTGTTGTGTATT
ATTTTTATGTTTCAGGTGCAGACAGAAGATTTAATATTTTTTTTCAGGTTCACTCAAACA
CTTAGACATCATTAGAATATATTGATGTAGTTTGAGTGTTTGTTTCATTATTACACAATA
ATACAGATTTTCTTCTATTTTTCAGGTGTTTCTTCCATGTGGAGTCTTGTTGGCACACAG
TCAAGACCAAGCCACTCTGCTTCTGCCTCTGTGGGTGTGACCTCGTCCGTGTCCACCACA
TCGGGTAGGGCTTCGGCGTTGGCTGCGGCTTCCTCTCCTTCCCCAGTACCGCTCTCATCC
ATGTCGACGTGACATGTTTGATCAGCCTCTGCTAAGTCGCCATTATGCATCTCCGTACAA
TTGATTAGATCAACTTTGTTATCTTGATTAGGATGTGCTCCTTCATTCATATCAGATTCC
ATATCAATATGAAGATGGCCAGGCCACATTTCGTAGGGACACGCGTTAAGTTGGTGCAAC
TGACTATCACTCGAACTAAATAAATTTAGAGATCCTGCTACATCTTGTGTTCTTGTAGAA
TCTAAATGTTCGTTACTCCTTGGAGTTGTTTCAACGCTTGCTGCTATGTATAATGGTAAA
TTTTCAATGATGTCATTTGACACATCAGAAACGCGCATTCTTTCATACTTAGAAAGAAAT
TCCTGAAGCCTTCTTTTAGCATGTTGCAAATACCTTAAATCTGGCGAAGTATTTATAATG
TGGGATGCCAAAGTGTCAAGGAAATCTGTCGTGCATAATTCATCACTTTTCATGATTAAA
AATCTAATGATTGTGTTATCAATCGGGATTGAGTTGGTAGACATATTTGGTAAGGAAACC
GCACTCAAGCTGTCGTTATAGTTTGTTTGTTCCGTTGCAGCAGTAACGGATTCAGAGATT
GGTGATTCTTGACTCTCTTCGCCAATCTGATTTTCAGGCATCGTGTTGTATTGAGAGAGT
ACATTGCGAATGGATTGTAATACTTTTTGCCGTACATTTTCAGAACTAATTAATTGTAAT
TCTCTGAATAGTTGTATTAGAAAATCAGGATGAGACTCGTTGACTCCAATGAGTGTTGTC
ACTTCCGAATATATGTTTTCCCTGAGAGGATCAAATAGTTTCGATGTAGCTTTTTCTTCA
TTTTCACGACTAGTAGACGCTAAGTTGGGGTTTGGTGTTTGTGATAAGCTTGCAATATTA
ATATTACTTGTTTGTGAATAATCTAAAGGACTGTTTTTGCGATTTGATGAATTTTTCGCA
GGTAGTTTTGAGGATGATTTCCGCTTGCTATTTGTGGAACTGTTCAAGTTATTTGAGTGT
GATTGAATAATCTCAGGTATTGGATTTGTGATGTTCAAATTCCTAAACGATGTTGTTGGT
GCACTTTCTTGTCTGTTTATATTGACGTTCGGTATGTTTACAGAATTACTTTCGTCTACG
TTTCTAGAGTGCGATGCCCCATCTACATTTCTAGAATGAGATGCAACTGTGACTTCGGAG
TCAGCATTTTGATTGACATTCAATACATCTGGTGCAGATGAAAACGATAGAGATCGTTCA
TAAGACATGTTTCTTCGTGTGGTACGGTTCGGGAATTCCTCGTTAGTTGGTTGTGGTGTT
TGTGAAACGTTTTGCGTAGAACTAGTAGTGTTCGTATTTCTTTTTGGGGTCACACAAGGG
GAGCTGGCAGACGGAGTACGACGCAATGTGTTATGAGATCTTTCAACTAACGGATGCGGG
TTGTGAGGGACCCCGGCACCCAAGTGTCCATCTGCATTTACTTTATTGTTTGCCGAAAGG
AGATTCTGTCGGGAATAACTTCTAAAGTTATCCCAGTAGTTGTTGGCTCTGTTCCCCGGA
GGTACTTGGTTGTTGAGGGTGTGCGAGGCTGTCTCAGATCGCCAACGTTCCTCCAAATGT
GTGATTTGTTCCCTGAGTTGGTGTATGTCTCTCTGCTGCAACACTAGTTGTTGCCAGCAC
CACGTGCCCCACACGCCGCAACCACAGCCGCACCCGCCCACCATACCATAAGGCATCATC
ATGTTGAAGGGCATGGTGGGGGGGAATGTCATTTGCGGCGTCCCGAGCAACCGCTCCATT
GTTTGCGAGTGACTGTTCTGAGTGAACTGATTTGATCTTACATCTTGATTAGATTTTGTG
GTGTTCCAGCAAGGCGGCGGTAGATGTGGATACGGCATACTTCCAGAGTGCTCAGGATTC
TGAGTGATAGGCGGAACCATGTTGACATTTGAAGGCTCTGGTCTGGGTTCATGTCTAATA
CTTTGAATCCTGAGCACTCTGGAAGTA
(4947 bp)

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