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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11285c3_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_agrin-like_isoform_X3_[Papilio_polytes]
Ontology
GO:0001932 P regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0002162 F dystroglycan binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0005886 C plasma membrane
GO:0007268 P chemical synaptic transmission
GO:0007275 P multicellular organism development
GO:0007416 P synapse assembly
GO:0007528 P neuromuscular junction development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0033691 F sialic acid binding
GO:0035374 F chondroitin sulfate binding
GO:0036122 F BMP binding
GO:0043113 P receptor clustering
GO:0043395 F heparan sulfate proteoglycan binding
GO:0043547 P positive regulation of GTPase activity
GO:0044295 C axonal growth cone
GO:0045202 C synapse
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050431 F transforming growth factor beta binding
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0051290 P protein heterotetramerization
GO:0051491 P positive regulation of filopodium assembly
GO:0070507 P regulation of microtubule cytoskeleton organization
GO:0071340 P skeletal muscle acetylcholine-gated channel clustering
GO:1902667 P regulation of axon guidance
Transcript
Level		FPKM:1.36 TPM:1.33
ORF EntryO_TrvaFAMAMG12910_internal:A_TrvaFAMAMG_TR11285c3_g1_i1
Sequence
(Nucleotide)
GCTTTACGATTTGGATAGAGTGAATGCCGCTTTGAAAGATCTACATTATCAGCCGAGACC
ACCGGCGCCAGAAGAGGCATGTGAAAAAACTTTCTGCCGTTGGGGTGCGGAGTGTGTGTC
TCTCGGGGACGGTCGGGCACACTGCGCGTGTCCCACCTCGTGTCCCACATCGACTGCGCC
TGTATGCTCCACTGCAGGCAGGACGTATCGGAACCACTGCTACCTGAGGAAAGAGGCGTG
TGAACGACGCCTTAATTTACGAGTTAAACATGAAGGAGAATGTGAAGCCGGAGATCCGTG
TTTGAGCGTCACTTGTCCAACGGGAGCACGATGTGTTTCCACGTACGGACAACCAGAGTG
CCGATGTCCCCGAAGTTGTCAGAGAAGGAAACCGGTCTGTGGAACCGATGGAAAGGAGTA
CCCATCGACGTGTCATCTTGACAAGCATGCATGTGACAGTCAACTAAACATTACCATTAA
ATACCACGGAAAATGCGATCCATGTTCGGAGCACGATTGCGCCGACGGAGGAGTCTGTCA
GCTGAATGAAGTACGGTCACCGACTTGTCGATGCGGTCCATCTTGCGATCTAATCGTGCG
ACCTGGCTCTGCTGTATGTGGCTCCGATTACAAAGATTATCCCAGTGAATGTGCATTACG
TAGAGAGTCATGCAGAACTAGACAACAACTAACTATAGCATATAGAGGGGAATGTGCTTC
AGCGCAACATCCATGCGAATCAGTGAAATGCGGGCTGCGTGAGGTGTGTAGCTTGGACGC
GCGCGGCGTGGCGGTGTGTGGCTGTGGCGCGGAATGTGAGGCGGTCGTACGGCCCGTGTG
CGGCTCGGACGGGCGCACGCACGACAGCCGCTGCCATCTCGAACGCGCCGCATGCCTCGA
CAACAGAGATATACGTGTAGCGTACGCGGGGCCTTGCGGCACAGAGAACCCTTGTGCTCG
AGCGTCATGTCCTTGGGGCGGAGCGTGTGTCGTGCGACACGGCGCGGCGCAGTGCGCTTG
TCCGGTGTGCGACGCGACGCTCGCGCCGATCTGCGCCACAGACCACAACACTTATGGAAG
CGAATGCAAGATGAGAATGCATGCGTGTCAAGAGGGCGTCAAACAGGGGGAACTGAAAGT
GCTGTATAACGGATCTTGTCAAACCTGTGCCGATGTCACATGTCAAGGCGGCGGAGACTG
CGTAGTGGATATTGAGACCGGTCGTCCCACGTGTCAGTGCAATCACAATTGTACCGAAGC
ACAGGAATCGGACGTGGTATGCGGCTCGGATGGTCAAACATACCCCTCGCAATGCGAGTT
GGACTCGACAGCGTGTCGAGAACAAAGTGATTTGCGGCTCGCCTACAAAGGAGACTGCGC
AATGTGCGACGGGATCCAATGTTCGTTTGGAGCACATTGCGCTGCAGGGGAGTGTATTTG
TCCGACTGATTGTACCGGAGCCGCACGTGAACCTGTCTGCGGTAGCTCTATGCAAACGTA
CCCCAACGAATGTGAACTACAGAAGGCAGCTTGCAGACTACCTCCGCCAGCCACACTACA
CGTCATATTTTATGGAGACTGCAAAGATCGACTAGCTGTTGTGCCACCTATAGCTATGAC
TACGACCGCCATGACCACGACCGAGGCAGAGGAAGGATCCACCGACGCTGCGGCCACCGA
GCG
(1683 bp)

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