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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11285c2_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_agrin-like_[Amyelois_transitella]
Ontology
GO:0002162 F dystroglycan binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005605 C basement membrane
GO:0005886 C plasma membrane
GO:0007171 P activation of transmembrane receptor protein tyrosine kinase activity
GO:0007213 P G protein-coupled acetylcholine receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030198 P extracellular matrix organization
GO:0030297 F transmembrane receptor protein tyrosine kinase activator activity
GO:0030548 F acetylcholine receptor regulator activity
GO:0033691 F sialic acid binding
GO:0035374 F chondroitin sulfate binding
GO:0043113 P receptor clustering
GO:0043236 F laminin binding
GO:0043395 F heparan sulfate proteoglycan binding
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0045887 P positive regulation of synaptic assembly at neuromuscular junction
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051491 P positive regulation of filopodium assembly
GO:0099601 P regulation of neurotransmitter receptor activity
Transcript
Level		FPKM:0.31 TPM:0.31
ORF EntryO_TrvaFAMAMG12890_complete:A_TrvaFAMAMG_TR11285c2_g2_i2
Sequence
(Nucleotide)
AAAATACTAATTTTTACAGAAAACGAAATCTCTGTAACTATTTCATTGAACTTACTATTA
TGGTGAACCTTTAATCCTTTAATTAAACGATACTCAAAAAGAGAAAATGTCTCCTGTCAT
AGCGGAGACATCTACTAAGCGGCCCGTTTTCCACCTACGTAAGAATTAAGAAAAAGTTTA
GCCTAATGTAAATCTATGTTTACCAGATGTAGTATTATCGGCAGTATCAGTACATTCTCC
AAAGTACGCAACTCTGAGTTGAGGTTCAGCTCTCATCCTGGCCTCGCAAGCCGCCTTCAA
CAGTGCACACTCATGCGGGTAGGTGCGTCCGTTGGTAGCACACACTGGTTCCCGGACAGC
ACCGGCGCACGGGGCGGCACACGAACATGAACCACGACCACACCACGTGCCAACGGGACA
CTGGATGTCCGCGCACGATTCACAAGAACCCATATGCTTGATATGTAATCGTCTCTTTTC
CTTGCAAGCGACGTCTCTTAAGGCGCATACACTGCTATAAGTTTTATTATCGCTGCCGCA
AACTTCTTCTGTTTCCGTTCCGTCTTCGCAATGTTTTGGACAAACGCAGCTGGCTTCAGA
GACACCGTCACTTTCACAAACGGCGTAAAATTCACACTTCTTATTCTCACAGCCGTTGCA
AGGTCCGTCATATAACACATGAACGTCCCGTCTATGCCGGCACGCTTCTAGTTGCAGCTT
ACACCGGTTTCCGTAGGAGATGCCGTCAGAGCCGCAGACCGGGGCGAACTCGTTGGAGCA
CCGCGGACACCGGCATACACCGCGACCACCTGAAGCGATGCACTCGCCACCGTGGGGACA
AACTCGATCAGCGCATACGCCGTTTGACCCACAGGCTCCGGCGTGCAGAACCTTCAGTTC
TCTTCCCAGTAAACAAGCAGCCCGTCGCAGTTCGCATTCACTATCGTGGGTCCTAGAGTC
AGAGCCGCAGACAGGTCTCAGCACGGGCTCGCAAGGCGGTGGACACGCGCACACAGCTCC
TCCGCCTTCCACGCGACACTCCGCCCCGTGACGACACTCCACTTCCGCACACGGATTCAC
TCCAGAACTACACTGTCCCTTAAAAATAATCTTCAGTTGTTTTCTAGCACGACAGCTTTC
ACGGTGCATTTGGCATTCGTTCGAGTATGTCTTCCCATCAGAGGCACAAACCGGGGAAAA
TTCTAGAGGGCAGGGCTCCGCGCACCGACACAGAGGTGCCCTTCGGTCGTCTAACTGACA
CACTTCAGGGTCAGGACAAGTTACTCCGGAACAGGGATCGCACTTTCCGTAGTACTTAAA
AGTGATATTAGTGTTTGACTCGCATGCAGCTCTGCGCATCTCACATTCGCCGGAATAATC
GCGAGCATCGCTGGCGCACAGAGGACGAGATCCCTCGTGGTCCCCGTAACTGGGACAGGA
CGTGGGGCACTTGCAATCGTAAGCACGACCGTCCGCCGTGGGACGACATAACGCTCCCGG
ACCGCAAGTTATTCCTTTACACGGATCCGGTACGTCGCTAGGGAAAAGGTAGCAACCCTT
CGCAGTTGTAACGAACGCGAAAAATAAAATGAGATGGCAAGTGAACATCATCCGGCCAGC
GAGCGTAACTCGCGCCCTTCTTTGTCCACCATCACACATCCTATTTAGTCATTGCACCAT
CGTATAAGCACTTGATGCATTAATAATTAACGAATACCTTGATATGTCTGGTGATATCCC
AAAACTTGCAGATATTTATCTTTTCAACAAAAACACTACTTCATAAAGTTAAATAAAAAA
ATCAATCTAACAACCCCGAG
(1820 bp)

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