SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11285c0_g3_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ceramide_synthase_6-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030148 P sphingolipid biosynthetic process
GO:0031965 C nuclear membrane
GO:0046513 P ceramide biosynthetic process
GO:0050291 F sphingosine N-acyltransferase activity
Transcript
Level		FPKM:2.63 TPM:2.58
ORF EntryO_TrvaFAMAMG12883_complete:A_TrvaFAMAMG_TR11285c0_g3_i2
Sequence
(Nucleotide)
TAATCAAATATTTATCAGCAGAAGTTATTCGAGGAGAGTGGTTGTGTCGTTTTCAATTCC
GATGTGTTTATGGCGTGATAAATATTTGATTATCAGTGCGCACCTGTGGTATTTCTGGAG
CTAATATGTTACGTTACATACTGGATTTAATTTGGACCGATTCCATTTGGCTGCCTCCTA
ATACTACTTGGGAGGATTTGGAGCCGGGACCGGATAAAGTGGTGACTTACAATGATTACC
GGCACCTTTTATACCCTTTGCCGCTCTCCTTGGTGTTGATAGTACTTCGACATGTTCTGG
AAAAATATTGGTTTGCTCCATTCGGAAAGTCATTAGGAATCAAAAACACTAGACTAAAGA
AAGCACCAAATAATCCTACTTTAGAAAATGTATATCAGACATCACCCAAAGTCAAGCATA
AACAATTCATTTTGCGGAACGAAGAGATATGTGCTTTAGCGAAGCAATTGGACTTGACAG
AGAGGCAGGTGGAAAGATGGTGGCGCTTACGACGGAGTCAAGACAAACCCTCGACCTTGG
TCAAATTCTGCGAGAACTGCTGGCGATGCAGCTTCTACTTGTACAATTTCTCGTATGGGA
TGTTTATACTTTGGGACAAACCGTGGTTGTGGGACATCGATCAATGTTATATTGGATATC
CGCATCAGGGTGTGTCCACTGACGTATGGTGGTATTACATGATATCTTCAGCGTTCTATT
GGTCTCTGAGCTTTTCTCAGTTTTGGGACGTGAAACGCAAGGATTTCTGGCAGATGTTCC
TTCACCATATCGCTACCATAGCTCTGTTGTCGTTCAGCTGGGTCTGCAACTTACACAGAA
TAGGGACTTTGGTCCTTCTGACTCATGACTGCGCAGATATATTCTTAGAAGCCGCCAAAG
CCACAAAGTACGCTAGCTATCAGAAACTTTGCGATTTCCTGTTCGCCGTTTTCACTTTGT
TGTGGATAATTACGCGCAATGGAATTTATCCATTCTACATAATCTGGAGCACATCAATCC
GTGCGCCCATGTTGTTACCGATGTTCCCAGCGTACTACATATTCAACTCGCTGTTGTGTT
TACTGCTCGGTCTACACATGGTGTGGACCTGGCTTATATTGCAGCTCGTTTACAAATCTA
TAAGTGCAGGACAGATGGAAGGTGATATTAGGAGTTCTAGTTCTGAGATAAGCGATAGTT
CTCATCACTCGAATCATAACACGCCGAATCGCACTAGGAGTAAAAAGGACACATAGAATC
TACATGACACGATCAACCTCACCGTACCTCTATGTACGTATAAAATAACAGTGGCCTAAC
ACAATTATTTCACCTTGTTATCTATCTGCGGGATGAGTTAAAAAATAACTAGCAAAACGT
GATAAAAACGTTAAATGTTATAGAAAAATTAACACACCTGAAGTTAGCTGCTAAACTTAC
AACTTCTACGATTCAATTTGTCTATGATAAGATAATGACCATAAACAATCATTTTTTGTG
TATTTTTTATGTTTTATTTTAAATAAGTCCAAGTTGTTCTTATTATATTTAGTACATGTT
AAGTCTATCATAGATTTATCACATATTGTTTGTCACAAATCATTGTTTAAGTTTGAAGTC
AACTTGATTGTATTTACATTTTTTTATTATTATTTATCTTTAAGTATTTTTAACAAATAT
TCTGTTTTTTTTACTTTTTGTGGATTTACTTGTTTTCTAACGTACCTAACGTCTGGATAA
AATCCTAGATTTACAAAAACACGATACTAAATAAACCGTGTTAGCATTTATACATTAAGA
CCTCATTGAGACTATTATCAGTAATGATGGGTTAATGTAGCAAAAAGATATACAGGGTGG
ATCTGTAACTTCCCAGCTGATGTGGGGTGAATGACCTCAGAACCACTTATTTTTGGAATA
GGTTAATTTTTTTTTCAATATTGTATGGTGTATGTACGACTAAAATAG
(1968 bp)

- SilkBase 1999-2023 -