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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11280c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_highwire_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0021785 P branchiomotor neuron axon guidance
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0030424 C axon
GO:0032880 P regulation of protein localization
GO:0042177 P negative regulation of protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048667 P cell morphogenesis involved in neuron differentiation
GO:0051493 P regulation of cytoskeleton organization
Transcript
Level		FPKM:0.47 TPM:0.46
ORF EntryO_TrvaFAMAMG12819_5prime_partial:A_TrvaFAMAMG_TR11280c0_g1_i1
Sequence
(Nucleotide)
CCTTGCAAATGGGGCACTGGGCGAATGAGAACGTAATCCTCGGGCCGTTCCATTTGTTGG
CGAGCACTTTCTTGCAGCAGTGCAGGTGGAAAACGTGACCGCATCTGGAGCAGCTTGCAA
CGGATCGGTGAAGCAAATCATGCACATGTCATCGGCGTCTTGTTTCAGTGGAGTGGTGTT
CGGGGCGCCGGGACAGCCGTGCAGGCACGGGAGGCACGTCTGCTCGTCGCGGACGCCGCC
GCACAAGTGATCGCAAGACACAAAATTGCACATACCTGACACTGCTGGTCCGAGCAAATA
TTCCCGATGGTGAGCAAGCCGGATGTTCCACGAGTACCGCAGAAACGGCACACTCCAGAG
GTCGCACTCATATCGGATGCCATAGCAGCGCTCTCATATGAAGCCCCGGCATCACAAACA
CCAGTCTCCATTCCTCGGAATTCGGCCAAAGCCTTCAGAGTGCGTCTGTCGACTAGAAGC
AGGAGCCAAAAAAGCTTGGCGCGACCGCAGCCCTCGTGTATGTCGATACGTATGGCGCTT
TCCTCTTCTTTGCAAATCTGACGTCGATGACTTCTAGTGGTCCGATTGAGATGCAAGAAT
CGGTCGCATTCAGCGCACAGTGGTCCGCAGGTGCGACAGTCGATAACAGCGACGGTAGTT
CCGTCGTCGTGGTTTGTGCACCGTGGTCGCGTCTCAGAAGCCGGGTCGTTGGCGAGATTA
GTGTGATCATCGCCCGTAAGTTCGATGTGCGATTGTTCGCAAACGCACAGCGCTGCCAGA
GCCATCCATACAGTAGAGGAAGAGATGCAGCGTGTCGGGTGACGCTCCGCTTCAGACACT
TGAGATATATCGCGCACGTACTTAACGAGACTTGTACGTGTCTCTGTGCCCCAACAGCCG
CCCAGTTTATCCTCGGCCATATCAGAGAGCATTTTAGCCACAGTCTGCGCGTGTTTCTTC
GTAGTTTCTCCCTTCATGAACCAGCGGCCCGGTGGTACAGGGTTGATGCTGCCTCCCAAC
ATAGCAGTACCGGGCGGCAACCCGGTAGTCAATCCTTTCACCTTCACTTGCACTGTGATG
GCCTTGCCGAGGTAGGCGATCAGGTGATCGAGTAGTGTCACTCTGGTGGTAGGATCGGAG
CCATGATTGACTGCAACGAGCATTCGCTGCGGAGACAGTTCCATTACCAAGCGACGGATC
AGCAATATTACCTGTCGTTGTACGCGTTCGCTTCCAGTGTGAAGTAGGCATAGCAAGTCG
GCGATTAATTCAGTGCGTTGAGCGAGATGAGCTCGCCCGAAGGCACTGCCGCTGAGCGCA
AGGAGCAGTGAAAGCATTTCAAAGCAGTAGTTGTCTTGCTGCAAGCCGATGGGCCTGGCG
GCCTGATCTTCCCAGTCGTTATCGGCCATGTCAGCGCAGAGTAGAGCTGTTTCCCAGTCG
TCACGCACGCGCGCTGTCTCACATCCGATCGCTGTTACTATGTGCGCCATTACTTGTCGT
TGCAGAGACGTGAGTTTTTGTCCAGCGAAGAGTATTCCAACGACGTGTTCCCTGAGGTCG
CTGTCATCACTCACAGAAACTTCGGTTGAGACGGCCTCACCGTCTACGTTTAGTTTCTCC
CATTCCAGAAGCTTGCCGAACACCTGCGAGGTCAACAAACGGAAGACCCTCAAAGTGTCG
GTTTCACACAATCCGTGTAAGACTTGCGCTGCGCTCGCAGCAGCAGCGCTGAGAAGTGCG
GGCACGCTGAGCGCACGCACCTGGCGTACTCGCACCGCCGCCTCCGGGCCGCGGAGCTCG
CAACGCACGTGCAGGGCGGCAGCGGCCACGCGCGGCAATGTATAGCAAATCCAATTAGCA
GTTCTAGTATCAACCTCAACGTCTTGCATGTGAACCATCTCACCGCCACCGTTGTTATAC
AAAAACGACATCAGCAGAGTCTTGTTCGCAGTATCTCTTGTGTTATCGACGTGCACGCTT
ATGATATGCGGGCGATCGTCACGTGACCCTCCCGGGTAAGAGATCTGTATCCACTTGGCC
TTGTTGCGGTCTTCGTCTCCGGACTCCCAGAAGGTCTCAGTGCTTCCGTCGGTGAGCGCG
CCGGCCATGCCTTGTCGTGAGGAGACTGTGACGTCACACCAGCCCGTCACGTCGTTCGAA
CTCCACACGTGGTTCTCCTTGAGATAGCTATGGAAGCTATCATTAACGGCGCCATGCATT
CCCTCCTCGTGTACGCCTTCCTCGGAACGAGACAGAATTTTGCTGATCACACTGAATACT
TGCGATCTGTGCAAGAAAGCGCGATCGTGCGTCGAGTAGTCAAGCGCCCAGCATCGCACG
GCCTGCAGGCTAGCGGCGCTCGCGTGCGGCAGGGACGGAGCGAGGGTGCTCACCGAGCCC
AGGAACGAGTGGAATGCGGCCCTGGAACCGCGCGCTGCAAGACCGCCCGGACATATGGCG
GACGTGGACGCAGTCGGTGATATTATACGGATAGGCTCGGCTGATGCGTTCTCTCCCTCT
CTGTTTTCTTCAATTATTGGAGGCGGTGGTACAATGTGAGAGAATTTCTCCGCAGCGTTA
CAGAACCACCACATCACGTCGTGGGCGCATATCGGCTGGGTAGCCGAACGAAGAAGCCAA
TTCATTGCCTCAAACGCGTACTGTCTAACAATGTTAATCCTGACAGCGGCATCCATCTTC
TCCCTCTGAACGGCGAGGTCTCGTTTAGCGAGCACAAAGCTCAACACAGGTCTGTCCATG
ATCGCCTTCGAGTCAAGTCGTGGCGCTTCGAAGGCTGATAGAGAATTTTCAGCGTTGCCA
GCATCACCTCCACAGATGAGGTTCTTAAGCGCCTTGCTGGGTTCGGCTAACAGTGATAAT
CCAGATCCGGATCCAGGTGGTGGTGGATCGGTCGGAACGATATTGCGTACGAGTGGCGGT
CGTGCTGCGGCTGCCAGGTCTCCACCGGCCTGCCCCATGGACACGGATCGAGGCACTCTG
GCTAAAGACGAGGGTCCTGGGCCAGACTCTGGCATCGGGAAGTTCGGTCCAGCAGCCGCA
GATGTAGAAGCTGCAGACGGCTGCGGTCGTCCCAGCGAGTGGTATCTAGCTGGCGCGGCG
GCCTCGTTCGTCTGTTGAGGCTCGATGAGGGCCCTCAGGCACTGGAAGTGAGGCGCCGGC
TGCCACACGCTCGCCGGTGACGTCATCGCACCGCGGTTCAGTACCTCGCTCAACGGTGAT
GCAGCTGATATCGGCTCTGAGTCAGTGAGCGGAGCCAAGTCGAGTAAGAACATAGCATTT
TCCTTCATTACGTTGTGGTCAACTCCGGGGATCATGTCGAGATGTTCAGTAGACATGGTC
ATCGATGACGCAGACGATTTGGACGCCAACCACGAGTCGCGGCACTTCTCGCACAGAATG
TACCAAAGCTCTTGAACTTGTACAGTTTGTCCGCAAGCAGTCCCGAACGGTTCATTGGGC
GGTTGTTCTGCCTCCCTATATACTCCGGTGCGGTCGTATCCATGTTGAGTGTTAGCTCGA
CATCCCCTGTGCGCGTTCCGCATGTGTGCGGAGAGAGGCGGGGGCACGTTCGCACCGCCG
CACAACTCGCATTGCACTACGTACGGAACCTTGTTCAGTTGACGACGGACGACGCCGCGT
TTAATGCGAACAAGTAGCGGACGCACTTCCTCGGCTGGTGGCTTGTCGATTACTTCACGC
ATTTTCTTATCAGTAGCAGCGGTAAGTTGATCTGCTTCATAAAGGGCGTCCCACAGGGCG
ACTAATGCACGTAATGCGGGCGGCAGTACGTTCACCACAGATTGCGAATTGGATGGATCT
GAGGTGCTGCAATGTGGCTGCACATCGTCTTCGTTAATCGCGACGTCGACTTCAGCTTTG
CGCTTGCGACTCTCGCTGGCTTCCTTACCGGAACGAGTCAGTGTCTCCAATGTTGACGGA
TTTATGTTCAGATATTGACCTGTGCAGGTGACTTCAACTGAGTGTCTCTGGTTGTGAGAT
GGATTGTAGTCGTCGGACTTCCTTGTCACTACGCGAGTACCTTGCTTCGGTAGTTGAGGA
TGGAACTTCAGGAATGCCGCGCAAGCTATTGCGTCGTGGACGATACCTTCATGCCACAAG
AGCGCTGCGAATATGGCCCGCAGTGCTTCAGCCTGCGAGGGGCTGAGCGCGTGTTTCTTG
GCGGGCGGCGGGGCGGAC
(4218 bp)

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