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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR11277c0_g1_i4
Scaffold_id
NCBI non-redundant
(nr)		endonuclease-reverse_transcriptase_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.89 TPM:1.85
ORF EntryO_TrvaFAMAMG12801_complete:A_TrvaFAMAMG_TR11277c0_g1_i4
Sequence
(Nucleotide)
GTTCCATTTTTGCTAGTAAATTAAAACAAAAAGTGGAGAATTTGGAGAATAAAATTGAAA
CACTGGAAAGAGAGAAAAAGAAGAATAACTTGATGATTTTTGGGATGAAGGAAAACGAAA
AATCAAACATGCAGCTCATTGAAACAGTTGTAAAGGAAATAAAACTTTCGGGATTGAAGA
TCGAAAATAACGATATCAGTCAAGCACGACGAGTGGGACGACAAACAGAAAATGGAATCG
GCAGACCAACGGTAATCACCCTAACCACACTTTGGAAACGAGCAGAAATACTAAAAAACA
AAAAGAATATCAGAAATATCTACATAACAGAAGACTTTCCAAAGGCAGTGTTGGAAATAA
GACGTTCACTTCAAGAGAAATTAAAATTGGAAAGAAGAAATGGGAACTATGCATATATAA
ATTACGACAAATTAGTAGTCAAAGAAAATAGACCCAACGATAAGAGAAAAAGATCACCCA
CGCACAGTCCAGACAACCAACATTCAAATGTCAAACCAACAACCAAAGTGAGTCGAGTAA
ATGCCTACGACTTGATGCGTCCACGACTGAACTCATCCACAACAGCCTCTACTCCCAACA
AATAGCAATCAGGAACGGAAAATCGAAACCGAAAAAAAGAAAACAAATATATGAAAAACA
CAGAAAATTATAAATGCAAAATAATCCCCAAGCCGGCTGGTCCCCGTGGGGATTTAGACC
AACCCCCTCTAGCTATACAAAAACACCAAGACAGAAAAAAAATATCAAACACTAATAAGA
ACATATACCTAACCCAATCAAAAAGGAGTAAAACTTGGAACATCGCAACACTAAATGTCT
TAACTCTAAGAACTGAAGAACGCTATTTGGAGATAGAACAAGCACTACAGAATTTTAAGT
GGGACATATTAGGAATTAGCGAGATGAGAAGATTAGGAGAAAGTATCACGGAACGCAATA
ACATAATCATCCACCATAAAGGGGAGATCCCAGGACAAGGTGGGGTAGGATTTCTGATCA
AGTCATCTCTAAAGAAAAATATTATTGACCTAGTTGGAGTAACAGACAGGATAGCCGTGC
TTCATATTAGGGTTCCAAATTACAGAAAAGAATGGGTGATAATACAAATATATGCTCCAA
CGGAACAAGCAGAACTTTCTGTTGTGGAATCCTTTTATGAGGACCTAAGAAAAACTATCT
CCAAGTACCAAGACAAACACTTAATAGTTATGGGCGACTTCAATGCTCAAATAGGAAAAA
AGGAAAATAACAATGAATTTGTCCTCGGGAAATTTGGACATGGCAAAAGAAGCAAAAACG
GTAAAAAGCTGACTGATTTCCTGATGGAGACTAACATGACTGTCCTTAATACTTGTTTTA
AGAAGAATACAAAGAAAAAATGGACATGGATTTCTCCTGGAGGAGAGTACAAAAACGAAA
TAGATTTCATCACAAGTAACTTCCGAAAAGCCTTCTCAGACACAGAAGTCGTTCATAATT
TCAATTTCAACACCAACCACCGTATGGTACGAAGCACATTAAACCTACACCCTCCCAAAC
GAAGTAGGAAAAATTTTGGAAACAACCAATCTACCAACATAAAAATAGAAAAAGAGTTAA
CAGAAGCCATAAGTACATTAGAAGATATAGATCAACAGCTAAAGATAGAGAAAAACGACC
TCGTAGAAATTTATAACAAATTCGAAAAAACCCTAACACAGCAAATTAACAACCCTAGCA
AAGAACAACCGAAACTCAACCAAGAAGTTCTAGATCTTTTAAAGGACAGGAAACAACTTT
TAACCACAAAAATACGCACAAAGGAAAATTCAAGGAAAATTGCAACAATAAGCAAACGGA
TTAACCAAGCAATTAGAAAACATCGAAGAGTCAAACGATTACAAACATTTGAAAAAATAA
TTACAAAAACAGGAGGTGTTAAAAAAGTACTTAAAGAACTAAGGAAATCCGGAGCACCAT
GGCTAACAAACATGAAGAAAAATAACAAAATTGTATCAAAAAGAAAGGATATTGAGGAAG
TAGCTACCAACTTTTATAAATCGCTATATAAAGATGAAGATAATCAAAATAAAGTAGAAT
ACAAAATAATAGAAAAGCAAAATGAAGAGCCAACCATTGAATATGATGAAGTAAGGAAAG
CAATTCTGAGCCAAAAAACCGATAAATCACCCGGTCCGGATAGAATAAATAACGAAATAT
TAAAAGGAACTTTAGAAGAAGTGTGTCCAATCCTGGTTAAAATATTTAACAAAATCCTGA
AAACAGGTATTATTCCTACTCAGTGGCAAAACTCGCATATAATATTAATTTACAAAAAAG
GAGATAGAGAAAATATTGAAAACTATAGACCAATCAGCTTGATTTCAAACATCTATAAAG
TATATGCAAAAGTTATCTTACAGCGTATTACCAACATACTAGACGAAAATCAGCCTATGG
AACAGGCAGGATTTCGAAAAGATTTCTGTACGATCATATCCATACCGTCAAACAAATTCT
CGAAAAGTATAGCGAATACGATAAAAAAGTATACATGGCGTTTATAGACTACAGCAAAGC
TTTTGACAGTTTAAAACACGAAGCAGTATGGGATAGTCTGCGAGAACAAGGCGTAAACCC
AACCTATATTAGCAGTATCCAAAACATCTATACACATAGTAAGGCAAGAATACGACTGGA
AACTTTGGGCAACGAATTTCCTATCAGCAAAGGAGTAAGACAAGGCGATCCTCTTTCTCC
AAAACTGTTTTCAGCGGTATTGGAAAGCTTATTTAGGAAACTAGACTGGGAAGAGTATGG
CTTGAACATCAACGGCATTCGGTTAAATCATCTTCGTTTTGCGGACGACCTGGTGCTGTT
CGAAGAAAACCCGCAGAAACTAGGAAAAATGGTAAATGACCTAGCATCTGTAAGCAAGAA
TGTAGGACTAGAACTTAACGAAGCGAAAACGAAGCTGATGACGAATGCTATGGAAATGGA
AATCACAGTTAGACAGCAAGCATTAGAATTCGTAAAAGACTACACATACCTAGGCCAAAT
CATTAGCTTCGAAGATCAAACTACAAAAGAAATTAACAAGAGAATCGCGACAGGATGGAA
GAAGTATTGGAGCCTGAAAGAAATAATGAAAAACAAAGATTGCAGTCTCACTATAAAAAG
AAAAACATTCGATATGTGCATACTTCCATGTCTAACATATGGATGTGAAACATGGGCTCT
AAATAAGAAACACAGAAATAGACTTCAAAGCTGTCAAAGAGCTATGGAGAGAAGTGTTAT
AGGAGTAAAGAAAAAGGAAAAAATAAATCACGAAAATATTAGAGAAAGGACAAAATTTAC
AGACATTTTAACGAAAATAGACGAAATAAAATGGCGATGGGCAGGACATACCGTACGAAA
TAAAAAAGAGAAATGGAGAAAAATAATAACAAATTGGTATCCCAGAGACGGCAAGCGAAA
TAAAGGTAGACAACACAAGAGATGGGAGGATGAAATAAAGAGAACTGCTGGACCATTCTG
GAGACGTGCCGCTCAAGATAGAAAACATTGGCTTATTATTAGAGCTAGAGGAGGCCTTTG
TCAACAGACACTCTGAAAATAGTATATGTAGTATAGTATATGTTAATTTTTTAAGTATTT
TGTTATTTACATTGTTTTTTATTTGTAGTTGTATCTTATATTGTAGTTTTTCATAAAATA
AAGGCTTTTTGTATTGTATTGTAATCATGAAACCAGCTATGAACCATCAAAGCAAGCTAT
ATCTACCTTTAAAACAATAGAAAACGCAATAAAAACAATTATATCACACTTAAAACAAAA
ACGCCTTTGGCATAACATTACTTAGCTCGCGTACTCCTGCCCTCAAAATAAAGTTAAAAG
TTCTCACTAAATCCAAACATGGGATGTTCGATCGCATAAGATCAGATAATTCTTAATAAT
ATAATATTTAGAAAATAACTGTAATATGATAATATTGAAAAAACTAACAATAGAAGACTT
AGATGTAGTATACATCAATTTAGAAGGAGAAAGATATGAAGATGAAAAAAAAATGTTTCT
ATTAAGAGCACTAGAATATGATCAAAATAGCACATATTTATTTCATAATGAATTTTAAGA
TGCTCTTAAAGCTTTCCATCATCATTGAAGAACACTGAATCAATAACAGAAACCTAGATT
CTAAATTATTTAGCGGTTATTGGAACGAAGTTGCTTATCGCGCGTTGTGAAAGGGGGCTA
GACGGAAAAAATTCTTACGAAAAGTTGTCACGACACTTTTTTGTTTTAG
(4309 bp)

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